RNA–Protein interactions for RNA: ENST00000359031.8

GABPB1-202, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 5 BASIC

Gene GABPB1, Length 1,633 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-202ENST00000359031 C9orf131Q5VYM1 1079 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 PPP1R18Q6NYC8 613 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 DTHD1Q6ZMT9 781 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 HOMER1Q86YM7 354 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 RBM46Q8TBY0 533 aaKnown RBP16.88■□□□□ 0.29
GABPB1-202ENST00000359031 CCDC17Q96LX7 622 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 KCND1Q9NSA2 647 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 KIF13BQ9NQT8 1826 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 ARFGEF1Q9Y6D6 1849 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 SMCO2A6NFE2 343 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 GTPBP6O43824 516 aaPredicted RBP16.88■□□□□ 0.29
GABPB1-202ENST00000359031 ZNF18P17022 549 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 FMR1Q06787 632 aaKnown RBP eCLIP16.88■□□□□ 0.29
GABPB1-202ENST00000359031 ARID5BQ14865 1188 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 CFAP100Q494V2 611 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 CC2D2BQ6DHV5 1058 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 LRRC47Q8N1G4 583 aaKnown RBP16.88■□□□□ 0.29
GABPB1-202ENST00000359031 PIGSQ96S52 555 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 DHX36Q9H2U1 1008 aaKnown RBP16.88■□□□□ 0.29
GABPB1-202ENST00000359031 CPVLQ9H3G5 476 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 NFE2L3Q9Y4A8 694 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 WDR90Q96KV7 1748 aa16.88■□□□□ 0.29
GABPB1-202ENST00000359031 SFPQP23246 707 aaKnown RBP eCLIP16.87■□□□□ 0.29
GABPB1-202ENST00000359031 KCNJ6P48051 423 aa16.87■□□□□ 0.29
GABPB1-202ENST00000359031 HTRA3P83110 453 aa16.87■□□□□ 0.29
GABPB1-202ENST00000359031 SUPT20HQ8NEM7 779 aa16.87■□□□□ 0.29
GABPB1-202ENST00000359031 MYRIPQ8NFW9 859 aa16.87■□□□□ 0.29
GABPB1-202ENST00000359031 IDI2Q9BXS1 227 aa16.87■□□□□ 0.29
GABPB1-202ENST00000359031 COL2A1P02458 1487 aaPredicted RBP16.87■□□□□ 0.29
GABPB1-202ENST00000359031 FRMPD2Q68DX3 1309 aaPredicted RBP16.87■□□□□ 0.29
GABPB1-202ENST00000359031 SYNRGQ9UMZ2 1314 aa16.87■□□□□ 0.29
GABPB1-202ENST00000359031 CAPN15O75808 1086 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 ZNF543Q08ER8 600 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 NEK8Q86SG6 692 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 VSTM4Q8IW00 320 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 AK8Q96MA6 479 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 CCSER1Q9C0I3 900 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 DISC1Q9NRI5 854 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 RMND1Q9NWS8 449 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 SERPINA10Q9UK55 444 aa16.86■□□□□ 0.29
GABPB1-202ENST00000359031 STAT6P42226 847 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 NFIAQ12857 509 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 CUL4BQ13620 913 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 GPATCH4Q5T3I0 446 aaKnown RBP16.85■□□□□ 0.29
GABPB1-202ENST00000359031 ARMCX5Q6P1M9 558 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 REXO1Q8N1G1 1221 aaKnown RBP16.85■□□□□ 0.29
GABPB1-202ENST00000359031 DPF2Q92785 391 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 KLRG1Q96E93 195 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 TMEM60Q9H2L4 133 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 MAGEF1Q9HAY2 307 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 DYNC1I1O14576 645 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 MYL1P05976 194 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 OR52Z1P0C646 297 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 ADCY7P51828 1080 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 SEMA3FQ13275 785 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 SPATA1Q5VX52 437 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 KIAA0825Q8IV33 1275 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 TRMT44Q8IYL2 757 aaKnown RBP16.85■□□□□ 0.29
GABPB1-202ENST00000359031 CCDC112Q8NEF3 446 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 C7orf43Q8WVR3 580 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 UBA5Q9GZZ9 404 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 RNF181Q9P0P0 153 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 PIM2Q9P1W9 311 aa16.85■□□□□ 0.29
GABPB1-202ENST00000359031 FSTL1Q12841 308 aa16.84■□□□□ 0.29
GABPB1-202ENST00000359031 TPD52L1Q16890 204 aaPredicted RBP16.84■□□□□ 0.29
GABPB1-202ENST00000359031 GRIPAP1Q4V328 841 aa16.84■□□□□ 0.29
GABPB1-202ENST00000359031 CUEDC2Q9H467 287 aa16.84■□□□□ 0.29
GABPB1-202ENST00000359031 VAT1LQ9HCJ6 419 aa16.84■□□□□ 0.29
GABPB1-202ENST00000359031 PNMA6FA0A0J9YX94 578 aa16.83■□□□□ 0.28
GABPB1-202ENST00000359031 MPHOSPH10O00566 681 aaKnown RBP16.83■□□□□ 0.28
GABPB1-202ENST00000359031 CDK11BP21127 795 aaKnown RBP16.83■□□□□ 0.28
GABPB1-202ENST00000359031 CHRNA5P30532 468 aa16.83■□□□□ 0.28
GABPB1-202ENST00000359031 EIF6P56537 245 aaKnown RBP16.83■□□□□ 0.28
GABPB1-202ENST00000359031 CLEC10AQ8IUN9 316 aa16.83■□□□□ 0.28
GABPB1-202ENST00000359031 MED15Q96RN5 788 aa16.83■□□□□ 0.28
GABPB1-202ENST00000359031 KCNQ5Q9NR82 932 aa16.83■□□□□ 0.28
GABPB1-202ENST00000359031 INTS13Q9NVM9 706 aa16.83■□□□□ 0.28
GABPB1-202ENST00000359031 PI4KBQ9UBF8 816 aa16.83■□□□□ 0.28
GABPB1-202ENST00000359031 PPP1R3GB7ZBB8 358 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 CCNT1O60563 726 aaKnown RBP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 CD44P16070 742 aaKnown RBP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 CASP1P29466 404 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 GTF2F1P35269 517 aaKnown RBP eCLIP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 UBA7P41226 1012 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 KARSQ15046 597 aaKnown RBP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 CCDC96Q2M329 555 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 LETM2Q2VYF4 491 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 DALRD3Q5D0E6 543 aaKnown RBP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 COL13A1Q5TAT6 717 aaPredicted RBP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 RRAGBQ5VZM2 374 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 CCAR2Q8N163 923 aaKnown RBP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 C16orf45Q96MC5 204 aaPredicted RBP16.82■□□□□ 0.28
GABPB1-202ENST00000359031 MTRQ99707 1265 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 DNAJC18Q9H819 358 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 GPCPD1Q9NPB8 672 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 FAM198AQ9UFP1 575 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 ATRNL1Q5VV63 1379 aa16.82■□□□□ 0.28
GABPB1-202ENST00000359031 RPN1P04843 607 aaKnown RBP16.81■□□□□ 0.28
GABPB1-202ENST00000359031 TNNT1P13805 278 aa16.81■□□□□ 0.28
GABPB1-202ENST00000359031 RBM5P52756 815 aaKnown RBP eCLIP16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms