RNA–Protein interactions for RNA: ENST00000373380.5

CSMD2-204, Transcript of CUB and Sushi multiple domains 2, humanhuman

TSL 2 BASIC

Gene CSMD2, Length 4,379 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD2-204ENST00000373380 PARP3Q9Y6F1 533 aa12.04□□□□□ -0.48
CSMD2-204ENST00000373380 SOWAHDA6NJG2 315 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 SH2B2O14492 632 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 LONRF2Q1L5Z9 754 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 RUFY4Q6ZNE9 571 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 NKIRAS1Q9NYS0 192 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 ECM2O94769 699 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 SLFN14P0C7P3 912 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 POLR2FP61218 127 aaKnown RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 IRX5P78411 483 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 DMTNQ08495 405 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 FBXO38Q6PIJ6 1188 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 U2AF1L4Q8WU68 220 aaKnown RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 CDCA7Q9BWT1 371 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 MMP1P03956 469 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 KCNQ4P56696 695 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 UAP1Q16222 522 aaPredicted RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 ZNF365Q70YC5 407 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 ADAT2Q7Z6V5 191 aaKnown RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 PIH1D3Q9NQM4 214 aaKnown RBP12.03□□□□□ -0.48
CSMD2-204ENST00000373380 MYO1AQ9UBC5 1043 aa12.03□□□□□ -0.48
CSMD2-204ENST00000373380 SOS2Q07890 1332 aaPredicted RBP12.02□□□□□ -0.48
CSMD2-204ENST00000373380 CCDC144BQ3MJ40 725 aa12.02□□□□□ -0.48
CSMD2-204ENST00000373380 PNMA8AQ86V59 439 aaPredicted RBP12.02□□□□□ -0.48
CSMD2-204ENST00000373380 GLT8D2Q9H1C3 349 aa12.02□□□□□ -0.48
CSMD2-204ENST00000373380 ARMCX3Q9UH62 379 aaPredicted RBP12.02□□□□□ -0.48
CSMD2-204ENST00000373380 E7EVH7 732 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 MYCLP12524 364 aaPredicted RBP12.02□□□□□ -0.49
CSMD2-204ENST00000373380 XRCC5P13010 732 aaKnown RBP12.02□□□□□ -0.49
CSMD2-204ENST00000373380 GNGT1P63211 74 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 CEP85LQ5SZL2 805 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 DPP8Q6V1X1 898 aaPredicted RBP12.02□□□□□ -0.49
CSMD2-204ENST00000373380 NLRP10Q86W26 655 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 CCDC105Q8IYK2 499 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 SYNE4Q8N205 404 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 BCAS4Q8TDM0 211 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 MYCBPQ99417 103 aaPredicted RBP12.02□□□□□ -0.49
CSMD2-204ENST00000373380 HYOU1Q9Y4L1 999 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 CLCN6P51797 869 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 PRR16Q569H4 304 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 VSTM4Q8IW00 320 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 ENOX1Q8TC92 643 aaKnown RBP12.02□□□□□ -0.49
CSMD2-204ENST00000373380 NT5C3AQ9H0P0 336 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 PSTPIP2Q9H939 334 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 USP40Q9NVE5 1235 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 LOC102724428A0A0B4J2F2 783 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 CASP1P29466 404 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 LONP1P36776 959 aaKnown RBP12.02□□□□□ -0.49
CSMD2-204ENST00000373380 STAT1P42224 750 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 CYP2J2P51589 502 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 SIK1P57059 783 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 FAM26FQ5R3K3 315 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 FMNL3Q8IVF7 1028 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 UBL4BQ8N7F7 174 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 TTC16Q8NEE8 873 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 CNOT6LQ96LI5 555 aaKnown RBP12.02□□□□□ -0.49
CSMD2-204ENST00000373380 FERMT1Q9BQL6 677 aa12.02□□□□□ -0.49
CSMD2-204ENST00000373380 CYP2E1P05181 493 aaPredicted RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 CYP4A11Q02928 519 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 EHHADHQ08426 723 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 WDR44Q5JSH3 913 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 TTC19Q6DKK2 380 aaPredicted RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 NSMFQ6X4W1 530 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 GOLPH3LQ9H4A5 285 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 SETD1BQ9UPS6 1966 aaKnown RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 H7C1W4 665 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 TCP1P17987 556 aaKnown RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 SMTNP53814 917 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 SETDB1Q15047 1291 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 KCTD16Q68DU8 428 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 UHMK1Q8TAS1 419 aaKnown RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 PSMD1Q99460 953 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 PARD6BQ9BYG5 372 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 ATP8A2Q9NTI2 1148 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 MKRN1Q9UHC7 482 aaKnown RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 TSKSQ9UJT2 592 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 USTQ9Y2C2 406 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 CYP27B1O15528 508 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 DDAH1O94760 285 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 STAMBPO95630 424 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 MCAMP43121 646 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 SCNN1DP51172 638 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 CYP27A1Q02318 531 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 RASSF7Q02833 373 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 NCBP1Q09161 790 aaKnown RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 RASGRF1Q13972 1273 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 LRRC41Q15345 812 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 NUCKS1Q9H1E3 243 aaKnown RBP12.01□□□□□ -0.49
CSMD2-204ENST00000373380 AXIN2Q9Y2T1 843 aa12.01□□□□□ -0.49
CSMD2-204ENST00000373380 CHGBP05060 677 aa12□□□□□ -0.49
CSMD2-204ENST00000373380 CTNNA1P35221 906 aaKnown RBP12□□□□□ -0.49
CSMD2-204ENST00000373380 NAA35Q5VZE5 725 aa12□□□□□ -0.49
CSMD2-204ENST00000373380 KIFAP3Q92845 792 aa12□□□□□ -0.49
CSMD2-204ENST00000373380 PPP1R12CQ9BZL4 782 aa12□□□□□ -0.49
CSMD2-204ENST00000373380 DPH5Q9H2P9 285 aa12□□□□□ -0.49
CSMD2-204ENST00000373380 CRKLP46109 303 aaKnown RBP12□□□□□ -0.49
CSMD2-204ENST00000373380 ADAM9Q13443 819 aa12□□□□□ -0.49
CSMD2-204ENST00000373380 SPATA24Q86W54 205 aa12□□□□□ -0.49
CSMD2-204ENST00000373380 TTLL11Q8NHH1 800 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms