RNA–Protein interactions for RNA: ENST00000369559.8

HIPK1-206, Transcript of homeodomain interacting protein kinase 1, humanhuman

TSL 1 (best) BASIC

Gene HIPK1, Length 3,424 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK1-206ENST00000369559 TRIM21P19474 475 aaKnown RBP11.2□□□□□ -0.62
HIPK1-206ENST00000369559 KRT2P35908 639 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 DNM2P50570 870 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 DRP2Q13474 957 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 NUP188Q5SRE5 1749 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 CEP85LQ5SZL2 805 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 TTLL7Q6ZT98 887 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 KRT28Q7Z3Y7 464 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 MYCBPAPQ8TBZ2 947 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 FAM212AQ96EL1 285 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 CCT8L2Q96SF2 557 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 PYM1Q9BRP8 204 aaKnown RBP11.2□□□□□ -0.62
HIPK1-206ENST00000369559 TTYH3Q9C0H2 523 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 ODF2LQ9ULJ1 636 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 DISP2A7MBM2 1401 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 TRIM49BA6NDI0 452 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 NUTM2BA6NNL0 878 aaPredicted RBP11.2□□□□□ -0.62
HIPK1-206ENST00000369559 NUTM2EB1AL46 878 aaPredicted RBP11.2□□□□□ -0.62
HIPK1-206ENST00000369559 WNT7AO00755 349 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 RPN1P04843 607 aaKnown RBP11.2□□□□□ -0.62
HIPK1-206ENST00000369559 NR1D1P20393 614 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 CDR1P51861 262 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 CFAP58Q5T655 872 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 CCDC181Q5TID7 509 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 NLRP14Q86W24 1093 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 FANCBQ8NB91 859 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 SHISA4Q96DD7 197 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 STRBPQ96SI9 672 aaKnown RBP11.2□□□□□ -0.62
HIPK1-206ENST00000369559 OSBPL9Q96SU4 736 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 ZKSCAN3Q9BRR0 538 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 NUP58Q9BVL2 599 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 SLC40A1Q9NP59 571 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 CAPN6Q9Y6Q1 641 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 MYH6P13533 1939 aa11.2□□□□□ -0.62
HIPK1-206ENST00000369559 ZNF233A6NK53 670 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 NBPF26B4DH59 902 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 TCP1P17987 556 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 ZNF174Q15697 407 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 CCDC96Q2M329 555 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 AKNAD1Q5T1N1 836 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 C8orf74Q6P047 294 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 NBPF10Q6P3W6 841 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 IQCA1Q86XH1 822 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 IQCKQ8N0W5 287 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 NBPF15Q8N660 670 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 SMCR8Q8TEV9 937 aaPredicted RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 CCDC43Q96MW1 224 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 NAPBQ9H115 298 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 POLD4Q9HCU8 107 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 PIH1D3Q9NQM4 214 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 LRWD1Q9UFC0 647 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 TACC3Q9Y6A5 838 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 CCDC189A1A4V9 331 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 USO1O60763 962 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 FAM107AO95990 144 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 SRGNP10124 158 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 PDE6AP16499 860 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 ZBED6P86452 979 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 HDLBPQ00341 1268 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 IFT88Q13099 833 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 SPA17Q15506 151 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 MFSD6Q6ZSS7 791 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 RETREG2Q8NC44 543 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 NUP133Q8WUM0 1156 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 RNF26Q9BY78 433 aaPredicted RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 CENPHQ9H3R5 247 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 THAP9Q9H5L6 903 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 EPB41L4AQ9HCS5 686 aaPredicted RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 HYOU1Q9Y4L1 999 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 ERICH2A1L162 156 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 SRRM3A6NNA2 597 aaPredicted RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 MDH1P40925 334 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 RCAN1P53805 252 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 SEC24CP53992 1094 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 SATB1Q01826 763 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 PTGDRQ13258 359 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 RRP12Q5JTH9 1297 aaKnown RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 NFRKBQ6P4R8 1299 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 IFNL3Q8IZI9 196 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 ADSSL1Q8N142 457 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 PHF20Q9BVI0 1012 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 SH2D4AQ9H788 454 aa11.19□□□□□ -0.62
HIPK1-206ENST00000369559 MAGEC2Q9UBF1 373 aaPredicted RBP11.19□□□□□ -0.62
HIPK1-206ENST00000369559 B4DLN1 442 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 PATL2C9JE40 543 aaKnown RBP11.18□□□□□ -0.62
HIPK1-206ENST00000369559 CLSTN1O94985 981 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 PAFAH1B1P43034 410 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 ATP2C1P98194 919 aaPredicted RBP11.18□□□□□ -0.62
HIPK1-206ENST00000369559 CDK17Q00537 523 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 GLE1Q53GS7 698 aaKnown RBP11.18□□□□□ -0.62
HIPK1-206ENST00000369559 C6orf89Q6UWU4 347 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 CD302Q8IX05 232 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 ZNF654Q8IZM8 581 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 TMTC2Q8N394 836 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 EXOC1Q9NV70 894 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 SOS2Q07890 1332 aaPredicted RBP11.18□□□□□ -0.62
HIPK1-206ENST00000369559 TIAM2Q8IVF5 1701 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 ZNF263O14978 683 aa11.18□□□□□ -0.62
HIPK1-206ENST00000369559 GCFC2P16383 781 aaKnown RBP11.18□□□□□ -0.62
HIPK1-206ENST00000369559 SNCBQ16143 134 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms