RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 MEGF6O75095 1541 aa16.97■□□□□ 0.31
VARS2-201ENST00000321897 SPDYE3A6NKU9 549 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 PDE6BP35913 854 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 LIFRP42702 1097 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 SLC1A4P43007 532 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 E2F5Q15329 346 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 LLGL1Q15334 1064 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 TBC1D9BQ66K14 1250 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 AEBP2Q6ZN18 517 aaPredicted RBP16.96■□□□□ 0.31
VARS2-201ENST00000321897 PNMA8AQ86V59 439 aaPredicted RBP16.96■□□□□ 0.31
VARS2-201ENST00000321897 FAM71BQ8TC56 605 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 CTNNBL1Q8WYA6 563 aaPredicted RBP16.96■□□□□ 0.31
VARS2-201ENST00000321897 USP21Q9UK80 565 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 BUB1O43683 1085 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 N4BP1O75113 896 aaKnown RBP16.96■□□□□ 0.31
VARS2-201ENST00000321897 RPN1P04843 607 aaKnown RBP16.96■□□□□ 0.31
VARS2-201ENST00000321897 CXCR5P32302 372 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 PLCD1P51178 756 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 UBXN2AP68543 259 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 CALCRLQ16602 461 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 HPS3Q969F9 1004 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 KANSL2Q9H9L4 492 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 FHOD1Q9Y613 1164 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 NEBLO76041 1014 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 FGFR1OPO95684 399 aaKnown RBP16.96■□□□□ 0.31
VARS2-201ENST00000321897 SPATA1Q5VX52 437 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 KCTD1Q719H9 257 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 RIN2Q8WYP3 895 aaPredicted RBP16.96■□□□□ 0.31
VARS2-201ENST00000321897 JAKMIP2Q96AA8 810 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 TRIM31Q9BZY9 425 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 SAR1BQ9Y6B6 198 aa16.96■□□□□ 0.31
VARS2-201ENST00000321897 NEFHP12036 1026 aa16.96■□□□□ 0.3
VARS2-201ENST00000321897 KRT83P78385 493 aa16.96■□□□□ 0.3
VARS2-201ENST00000321897 FMR1Q06787 632 aaKnown RBP eCLIP16.96■□□□□ 0.3
VARS2-201ENST00000321897 UBE4AQ14139 1066 aa16.96■□□□□ 0.3
VARS2-201ENST00000321897 NYAP1Q6ZVC0 841 aa16.96■□□□□ 0.3
VARS2-201ENST00000321897 STAG2Q8N3U4 1231 aa16.96■□□□□ 0.3
VARS2-201ENST00000321897 RNF26Q9BY78 433 aaPredicted RBP16.96■□□□□ 0.3
VARS2-201ENST00000321897 FOXP1Q9H334 677 aaPredicted RBP16.96■□□□□ 0.3
VARS2-201ENST00000321897 DIP2BQ9P265 1576 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 PEX19P40855 299 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 VSTM4Q8IW00 320 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 CPXCR1Q8N123 301 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 NAA15Q9BXJ9 866 aaKnown RBP16.95■□□□□ 0.3
VARS2-201ENST00000321897 CAPS2Q9BXY5 557 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 HOMER2Q9NSB8 354 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 NCAPD2Q15021 1401 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 CYP26C1Q6V0L0 522 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 PIGSQ96S52 555 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 USP40Q9NVE5 1235 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 E7EVH7 732 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 PPP1R12BO60237 982 aaPredicted RBP16.95■□□□□ 0.3
VARS2-201ENST00000321897 RPSAP08865 295 aaKnown RBP16.95■□□□□ 0.3
VARS2-201ENST00000321897 C8orf74Q6P047 294 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 IGDCC4Q8TDY8 1250 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 PAGE5Q96GU1 130 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 SELENOSQ9BQE4 189 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 PYM1Q9BRP8 204 aaKnown RBP16.95■□□□□ 0.3
VARS2-201ENST00000321897 BAIAP2L1Q9UHR4 511 aa16.95■□□□□ 0.3
VARS2-201ENST00000321897 SH3RF3Q8TEJ3 882 aaPredicted RBP16.94■□□□□ 0.3
VARS2-201ENST00000321897 OSBPL5Q9H0X9 879 aaPredicted RBP16.94■□□□□ 0.3
VARS2-201ENST00000321897 CFBP00751 764 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 PTPREP23469 700 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 MAGEA9P43362 315 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 TMTC1Q8IUR5 882 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 LCMT1Q9UIC8 334 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 PALLDQ8WX93 1383 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 SORBS3O60504 671 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 SRGAP2O75044 1071 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 UBE2SQ16763 222 aa16.94■□□□□ 0.3
VARS2-201ENST00000321897 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP16.93■□□□□ 0.3
VARS2-201ENST00000321897 GJC1P36383 396 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 ARPP21Q9UBL0 812 aaPredicted RBP16.93■□□□□ 0.3
VARS2-201ENST00000321897 CPDO75976 1380 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 KDM6AO15550 1401 aaPredicted RBP16.93■□□□□ 0.3
VARS2-201ENST00000321897 ATP8B1O43520 1251 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 TUBBP07437 444 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 COPB1P53618 953 aaKnown RBP16.93■□□□□ 0.3
VARS2-201ENST00000321897 RESP18Q5W5W9 173 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 UTYO14607 1347 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 POTEDQ86YR6 584 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 KLHL7Q8IXQ5 586 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 DBNDD1Q9H9R9 158 aa16.93■□□□□ 0.3
VARS2-201ENST00000321897 MAGEA1P43355 309 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 CABS1Q96KC9 395 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 TACO1Q9BSH4 297 aaKnown RBP16.92■□□□□ 0.3
VARS2-201ENST00000321897 PCDHB13Q9Y5F0 798 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 SRPRBQ9Y5M8 271 aaKnown RBP16.92■□□□□ 0.3
VARS2-201ENST00000321897 OR8K1Q8NGG5 319 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 TBCKQ8TEA7 893 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 UBLCP1Q8WVY7 318 aaPredicted RBP16.92■□□□□ 0.3
VARS2-201ENST00000321897 FAM84BQ96KN1 310 aaPredicted RBP16.92■□□□□ 0.3
VARS2-201ENST00000321897 ZNF446Q9NWS9 450 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 TFR2Q9UP52 801 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 COL15A1P39059 1388 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 BICDL2A1A5D9 508 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 B4GALNT4Q76KP1 1039 aa16.92■□□□□ 0.3
VARS2-201ENST00000321897 ADAT2Q7Z6V5 191 aaKnown RBP16.92■□□□□ 0.3
VARS2-201ENST00000321897 SMCR8Q8TEV9 937 aaPredicted RBP16.92■□□□□ 0.3
VARS2-201ENST00000321897 IKBKBO14920 756 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms