RNA–Protein interactions for RNA: ENST00000359680.9

TRAPPC2-201, Transcript of trafficking protein particle complex 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC2, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC2-201ENST00000359680 USO1O60763 962 aaKnown RBP11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 TACC1O75410 805 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 TRAPPC10P48553 1259 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 CCDC96Q2M329 555 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 TUBB8Q3ZCM7 444 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 SWT1Q5T5J6 900 aaKnown RBP11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 GIGYF2Q6Y7W6 1299 aaKnown RBP11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 RETREG2Q8NC44 543 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 TRIM58Q8NG06 486 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 EHD4Q9H223 541 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 SNX12Q9UMY4 172 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 MROH5Q6ZUA9 1318 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 ADAMTSL3P82987 1691 aa11.1□□□□□ -0.63
TRAPPC2-201ENST00000359680 GRIN2DO15399 1336 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 NUTM2BA6NNL0 878 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 NUTM2EB1AL46 878 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 HSF2BPO75031 334 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 SRGNP10124 158 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 MNAT1P51948 309 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 VAV2P52735 878 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 EPHB4P54760 987 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 NLRP5P59047 1200 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 ZBED6P86452 979 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 CYP27A1Q02318 531 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 FUT2Q10981 343 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 NLRP10Q86W26 655 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 ENAHQ8N8S7 591 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 NOC3LQ8WTT2 800 aaKnown RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 KAT2BQ92831 832 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 RRP36Q96EU6 259 aaKnown RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 ZSCAN10Q96SZ4 725 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 LRRC1Q9BTT6 524 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 LRP2BPQ9P2M1 347 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 TRMT112Q9UI30 125 aaKnown RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 DUSP10Q9Y6W6 482 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 KIAA0754O94854 1291 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 CALM1P0DP23 149 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 CALM2P0DP24 149 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 CALM3P0DP25 149 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 LONP1P36776 959 aaKnown RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 TBC1D8BQ0IIM8 1120 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 SF3B2Q13435 895 aaKnown RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 CCDC181Q5TID7 509 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 TTC19Q6DKK2 380 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 PROSER2Q86WR7 435 aaPredicted RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 GPATCH11Q8N954 259 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 CCDC42Q96M95 316 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 PURBQ96QR8 312 aaKnown RBP11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 SH3GL2Q99962 352 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 TUBGCP2Q9BSJ2 902 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 PAPPAQ13219 1627 aa11.09□□□□□ -0.63
TRAPPC2-201ENST00000359680 SOS2Q07890 1332 aaPredicted RBP11.08□□□□□ -0.63
TRAPPC2-201ENST00000359680 NDUFAB1O14561 156 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 PDE8AO60658 829 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 FGFR2P21802 821 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 MATR3P43243 847 aaKnown RBP eCLIP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 PMS1P54277 932 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 SETQ01105 290 aaPredicted RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 ITIH3Q06033 890 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 IL17AQ16552 155 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 ALS2CLQ60I27 953 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 B4GALNT4Q76KP1 1039 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 IQCA1Q86XH1 822 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 CREG2Q8IUH2 290 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 LRWD1Q9UFC0 647 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 DMGDHQ9UI17 866 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 SAMM50Q9Y512 469 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 BCORQ6W2J9 1755 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 SPATA31A3Q5VYP0 1347 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 HNRNPH1P31943 449 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 NPY5RQ15761 445 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 EZH2Q15910 746 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 FBXW10Q5XX13 1052 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 ARL6IP4Q66PJ3 421 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 EMBQ6PCB8 327 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 CSGALNACT2Q8N6G5 542 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 SPATA4Q8NEY3 305 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 HDAC7Q8WUI4 952 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 SDR42E1Q8WUS8 393 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 DDX17Q92841 729 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 TTYH3Q9C0H2 523 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 DISC1Q9NRI5 854 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 LOC102724159A0A0B4J2E5 919 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 H0YHG0 523 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 EPB41P11171 864 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 SLC7A5Q01650 507 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 KCNB1Q14721 858 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 PWP2Q15269 919 aaKnown RBP11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 HLFQ16534 295 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 TOM1L2Q6ZVM7 507 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 TMTC3Q6ZXV5 915 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 ALS2CR12Q96Q35 445 aa11.08□□□□□ -0.64
TRAPPC2-201ENST00000359680 ARAP2Q8WZ64 1704 aa11.07□□□□□ -0.64
TRAPPC2-201ENST00000359680 TNS2Q63HR2 1409 aa11.07□□□□□ -0.64
TRAPPC2-201ENST00000359680 MYH10P35580 1976 aa11.07□□□□□ -0.64
TRAPPC2-201ENST00000359680 TCP1P17987 556 aaKnown RBP11.07□□□□□ -0.64
TRAPPC2-201ENST00000359680 CYP7A1P22680 504 aa11.07□□□□□ -0.64
TRAPPC2-201ENST00000359680 PAFAH1B1P43034 410 aa11.07□□□□□ -0.64
TRAPPC2-201ENST00000359680 MTIF2P46199 727 aaKnown RBP11.07□□□□□ -0.64
TRAPPC2-201ENST00000359680 SKOR1P84550 965 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms