RNA–Protein interactions for RNA: ENST00000370886.9

EXOSC1-203, Transcript of exosome component 1, humanhuman

TSL 5 BASIC

Gene EXOSC1, Length 741 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-203ENST00000370886 GJD2Q9UKL4 321 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 CTDP1Q9Y5B0 961 aaPredicted RBP12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 CYP46A1Q9Y6A2 500 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 LAMA2P24043 3122 aaKnown RBP12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 PLXNB2O15031 1838 aa12.51□□□□□ -0.41
EXOSC1-203ENST00000370886 SH2B2O14492 632 aaPredicted RBP12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 DHX16O60231 1041 aaKnown RBP12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 RPS6KB1P23443 525 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 SLC16A2P36021 539 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 MDM2Q00987 491 aaPredicted RBP12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 TRIM32Q13049 653 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 PLS1Q14651 629 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 COG2Q14746 738 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 TTBK2Q6IQ55 1244 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 SYNE3Q6ZMZ3 975 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 Q6ZUG5 572 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 CCAR1Q8IX12 1150 aaKnown RBP12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 CCDC144CPQ8IYA2 1237 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 DCAF4Q8WV16 495 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 ANKS1AQ92625 1134 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 ATG4CQ96DT6 458 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 GMCL1Q96IK5 515 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 TMEM87BQ96K49 555 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 NUDT12Q9BQG2 462 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 LY9Q9HBG7 655 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 HOXC10Q9NYD6 342 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 SYNPO2Q9UMS6 1093 aa12.5□□□□□ -0.41
EXOSC1-203ENST00000370886 PARP1P09874 1014 aaKnown RBP12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 PDHBP11177 359 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 COL6A1P12109 1028 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 XRCC5P13010 732 aaKnown RBP12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 RXRAP19793 462 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 CYP2B6P20813 491 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 NOVP48745 357 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 SNAP25P60880 206 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 EXOSC10Q01780 885 aaKnown RBP12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 RUFY3Q7L099 469 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 FAM161BQ96MY7 647 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 SLF1Q9BQI6 1058 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 LARP6Q9BRS8 491 aaKnown RBP12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 CPVLQ9H3G5 476 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 CWC22Q9HCG8 908 aaKnown RBP12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 VAT1LQ9HCJ6 419 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 PRDM6Q9NQX0 595 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 PDRG1Q9NUG6 133 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 MORF4L1Q9UBU8 362 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 SLC12A7Q9Y666 1083 aa12.49□□□□□ -0.41
EXOSC1-203ENST00000370886 FRMPD3Q5JV73 1810 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 SPDYE16A6NNV3 312 aaPredicted RBP12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 DSG3P32926 999 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 STAT2P52630 851 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 LRRC26Q2I0M4 334 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 WDR78Q5VTH9 848 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 NOL8Q76FK4 1167 aaKnown RBP12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 ZNF654Q8IZM8 581 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 CPXCR1Q8N123 301 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 TMTC2Q8N394 836 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 GPRC5AQ8NFJ5 357 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 CHURC1Q8WUH1 139 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 SYMPKQ92797 1274 aaKnown RBP12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 BRF1Q92994 677 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 BACH2Q9BYV9 841 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 UBA5Q9GZZ9 404 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 ZSWIM6Q9HCJ5 1215 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 PRKAG2Q9UGJ0 569 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 FEM1BQ9UK73 627 aa12.48□□□□□ -0.41
EXOSC1-203ENST00000370886 KLF18A0A0U1RQI7 1052 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 ZBED4O75132 1171 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 ANAPC15P60006 121 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 ZNF543Q08ER8 600 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 APOBRQ0VD83 1088 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 CCDC174Q6PII3 467 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 MICU3Q86XE3 530 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 PRPF38AQ8NAV1 312 aaKnown RBP12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 MAFAQ8NHW3 353 aaPredicted RBP12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 CTCFLQ8NI51 663 aaPredicted RBP12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 PIBF1Q8WXW3 757 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 TXNRD2Q9NNW7 524 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 RBPJLQ9UBG7 517 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 PPP1R9AQ9ULJ8 1098 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 PRUNE2Q8WUY3 3088 aa12.47□□□□□ -0.41
EXOSC1-203ENST00000370886 WDR19Q8NEZ3 1342 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 EYSQ5T1H1 3165 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 MAPK4P31152 587 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 RGS2P41220 211 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 LIFRP42702 1097 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 NEK4P51957 841 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 SYDE2Q5VT97 1194 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 FAM160B2Q86V87 743 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 STAG2Q8N3U4 1231 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 GTF3C2Q8WUA4 911 aaPredicted RBP12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 MTA3Q9BTC8 594 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 BTBD7Q9P203 1132 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 BRPF3Q9ULD4 1205 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 PRR12Q9ULL5 1215 aa12.46□□□□□ -0.41
EXOSC1-203ENST00000370886 DNAH12Q6ZR08 3092 aa12.45□□□□□ -0.42
EXOSC1-203ENST00000370886 NCOR1O75376 2440 aa12.45□□□□□ -0.42
EXOSC1-203ENST00000370886 GOLGA8BA8MQT2 603 aa12.45□□□□□ -0.42
EXOSC1-203ENST00000370886 KLRF2D3W0D1 207 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms