RNA–Protein interactions for RNA: ENST00000340811.8

PKP2-202, Transcript of plakophilin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP2-202ENST00000340811 DNAI1Q9UI46 699 aa13.86□□□□□ -0.19
PKP2-202ENST00000340811 NEBLO76041 1014 aa13.86□□□□□ -0.19
PKP2-202ENST00000340811 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
PKP2-202ENST00000340811 ADKP55263 362 aaKnown RBP13.86□□□□□ -0.19
PKP2-202ENST00000340811 CACNB1Q02641 598 aaPredicted RBP13.86□□□□□ -0.19
PKP2-202ENST00000340811 NKX2-3Q8TAU0 364 aa13.86□□□□□ -0.19
PKP2-202ENST00000340811 LZTFL1Q9NQ48 299 aa13.86□□□□□ -0.19
PKP2-202ENST00000340811 SWAP70Q9UH65 585 aa13.86□□□□□ -0.19
PKP2-202ENST00000340811 PYCARDQ9ULZ3 195 aa13.86□□□□□ -0.19
PKP2-202ENST00000340811 PCDHA4Q9UN74 947 aa13.86□□□□□ -0.19
PKP2-202ENST00000340811 USP17L15C9J2P7 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L13C9JLJ4 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L11C9JVI0 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L18D6R9N7 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L22D6RA61 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L17D6RBQ6 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L19D6RCP7 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L20D6RJB6 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L24Q0WX57 530 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 FAM47CQ5HY64 1035 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L6PQ6QN14 398 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 DPP9Q86TI2 863 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 NLRX1Q86UT6 975 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 FOXP4Q8IVH2 680 aaPredicted RBP13.85□□□□□ -0.19
PKP2-202ENST00000340811 KIF18AQ8NI77 898 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 RGPD1P0DJD0 1748 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 SPA17Q15506 151 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 SV2BQ7L1I2 683 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 DHX37Q8IY37 1157 aaKnown RBP13.85□□□□□ -0.19
PKP2-202ENST00000340811 FMR1NBQ8N0W7 255 aaPredicted RBP13.85□□□□□ -0.19
PKP2-202ENST00000340811 CCPG1Q9ULG6 757 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 POLRMTO00411 1230 aaKnown RBP13.85□□□□□ -0.19
PKP2-202ENST00000340811 NBPF11Q86T75 865 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 C2orf69Q8N8R5 385 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 MRPL11Q9Y3B7 192 aaKnown RBP13.85□□□□□ -0.19
PKP2-202ENST00000340811 MYO3BQ8WXR4 1341 aa13.85□□□□□ -0.19
PKP2-202ENST00000340811 USP17L10C9JJH3 530 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 GRIN3BO60391 1043 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 MYCP01106 439 aaPredicted RBP13.84□□□□□ -0.19
PKP2-202ENST00000340811 SRGNP10124 158 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 DPEP1P16444 411 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 KCTD2Q14681 263 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 PRAMEF18Q5VWM3 479 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 TTC16Q8NEE8 873 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 PPP6R2O75170 966 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 TICAM2Q86XR7 235 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 FAM114A1Q8IWE2 563 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 SPAG5Q96R06 1193 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 RNF216Q9NWF9 866 aaPredicted RBP13.84□□□□□ -0.19
PKP2-202ENST00000340811 CCDC169A6NNP5 214 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 RASA1P20936 1047 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 CCNA1P78396 465 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 TROAPQ12815 778 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 CEP135Q66GS9 1140 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 CDC42EP5Q6NZY7 148 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 KRT26Q7Z3Y9 468 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 SYNRGQ9UMZ2 1314 aa13.84□□□□□ -0.19
PKP2-202ENST00000340811 OR52Z1P0C646 297 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 KIF4BQ2VIQ3 1234 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 GNPTABQ3T906 1256 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 ARHGEF16Q5VV41 709 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 HAUS3Q68CZ6 603 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.83□□□□□ -0.19
PKP2-202ENST00000340811 MLXIPQ9HAP2 919 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 PCDHA12Q9UN75 941 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 PCDHAC2Q9Y5I4 1007 aa13.83□□□□□ -0.19
PKP2-202ENST00000340811 ARHGEF35A5YM69 484 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 FOXP2O15409 715 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 EEF2P13639 858 aaKnown RBP13.83□□□□□ -0.2
PKP2-202ENST00000340811 GPS2Q13227 327 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 MLKLQ8NB16 471 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 ASNSP08243 561 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 VEGFAP15692 232 aaPredicted RBP13.83□□□□□ -0.2
PKP2-202ENST00000340811 PFKFB3Q16875 520 aaPredicted RBP13.83□□□□□ -0.2
PKP2-202ENST00000340811 HERC4Q5GLZ8 1057 aaPredicted RBP13.83□□□□□ -0.2
PKP2-202ENST00000340811 GPATCH4Q5T3I0 446 aaKnown RBP13.83□□□□□ -0.2
PKP2-202ENST00000340811 CCDC125Q86Z20 511 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 CSGALNACT2Q8N6G5 542 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 IMPG2Q9BZV3 1241 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 SLC39A2Q9NP94 309 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 ZNRF3Q9ULT6 936 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 IQCA1LA6NCM1 817 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 TRAF5O00463 557 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 PRR29P0C7W0 189 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 IGSF22Q8N9C0 903 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 GJA10Q969M2 543 aa13.83□□□□□ -0.2
PKP2-202ENST00000340811 SAMSN1Q9NSI8 373 aaKnown RBP13.83□□□□□ -0.2
PKP2-202ENST00000340811 ORC4O43929 436 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 DKC1O60832 514 aaKnown RBP eCLIP13.82□□□□□ -0.2
PKP2-202ENST00000340811 ARHGEF6Q15052 776 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 NELFBQ8WX92 580 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 RUFY1Q96T51 708 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 PTPREP23469 700 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 CETN2P41208 172 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 USP14P54578 494 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 SYT10Q6XYQ8 523 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 WRNIP1Q96S55 665 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 GCOM1H8Y6P7 765 aaPredicted RBP13.82□□□□□ -0.2
PKP2-202ENST00000340811 POLR2MP0CAP2 368 aa13.82□□□□□ -0.2
PKP2-202ENST00000340811 AMNQ9BXJ7 453 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms