RNA–Protein interactions for RNA: ENST00000344204.8

TRIO-202, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIO, Length 11,100 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-202ENST00000344204 KRT80Q6KB66 452 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 HPCAL4Q9UM19 191 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 SLC4A4Q9Y6R1 1079 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 BUB1O43683 1085 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 SCRN1Q12765 414 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 TEKT1Q969V4 418 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 ELAC2Q9BQ52 826 aaKnown RBP14.88□□□□□ -0.03
TRIO-202ENST00000344204 ZMYND12Q9H0C1 365 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 RASGRF2O14827 1237 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 KCNA3P22001 575 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 CHPF2Q9P2E5 772 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 CITO14578 2027 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 H7C1D1 291 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 PER1O15534 1290 aaPredicted RBP14.88□□□□□ -0.03
TRIO-202ENST00000344204 TPP2P29144 1249 aaPredicted RBP14.88□□□□□ -0.03
TRIO-202ENST00000344204 MAIP1Q8WWC4 291 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 TTC38Q5R3I4 469 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 KIAA2013Q8IYS2 634 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 GRK7Q8WTQ7 553 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 TESK2Q96S53 571 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 ZKSCAN3Q9BRR0 538 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 S100BP04271 92 aaPredicted RBP14.88□□□□□ -0.03
TRIO-202ENST00000344204 NAPAP54920 295 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 CYLC2Q14093 348 aaPredicted RBP14.88□□□□□ -0.03
TRIO-202ENST00000344204 TSPYL6Q8N831 410 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 RETREG2Q8NC44 543 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 FHOD1Q9Y613 1164 aa14.88□□□□□ -0.03
TRIO-202ENST00000344204 DYTNA2CJ06 578 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 DKC1O60832 514 aaKnown RBP eCLIP14.87□□□□□ -0.033e-7■■■■■ 65.1
TRIO-202ENST00000344204 KRT79Q5XKE5 535 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 CRCPO75575 148 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 CXCR5P32302 372 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 TTLL11Q8NHH1 800 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 KCNA4P22459 653 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 PSMC1P62191 440 aaKnown RBP14.87□□□□□ -0.03
TRIO-202ENST00000344204 UTP6Q9NYH9 597 aaKnown RBP14.87□□□□□ -0.03
TRIO-202ENST00000344204 ZPR1O75312 459 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 NEK2P51955 445 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 CCDC144BQ3MJ40 725 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 OGFOD1Q8N543 542 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 NEK9Q8TD19 979 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 ITGB1BP2Q9UKP3 347 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 DEXIO95424 95 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 ARL1P40616 181 aaPredicted RBP14.87□□□□□ -0.03
TRIO-202ENST00000344204 OLFML2BQ68BL8 750 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 LRRIQ3A6PVS8 624 aaPredicted RBP14.87□□□□□ -0.03
TRIO-202ENST00000344204 ATF2P15336 505 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 TMEM154Q6P9G4 183 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 TRAF3IP3Q9Y228 551 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 FAM13AO94988 1023 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 NUDCD3Q8IVD9 361 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 ARHGEF9O43307 516 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 GSPT2Q8IYD1 628 aaKnown RBP14.87□□□□□ -0.03
TRIO-202ENST00000344204 CHMP6Q96FZ7 201 aa14.87□□□□□ -0.03
TRIO-202ENST00000344204 FTOQ9C0B1 505 aaKnown RBP eCLIP14.87□□□□□ -0.03
TRIO-202ENST00000344204 TRIM37O94972 964 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 LSP1P33241 339 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 ADCY8P40145 1251 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 USP14P54578 494 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 MAGOHP61326 146 aaKnown RBP14.86□□□□□ -0.03
TRIO-202ENST00000344204 AP2B1P63010 937 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 OTUD7BQ6GQQ9 843 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 TEKT4Q8WW24 435 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 MAGOHBQ96A72 148 aaKnown RBP14.86□□□□□ -0.03
TRIO-202ENST00000344204 ANLNQ9NQW6 1124 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 PACSIN2Q9UNF0 486 aaPredicted RBP14.86□□□□□ -0.03
TRIO-202ENST00000344204 DMRT2Q9Y5R5 561 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 GFAPP14136 432 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 KRT40Q6A162 431 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.86□□□□□ -0.03
TRIO-202ENST00000344204 FAM227BQ96M60 508 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 RIC8AQ9NPQ8 531 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 POLR3EQ9NVU0 708 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 MFAP3LO75121 409 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 TRIM42Q8IWZ5 723 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 PDP2Q9P2J9 529 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 A0A087WWV3 80 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 MCF2LO15068 1137 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 ZNF444Q8N0Y2 327 aaPredicted RBP14.86□□□□□ -0.03
TRIO-202ENST00000344204 TRAPPC8Q9Y2L5 1435 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 CARMIL3Q8ND23 1372 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 HARSP12081 509 aaKnown RBP14.86□□□□□ -0.03
TRIO-202ENST00000344204 RASSF7Q02833 373 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 LZICQ8WZA0 190 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 LIN9Q5TKA1 542 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 LRRC37BQ96QE4 947 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 MAN1A1P33908 653 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 HDLBPQ00341 1268 aaKnown RBP14.86□□□□□ -0.03
TRIO-202ENST00000344204 NSMCE1Q8WV22 266 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 TSPY2A6NKD2 308 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 GNA14O95837 355 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 ANKRD35Q8N283 1001 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 EFHD1Q9BUP0 239 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 ARHGAP4P98171 946 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 BBOF1Q8ND07 529 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 SDCCAG3Q96C92 435 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 SGSM3Q96HU1 749 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 PBKQ96KB5 322 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 UIMC1Q96RL1 719 aa14.86□□□□□ -0.03
TRIO-202ENST00000344204 AGTPBP1Q9UPW5 1226 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms