RNA–Protein interactions for RNA: ENST00000340699.7

PBX1-201, Transcript of PBX homeobox 1, humanhuman

TSL 4

Gene PBX1, Length 734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-201ENST00000340699 MAML3Q96JK9 1138 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 AGBL1Q96MI9 1066 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 CRISPLD2Q9H0B8 497 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 HOMER2Q9NSB8 354 aa26.36■■□□□ 1.81
PBX1-201ENST00000340699 CNGA1P29973 690 aa26.35■■□□□ 1.81
PBX1-201ENST00000340699 CCND3P30281 292 aaPredicted RBP26.35■■□□□ 1.81
PBX1-201ENST00000340699 SART3Q15020 963 aaKnown RBP26.35■■□□□ 1.81
PBX1-201ENST00000340699 ACAD9Q9H845 621 aa26.35■■□□□ 1.81
PBX1-201ENST00000340699 ZNF536O15090 1300 aa26.35■■□□□ 1.81
PBX1-201ENST00000340699 IFIT3O14879 490 aaKnown RBP26.34■■□□□ 1.81
PBX1-201ENST00000340699 ALAS1P13196 640 aa26.34■■□□□ 1.81
PBX1-201ENST00000340699 ZNF792Q3KQV3 632 aa26.34■■□□□ 1.81
PBX1-201ENST00000340699 DHX30Q7L2E3 1194 aaKnown RBP eCLIP26.34■■□□□ 1.81
PBX1-201ENST00000340699 TRERF1Q96PN7 1200 aa26.34■■□□□ 1.81
PBX1-201ENST00000340699 RANBP17Q9H2T7 1088 aaKnown RBP26.34■■□□□ 1.81
PBX1-201ENST00000340699 RNF146Q9NTX7 359 aa26.34■■□□□ 1.81
PBX1-201ENST00000340699 CCPG1Q9ULG6 757 aa26.34■■□□□ 1.81
PBX1-201ENST00000340699 FARP2O94887 1054 aaPredicted RBP26.33■■□□□ 1.81
PBX1-201ENST00000340699 ICAM1P05362 532 aa26.33■■□□□ 1.81
PBX1-201ENST00000340699 GOLGA8HP0CJ92 632 aa26.33■■□□□ 1.81
PBX1-201ENST00000340699 SEC23AQ15436 765 aa26.33■■□□□ 1.81
PBX1-201ENST00000340699 STOX1Q6ZVD7 989 aa26.33■■□□□ 1.81
PBX1-201ENST00000340699 PNMA2Q9UL42 364 aa26.33■■□□□ 1.81
PBX1-201ENST00000340699 TAF6LQ9Y6J9 622 aa26.33■■□□□ 1.81
PBX1-201ENST00000340699 SLC27A2O14975 620 aa26.32■■□□□ 1.8
PBX1-201ENST00000340699 IGHA2P01877 340 aa26.32■■□□□ 1.8
PBX1-201ENST00000340699 PARP1P09874 1014 aaKnown RBP26.32■■□□□ 1.8
PBX1-201ENST00000340699 ASPRV1Q53RT3 343 aa26.32■■□□□ 1.8
PBX1-201ENST00000340699 RNF20Q5VTR2 975 aa26.32■■□□□ 1.8
PBX1-201ENST00000340699 WTAPQ15007 396 aa26.31■■□□□ 1.8
PBX1-201ENST00000340699 NECTIN1Q15223 517 aa26.31■■□□□ 1.8
PBX1-201ENST00000340699 CREB3L3Q68CJ9 461 aa26.31■■□□□ 1.8
PBX1-201ENST00000340699 ANKLE1Q8NAG6 615 aa26.31■■□□□ 1.8
PBX1-201ENST00000340699 TINF2Q9BSI4 451 aa26.31■■□□□ 1.8
PBX1-201ENST00000340699 PLXNA1Q9UIW2 1896 aa26.31■■□□□ 1.8
PBX1-201ENST00000340699 MSCO60682 206 aa26.3■■□□□ 1.8
PBX1-201ENST00000340699 CYBAP13498 195 aa26.3■■□□□ 1.8
PBX1-201ENST00000340699 CHST3Q7LGC8 479 aa26.3■■□□□ 1.8
PBX1-201ENST00000340699 UBA5Q9GZZ9 404 aa26.3■■□□□ 1.8
PBX1-201ENST00000340699 OGDHLQ9ULD0 1010 aa26.3■■□□□ 1.8
PBX1-201ENST00000340699 DNAJC25-GNG10A0A024R161 153 aa26.29■■□□□ 1.8
PBX1-201ENST00000340699 TMEM67Q5HYA8 995 aa26.29■■□□□ 1.8
PBX1-201ENST00000340699 MB21D2Q8IYB1 491 aaPredicted RBP26.29■■□□□ 1.8
PBX1-201ENST00000340699 MSL3Q8N5Y2 521 aaKnown RBP26.29■■□□□ 1.8
PBX1-201ENST00000340699 DDX20Q9UHI6 824 aaKnown RBP26.29■■□□□ 1.8
PBX1-201ENST00000340699 LHX8Q68G74 356 aa26.28■■□□□ 1.8
PBX1-201ENST00000340699 TRPV1Q8NER1 839 aa26.28■■□□□ 1.8
PBX1-201ENST00000340699 HTATIP2Q9BUP3 242 aa26.28■■□□□ 1.8
PBX1-201ENST00000340699 NRBP1Q9UHY1 535 aa26.28■■□□□ 1.8
PBX1-201ENST00000340699 PFASO15067 1338 aa26.28■■□□□ 1.8
PBX1-201ENST00000340699 POTEB2H3BUK9 544 aa26.27■■□□□ 1.8
PBX1-201ENST00000340699 DHX16O60231 1041 aaKnown RBP26.27■■□□□ 1.8
PBX1-201ENST00000340699 MCM5P33992 734 aa26.27■■□□□ 1.8
PBX1-201ENST00000340699 PRAMEF19Q5SWL8 479 aa26.27■■□□□ 1.8
PBX1-201ENST00000340699 NECAB2Q7Z6G3 386 aa26.27■■□□□ 1.8
PBX1-201ENST00000340699 UBE2Q1Q7Z7E8 422 aa26.27■■□□□ 1.8
PBX1-201ENST00000340699 ZNF467Q7Z7K2 595 aaPredicted RBP26.27■■□□□ 1.8
PBX1-201ENST00000340699 A1CFQ9NQ94 594 aaKnown RBP26.27■■□□□ 1.8
PBX1-201ENST00000340699 CNPY2Q9Y2B0 182 aa26.27■■□□□ 1.8
PBX1-201ENST00000340699 MUM1L1Q5H9M0 696 aa26.26■■□□□ 1.79
PBX1-201ENST00000340699 PAWRQ96IZ0 340 aaKnown RBP26.26■■□□□ 1.79
PBX1-201ENST00000340699 MTA3Q9BTC8 594 aa26.26■■□□□ 1.79
PBX1-201ENST00000340699 CPVLQ9H3G5 476 aa26.26■■□□□ 1.79
PBX1-201ENST00000340699 TNRC18O15417 2968 aaPredicted RBP26.25■■□□□ 1.79
PBX1-201ENST00000340699 BRCA2P51587 3418 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 WDR19Q8NEZ3 1342 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 SYNGAP1Q96PV0 1343 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 SEPT4O43236 478 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 PRC1O43663 620 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 ANTXR2P58335 489 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 MAMDC4Q6UXC1 1216 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 NSMFQ6X4W1 530 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 CATIPQ7Z7H3 387 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 ADGRF4Q8IZF3 695 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 IGDCC4Q8TDY8 1250 aa26.25■■□□□ 1.79
PBX1-201ENST00000340699 CDC37Q16543 378 aaPredicted RBP26.24■■□□□ 1.79
PBX1-201ENST00000340699 DPF3Q92784 378 aa26.24■■□□□ 1.79
PBX1-201ENST00000340699 VAT1LQ9HCJ6 419 aa26.24■■□□□ 1.79
PBX1-201ENST00000340699 KLRF2D3W0D1 207 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 TAL1P17542 331 aaPredicted RBP26.23■■□□□ 1.79
PBX1-201ENST00000340699 CNTN2Q02246 1040 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 TMTC2Q8N394 836 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 STAG2Q8N3U4 1231 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 FAM133AQ8N9E0 248 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 DIS3LQ8TF46 1054 aaKnown RBP26.23■■□□□ 1.79
PBX1-201ENST00000340699 TMEM87BQ96K49 555 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 SENP2Q9HC62 589 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 CYP39A1Q9NYL5 469 aa26.23■■□□□ 1.79
PBX1-201ENST00000340699 GRM4Q14833 912 aa26.22■■□□□ 1.79
PBX1-201ENST00000340699 C11orf49Q9H6J7 331 aa26.22■■□□□ 1.79
PBX1-201ENST00000340699 MAD2L2Q9UI95 211 aa26.22■■□□□ 1.79
PBX1-201ENST00000340699 PTPDC1A2A3K4 754 aa26.21■■□□□ 1.79
PBX1-201ENST00000340699 PALM3A6NDB9 673 aaPredicted RBP26.21■■□□□ 1.79
PBX1-201ENST00000340699 SNAI1O95863 264 aaPredicted RBP26.21■■□□□ 1.79
PBX1-201ENST00000340699 USH1GQ495M9 461 aa26.21■■□□□ 1.79
PBX1-201ENST00000340699 NFXL1Q6ZNB6 911 aa26.21■■□□□ 1.79
PBX1-201ENST00000340699 NEK1Q96PY6 1258 aa26.21■■□□□ 1.79
PBX1-201ENST00000340699 JMJD4Q9H9V9 463 aa26.21■■□□□ 1.79
PBX1-201ENST00000340699 CCDC69A6NI79 296 aa26.2■■□□□ 1.78
PBX1-201ENST00000340699 ASB14A6NK59 587 aa26.2■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms