RNA–Protein interactions for RNA: ENST00000340611.8

BRAT1-201, Transcript of BRCA1 associated ATM activator 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BRAT1, Length 2,915 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-201ENST00000340611 DGKHQ86XP1 1220 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 CCAR1Q8IX12 1150 aaKnown RBP17.11■□□□□ 0.33
BRAT1-201ENST00000340611 EPC1Q9H2F5 836 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 GOLPH3LQ9H4A5 285 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 VAT1LQ9HCJ6 419 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 MTMR4Q9NYA4 1195 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 SBF1O95248 1867 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 LTBP3Q9NS15 1303 aa17.11■□□□□ 0.33
BRAT1-201ENST00000340611 ADAMTS3O15072 1205 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 EPS15P42566 896 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 CERKLQ49MI3 558 aaPredicted RBP17.1■□□□□ 0.33
BRAT1-201ENST00000340611 FOXR1Q6PIV2 292 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 TRPM4Q8TD43 1214 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 UBA5Q9GZZ9 404 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 CDKL5O76039 1030 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 NOM1Q5C9Z4 860 aaKnown RBP17.1■□□□□ 0.33
BRAT1-201ENST00000340611 TMTC3Q6ZXV5 915 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 MRFAP1L1Q96HT8 127 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 MTA3Q9BTC8 594 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 MAD2L2Q9UI95 211 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 LMNB1P20700 586 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 PKN1Q16512 942 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 STX1AQ16623 288 aa17.1■□□□□ 0.33
BRAT1-201ENST00000340611 CCAR2Q8N163 923 aaKnown RBP17.1■□□□□ 0.33
BRAT1-201ENST00000340611 DHX36Q9H2U1 1008 aaKnown RBP17.1■□□□□ 0.33
BRAT1-201ENST00000340611 SARM1Q6SZW1 724 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 EGFL6Q8IUX8 553 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 AOPEPQ8N6M6 819 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
BRAT1-201ENST00000340611 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.09■□□□□ 0.33
BRAT1-201ENST00000340611 CYTH3O43739 400 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 DDAH1O94760 285 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 GH2P01242 217 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 RASA3Q14644 834 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 TRIM22Q8IYM9 498 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 OXER1Q8TDS5 423 aa17.09■□□□□ 0.33
BRAT1-201ENST00000340611 CNTNAP5Q8WYK1 1306 aa17.08■□□□□ 0.33
BRAT1-201ENST00000340611 ENTPD3O75355 529 aa17.08■□□□□ 0.33
BRAT1-201ENST00000340611 HOMER1Q86YM7 354 aa17.08■□□□□ 0.33
BRAT1-201ENST00000340611 DHX40Q8IX18 779 aaKnown RBP17.08■□□□□ 0.33
BRAT1-201ENST00000340611 ZBED3Q96IU2 234 aaPredicted RBP17.08■□□□□ 0.33
BRAT1-201ENST00000340611 GPCPD1Q9NPB8 672 aa17.08■□□□□ 0.33
BRAT1-201ENST00000340611 TCP11L1Q9NUJ3 509 aa17.08■□□□□ 0.33
BRAT1-201ENST00000340611 POLR2AP24928 1970 aaKnown RBP17.08■□□□□ 0.32
BRAT1-201ENST00000340611 MYH4Q9Y623 1939 aa17.08■□□□□ 0.32
BRAT1-201ENST00000340611 CCDC196A0A1B0GTZ2 297 aa17.08■□□□□ 0.32
BRAT1-201ENST00000340611 MYO1BO43795 1136 aa17.08■□□□□ 0.32
BRAT1-201ENST00000340611 NR5A1Q13285 461 aa17.08■□□□□ 0.32
BRAT1-201ENST00000340611 HACL1Q9UJ83 578 aa17.08■□□□□ 0.32
BRAT1-201ENST00000340611 BTBD18B2RXH4 712 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 KIF4BQ2VIQ3 1234 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 FAM151AQ8WW52 585 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 USP28Q96RU2 1077 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 SWAP70Q9UH65 585 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 FAM205CA6NFA0 338 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 NEMFO60524 1076 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 EEF2P13639 858 aaKnown RBP17.07■□□□□ 0.32
BRAT1-201ENST00000340611 SLC16A2P36021 539 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 TTBK2Q6IQ55 1244 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 FAM43BQ6ZT52 329 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-201ENST00000340611 KCTD1Q719H9 257 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 CFAP45Q9UL16 551 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 AKAP17AQ02040 695 aaKnown RBP17.07■□□□□ 0.32
BRAT1-201ENST00000340611 KIF23Q02241 960 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-201ENST00000340611 C9orf131Q5VYM1 1079 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 CCDC73Q6ZRK6 1079 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 SIAH1Q8IUQ4 282 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 GOLGA5Q8TBA6 731 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 NUP88Q99567 741 aaPredicted RBP17.07■□□□□ 0.32
BRAT1-201ENST00000340611 EHD4Q9H223 541 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 PLEKHA4Q9H4M7 779 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 NID2Q14112 1375 aa17.07■□□□□ 0.32
BRAT1-201ENST00000340611 IGKV6D-41A0A0C4DH26 115 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 KLRF2D3W0D1 207 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 KINO60870 393 aaKnown RBP17.06■□□□□ 0.32
BRAT1-201ENST00000340611 TOP1P11387 765 aaKnown RBP17.06■□□□□ 0.32
BRAT1-201ENST00000340611 ZNF280AP59817 542 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-201ENST00000340611 CCDC91Q7Z6B0 441 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 DONSONQ9NYP3 566 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 DEXIO95424 95 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 CAVIN2O95810 425 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 CALM1P0DP23 149 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 CALM2P0DP24 149 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 CALM3P0DP25 149 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 HIRAP54198 1017 aaPredicted RBP17.06■□□□□ 0.32
BRAT1-201ENST00000340611 SMC1AQ14683 1233 aaKnown RBP17.06■□□□□ 0.32
BRAT1-201ENST00000340611 GRM4Q14833 912 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 ZYXQ15942 572 aaKnown RBP17.06■□□□□ 0.32
BRAT1-201ENST00000340611 GPR162Q16538 588 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 ABCB5Q2M3G0 1257 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 ANGEL2Q5VTE6 544 aaKnown RBP17.06■□□□□ 0.32
BRAT1-201ENST00000340611 REXO1L1PQ8IX06 675 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 SPICE1Q8N0Z3 855 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 ANKS1AQ92625 1134 aa17.06■□□□□ 0.32
BRAT1-201ENST00000340611 ECE1P42892 770 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 GNL2Q13823 731 aaKnown RBP17.05■□□□□ 0.32
BRAT1-201ENST00000340611 TATDN1Q6P1N9 297 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 FOXP4Q8IVH2 680 aaPredicted RBP17.05■□□□□ 0.32
BRAT1-201ENST00000340611 ATRNL1Q5VV63 1379 aa17.05■□□□□ 0.32
BRAT1-201ENST00000340611 EIF3CLB5ME19 914 aaKnown RBP17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms