RNA–Protein interactions for RNA: ENST00000338353.3

FAM78B-201, Transcript of family with sequence similarity 78 member B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FAM78B, Length 1,597 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM78B-201ENST00000338353 TCEANC2Q96MN5 208 aa28.89■■■□□ 2.22
FAM78B-201ENST00000338353 APBA2Q99767 749 aa28.89■■■□□ 2.22
FAM78B-201ENST00000338353 HOMER2Q9NSB8 354 aa28.89■■■□□ 2.22
FAM78B-201ENST00000338353 NFXL1Q6ZNB6 911 aa28.88■■■□□ 2.21
FAM78B-201ENST00000338353 CATIPQ7Z7H3 387 aa28.88■■■□□ 2.21
FAM78B-201ENST00000338353 STAG2Q8N3U4 1231 aa28.88■■■□□ 2.21
FAM78B-201ENST00000338353 MMP19Q99542 508 aa28.88■■■□□ 2.21
FAM78B-201ENST00000338353 RANBP17Q9H2T7 1088 aaKnown RBP28.88■■■□□ 2.21
FAM78B-201ENST00000338353 XRCC5P13010 732 aaKnown RBP28.88■■■□□ 2.21
FAM78B-201ENST00000338353 DHX32Q7L7V1 743 aaKnown RBP28.88■■■□□ 2.21
FAM78B-201ENST00000338353 DPP9Q86TI2 863 aa28.88■■■□□ 2.21
FAM78B-201ENST00000338353 JAKMIP1Q96N16 626 aaKnown RBP28.88■■■□□ 2.21
FAM78B-201ENST00000338353 CCL14Q16627 93 aa28.87■■■□□ 2.21
FAM78B-201ENST00000338353 IFFO2Q5TF58 517 aa28.87■■■□□ 2.21
FAM78B-201ENST00000338353 ABRAQ8N0Z2 381 aa28.87■■■□□ 2.21
FAM78B-201ENST00000338353 TRIB2Q92519 343 aa28.87■■■□□ 2.21
FAM78B-201ENST00000338353 ZNF236Q9UL36 1845 aa28.87■■■□□ 2.21
FAM78B-201ENST00000338353 SMCHD1A6NHR9 2005 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 INHAP05111 366 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 CPA1P15085 419 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 TAL1P17542 331 aaPredicted RBP28.86■■■□□ 2.21
FAM78B-201ENST00000338353 EXOSC10Q01780 885 aaKnown RBP28.86■■■□□ 2.21
FAM78B-201ENST00000338353 TROAPQ12815 778 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 KCTD2Q14681 263 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 GRM4Q14833 912 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 RABEP1Q15276 862 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 ZNF654Q8IZM8 581 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 TMTC2Q8N394 836 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 NPLOC4Q8TAT6 608 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 NUP133Q8WUM0 1156 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 MYL10Q9BUA6 226 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 MAD2L2Q9UI95 211 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 CCPG1Q9ULG6 757 aa28.86■■■□□ 2.21
FAM78B-201ENST00000338353 CCDC69A6NI79 296 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 COBLO75128 1261 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 ALAS1P13196 640 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 LIFRP42702 1097 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 SOX10P56693 466 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 UBXN2AP68543 259 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 MTFR1Q15390 333 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 WDR19Q8NEZ3 1342 aa28.85■■■□□ 2.21
FAM78B-201ENST00000338353 KIAA0100Q14667 2235 aaKnown RBP28.84■■■□□ 2.21
FAM78B-201ENST00000338353 KLRF2D3W0D1 207 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 DHX16O60231 1041 aaKnown RBP28.84■■■□□ 2.21
FAM78B-201ENST00000338353 HMGCRP04035 888 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 ICAM1P05362 532 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 HMGB1P09429 215 aaKnown RBP28.84■■■□□ 2.21
FAM78B-201ENST00000338353 ADGRF4Q8IZF3 695 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 CHST13Q8NET6 341 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 VAT1LQ9HCJ6 419 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 RNF146Q9NTX7 359 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 PALM3A6NDB9 673 aaPredicted RBP28.84■■■□□ 2.21
FAM78B-201ENST00000338353 PGK2P07205 417 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 HOXC6P09630 235 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 TRIM32Q13049 653 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 FBXO40Q9UH90 709 aa28.84■■■□□ 2.21
FAM78B-201ENST00000338353 ANP32AP39687 249 aaKnown RBP28.83■■■□□ 2.21
FAM78B-201ENST00000338353 BLOC1S2Q6QNY1 142 aa28.83■■■□□ 2.21
FAM78B-201ENST00000338353 TRMT44Q8IYL2 757 aaKnown RBP28.83■■■□□ 2.21
FAM78B-201ENST00000338353 TRERF1Q96PN7 1200 aa28.83■■■□□ 2.21
FAM78B-201ENST00000338353 TM6SF1Q9BZW5 370 aa28.83■■■□□ 2.21
FAM78B-201ENST00000338353 FLRT1Q9NZU1 646 aa28.83■■■□□ 2.21
FAM78B-201ENST00000338353 DDAH1O94760 285 aa28.82■■■□□ 2.2
FAM78B-201ENST00000338353 TKFCQ3LXA3 575 aa28.82■■■□□ 2.2
FAM78B-201ENST00000338353 ACAD9Q9H845 621 aa28.82■■■□□ 2.2
FAM78B-201ENST00000338353 SLC5A4Q9NY91 659 aa28.82■■■□□ 2.2
FAM78B-201ENST00000338353 BAZ2BQ9UIF8 2168 aaKnown RBP28.81■■■□□ 2.2
FAM78B-201ENST00000338353 CASTP20810 708 aaKnown RBP28.81■■■□□ 2.2
FAM78B-201ENST00000338353 PSMA5P28066 241 aa28.81■■■□□ 2.2
FAM78B-201ENST00000338353 CDC37Q16543 378 aaPredicted RBP28.81■■■□□ 2.2
FAM78B-201ENST00000338353 RAB11FIP4Q86YS3 637 aa28.81■■■□□ 2.2
FAM78B-201ENST00000338353 ANKRD35Q8N283 1001 aa28.81■■■□□ 2.2
FAM78B-201ENST00000338353 DDX11Q96FC9 970 aa28.81■■■□□ 2.2
FAM78B-201ENST00000338353 SLC12A7Q9Y666 1083 aa28.81■■■□□ 2.2
FAM78B-201ENST00000338353 MYH6P13533 1939 aa28.81■■■□□ 2.2
FAM78B-201ENST00000338353 CCL5P13501 91 aa28.8■■■□□ 2.2
FAM78B-201ENST00000338353 RXRAP19793 462 aa28.8■■■□□ 2.2
FAM78B-201ENST00000338353 MUM1L1Q5H9M0 696 aa28.8■■■□□ 2.2
FAM78B-201ENST00000338353 TMEM106CQ9BVX2 250 aa28.8■■■□□ 2.2
FAM78B-201ENST00000338353 UNC93B1Q9H1C4 597 aa28.8■■■□□ 2.2
FAM78B-201ENST00000338353 JMJD4Q9H9V9 463 aa28.8■■■□□ 2.2
FAM78B-201ENST00000338353 PLXNA1Q9UIW2 1896 aa28.8■■■□□ 2.2
FAM78B-201ENST00000338353 FGD1P98174 961 aa28.79■■■□□ 2.2
FAM78B-201ENST00000338353 SGMS1Q86VZ5 419 aa28.79■■■□□ 2.2
FAM78B-201ENST00000338353 IL27Q8NEV9 243 aa28.79■■■□□ 2.2
FAM78B-201ENST00000338353 CTCFLQ8NI51 663 aaPredicted RBP28.79■■■□□ 2.2
FAM78B-201ENST00000338353 RNF208Q9H0X6 261 aa28.79■■■□□ 2.2
FAM78B-201ENST00000338353 DHX30Q7L2E3 1194 aaKnown RBP eCLIP28.79■■■□□ 2.2
FAM78B-201ENST00000338353 CCDC144CPQ8IYA2 1237 aa28.79■■■□□ 2.2
FAM78B-201ENST00000338353 POTEFA5A3E0 1075 aa28.78■■■□□ 2.2
FAM78B-201ENST00000338353 PRKAR2AP13861 404 aaKnown RBP28.78■■■□□ 2.2
FAM78B-201ENST00000338353 RPS6KB1P23443 525 aa28.78■■■□□ 2.2
FAM78B-201ENST00000338353 SLC35G1Q2M3R5 365 aa28.78■■■□□ 2.2
FAM78B-201ENST00000338353 QRICH1Q2TAL8 776 aa28.78■■■□□ 2.2
FAM78B-201ENST00000338353 USH1GQ495M9 461 aa28.78■■■□□ 2.2
FAM78B-201ENST00000338353 MAP3K14Q99558 947 aa28.78■■■□□ 2.2
FAM78B-201ENST00000338353 ZSWIM6Q9HCJ5 1215 aa28.78■■■□□ 2.2
FAM78B-201ENST00000338353 KIF5BP33176 963 aa28.77■■■□□ 2.2
FAM78B-201ENST00000338353 ZNF792Q3KQV3 632 aa28.77■■■□□ 2.2
FAM78B-201ENST00000338353 MFSD14CQ5VZR4 134 aa28.77■■■□□ 2.2
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms