RNA–Protein interactions for RNA: ENST00000374198.4

PRPF4-201, Transcript of pre-mRNA processing factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PRPF4, Length 2,787 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4-201ENST00000374198 PARD3BQ8TEW8 1205 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 NSMCE1Q8WV22 266 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 EBF2Q9HAK2 575 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 NOD2Q9HC29 1040 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 HOMER3Q9NSC5 361 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 CTNND2Q9UQB3 1225 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 C4AP0C0L4 1744 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 C4BP0C0L5 1744 aa14.38□□□□□ -0.11
PRPF4-201ENST00000374198 GMNCA6NCL1 334 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 BTBD11A6QL63 1104 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 HMGB1P1B2RPK0 211 aaPredicted RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 IGKV5-2P06315 115 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 AFMP43652 599 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 METAP2P50579 478 aaKnown RBP eCLIP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 VAV2P52735 878 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 SPAG1Q07617 926 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 RBBP5Q15291 538 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 FKBP15Q5T1M5 1219 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 USP49Q70CQ1 688 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 TBC1D31Q96DN5 1066 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 PURBQ96QR8 312 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 LUC7L2Q9Y383 392 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 BUB1BO60566 1050 aaPredicted RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 COBLO75128 1261 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 DNAJC8O75937 253 aaPredicted RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 SNUPNO95149 360 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 DPYDQ12882 1025 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 TSR1Q2NL82 804 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 FAM196AQ6ZSG2 479 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 BZW1Q7L1Q6 419 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 RALYLQ86SE5 291 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 PIK3R5Q8WYR1 880 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 CUL5Q93034 780 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 ITFG2Q969R8 447 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 SRPRBQ9Y5M8 271 aaKnown RBP14.37□□□□□ -0.11
PRPF4-201ENST00000374198 DUSP10Q9Y6W6 482 aa14.37□□□□□ -0.11
PRPF4-201ENST00000374198 AP1G2O75843 785 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 CLSTN1O94985 981 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 DDX58O95786 925 aaKnown RBP14.36□□□□□ -0.11
PRPF4-201ENST00000374198 CASP1P29466 404 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 ELF3P78545 371 aaPredicted RBP14.36□□□□□ -0.11
PRPF4-201ENST00000374198 UBXN1Q04323 297 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 TCP11X2Q5H9J9 407 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 GSDMAQ96QA5 445 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 SLC39A2Q9NP94 309 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 MACROD2A1Z1Q3 448 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 MPHOSPH10O00566 681 aaKnown RBP14.36□□□□□ -0.11
PRPF4-201ENST00000374198 IL2RBP14784 551 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 ZBTB10Q96DT7 871 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 STAMBPL1Q96FJ0 436 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 THOC1Q96FV9 657 aaKnown RBP14.36□□□□□ -0.11
PRPF4-201ENST00000374198 PAGE5Q96GU1 130 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 SEC16BQ96JE7 1060 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 TRPC6Q9Y210 931 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 LEMD3Q9Y2U8 911 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 KDM3BQ7LBC6 1761 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 WDR19Q8NEZ3 1342 aa14.36□□□□□ -0.11
PRPF4-201ENST00000374198 KCNJ18B7U540 433 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 PRLRP16471 622 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 CYLC1P35663 651 aaPredicted RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 MYO1EQ12965 1108 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 KCNJ12Q14500 433 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 CAPRIN2Q6IMN6 1127 aaKnown RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 SH3RF1Q7Z6J0 888 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 ARFGAP2Q8N6H7 521 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 P3H4Q92791 437 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 CCDC47Q96A33 483 aaKnown RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 CSRNP2Q9H175 543 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 CPSF2Q9P2I0 782 aaKnown RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 FAM153BP0C7A2 387 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 PECAM1P16284 738 aaPredicted RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 RXRAP19793 462 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 IARSP41252 1262 aaKnown RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 AIMP1Q12904 312 aaKnown RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 TRAF1Q13077 416 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 QPCTQ16769 361 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 FAM153CQ494X1 144 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 CRELD2Q6UXH1 353 aaPredicted RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 MREGQ8N565 214 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 SPAG5Q96R06 1193 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 NUP58Q9BVL2 599 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 FAM153AQ9UHL3 310 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 BAIAP2L1Q9UHR4 511 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 C15orf41Q9Y2V0 281 aa14.35□□□□□ -0.11
PRPF4-201ENST00000374198 PARP4Q9UKK3 1724 aaKnown RBP14.35□□□□□ -0.11
PRPF4-201ENST00000374198 ENO4A6NNW6 628 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 BTBD18B2RXH4 712 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 FOXP2O15409 715 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 TRAPPC3O43617 180 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 IPO7O95373 1038 aaKnown RBP14.34□□□□□ -0.11
PRPF4-201ENST00000374198 FGAP02671 866 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 MSL1Q68DK7 614 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 C8orf74Q6P047 294 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 IFT20Q8IY31 132 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 SPDYE1Q8NFV5 336 aaPredicted RBP14.34□□□□□ -0.11
PRPF4-201ENST00000374198 OSBP2Q969R2 916 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 CAPN11Q9UMQ6 739 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 GHRP10912 638 aa14.34□□□□□ -0.11
PRPF4-201ENST00000374198 HPDP32754 393 aaPredicted RBP14.34□□□□□ -0.11
PRPF4-201ENST00000374198 MEA1Q16626 185 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms