RNA–Protein interactions for RNA: ENST00000307979.7

SNAPC5-201, Transcript of small nuclear RNA activating complex polypeptide 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SNAPC5, Length 794 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC5-201ENST00000307979 CHST3Q7LGC8 479 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 MB21D2Q8IYB1 491 aaPredicted RBP13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 ANKRD35Q8N283 1001 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 AGBL1Q96MI9 1066 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 DEFB118Q96PH6 123 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 MTA3Q9BTC8 594 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 RANBP17Q9H2T7 1088 aaKnown RBP13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 ACAD9Q9H845 621 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 PAK6Q9NQU5 681 aaPredicted RBP13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 HOMER2Q9NSB8 354 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 RNF146Q9NTX7 359 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 FLRT1Q9NZU1 646 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 CCPG1Q9ULG6 757 aa13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 DIS3Q9Y2L1 958 aaKnown RBP13.69□□□□□ -0.22
SNAPC5-201ENST00000307979 ZNF536O15090 1300 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 PRC1O43663 620 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 REC8O95072 547 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 ICAM1P05362 532 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 PGK2P07205 417 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 ALAS1P13196 640 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 CYP2C19P33261 490 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 MAML3Q96JK9 1138 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 TRERF1Q96PN7 1200 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 UBA5Q9GZZ9 404 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 PLXNB2O15031 1838 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 ZNF236Q9UL36 1845 aa13.68□□□□□ -0.22
SNAPC5-201ENST00000307979 KIAA0100Q14667 2235 aaKnown RBP13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 DHX16O60231 1041 aaKnown RBP13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 TFRCP02786 760 aaKnown RBP13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 ANTXR2P58335 489 aa13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 KRT32Q14532 448 aa13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 ZNF792Q3KQV3 632 aa13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 CATIPQ7Z7H3 387 aa13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 TMTC2Q8N394 836 aa13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 TMEM87BQ96K49 555 aa13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 COL11A1P12107 1806 aaPredicted RBP13.67□□□□□ -0.22
SNAPC5-201ENST00000307979 WDR19Q8NEZ3 1342 aa13.66□□□□□ -0.22
SNAPC5-201ENST00000307979 CNGA1P29973 690 aa13.66□□□□□ -0.22
SNAPC5-201ENST00000307979 CCND3P30281 292 aaPredicted RBP13.66□□□□□ -0.22
SNAPC5-201ENST00000307979 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
SNAPC5-201ENST00000307979 IGDCC4Q8TDY8 1250 aa13.66□□□□□ -0.22
SNAPC5-201ENST00000307979 SHISA4Q96DD7 197 aa13.66□□□□□ -0.22
SNAPC5-201ENST00000307979 NEK1Q96PY6 1258 aa13.66□□□□□ -0.22
SNAPC5-201ENST00000307979 PFASO15067 1338 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 DNAJC25-GNG10A0A024R161 153 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 CCDC69A6NI79 296 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 KLRF2D3W0D1 207 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 POTEB2H3BUK9 544 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 EPB41L2O43491 1005 aaKnown RBP13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 MSCO60682 206 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 IGHA2P01877 340 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 TSGA10IPQ3SY00 556 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 ADGRF4Q8IZF3 695 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 MSL3Q8N5Y2 521 aaKnown RBP13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 TINF2Q9BSI4 451 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 CRISPLD2Q9H0B8 497 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 CPVLQ9H3G5 476 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 SENP2Q9HC62 589 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 A1CFQ9NQ94 594 aaKnown RBP13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 NRBP1Q9UHY1 535 aa13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 RBBP6Q7Z6E9 1792 aaKnown RBP13.65□□□□□ -0.22
SNAPC5-201ENST00000307979 PALM3A6NDB9 673 aaPredicted RBP13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 SH2B2O14492 632 aaPredicted RBP13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 DDAH1O94760 285 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 FARP2O94887 1054 aaPredicted RBP13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 HMGB1P09429 215 aaKnown RBP13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 CYBAP13498 195 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 TROAPQ12815 778 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 GRM4Q14833 912 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 CDC37Q16543 378 aaPredicted RBP13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 MUM1L1Q5H9M0 696 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 NSMFQ6X4W1 530 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 ZNF467Q7Z7K2 595 aaPredicted RBP13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 ZNF654Q8IZM8 581 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 STAG2Q8N3U4 1231 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 ANKLE1Q8NAG6 615 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 CTCFLQ8NI51 663 aaPredicted RBP13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 NUP133Q8WUM0 1156 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 LY9Q9HBG7 655 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 VAT1LQ9HCJ6 419 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 MAD2L2Q9UI95 211 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 CNPY2Q9Y2B0 182 aa13.64□□□□□ -0.23
SNAPC5-201ENST00000307979 KIF5BP33176 963 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 HSPA4P34932 840 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 LIFRP42702 1097 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 MAMDC4Q6UXC1 1216 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 DHX32Q7L7V1 743 aaKnown RBP13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 RASEFQ8IZ41 740 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 MAP3K14Q99558 947 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 JMJD4Q9H9V9 463 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 DDX20Q9UHI6 824 aaKnown RBP13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 OGDHLQ9ULD0 1010 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 SYNGAP1Q96PV0 1343 aa13.63□□□□□ -0.23
SNAPC5-201ENST00000307979 SEPT4O43236 478 aa13.62□□□□□ -0.23
SNAPC5-201ENST00000307979 CALM1P0DP23 149 aa13.62□□□□□ -0.23
SNAPC5-201ENST00000307979 CALM2P0DP24 149 aa13.62□□□□□ -0.23
SNAPC5-201ENST00000307979 CALM3P0DP25 149 aa13.62□□□□□ -0.23
SNAPC5-201ENST00000307979 TAL1P17542 331 aaPredicted RBP13.62□□□□□ -0.23
SNAPC5-201ENST00000307979 TRAF1Q13077 416 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms