RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 PHF20Q9BVI0 1012 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 ZHX3Q9H4I2 956 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 ADAMTS5Q9UNA0 930 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 ATP2A1O14983 1001 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 ZSCAN22P10073 491 aaPredicted RBP9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 RAB11FIP4Q86YS3 637 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 C8orf76Q96K31 380 aa9.69□□□□□ -0.86
PTPDC1-201ENST00000288976 CALML3P27482 149 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 CST9Q5W186 159 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 ATL3Q6DD88 541 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 CATSPERGQ6ZRH7 1159 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 MB21D1Q8N884 522 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 FBXO18Q8NFZ0 1043 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 PHKBQ93100 1093 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 AGTPBP1Q9UPW5 1226 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 MTMR6Q9Y217 621 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 ATP6V1DQ9Y5K8 247 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 TMEM232C9JQI7 657 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 CETPP11597 493 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 SPP2Q13103 211 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 MOGSQ13724 837 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 TKFCQ3LXA3 575 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 KCTD1Q719H9 257 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 SLC10A4Q96EP9 437 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 GPCPD1Q9NPB8 672 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 ZNF236Q9UL36 1845 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 COL11A1P12107 1806 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 STXBP3O00186 592 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 MMP1P03956 469 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 GHRHRQ02643 423 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 BRAPQ7Z569 592 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 ANKRD23Q86SG2 305 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 PRPF38AQ8NAV1 312 aaKnown RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 ZNF526Q8TF50 670 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 FOXP1Q9H334 677 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 RPAP3Q9H6T3 665 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 BRMS1Q9HCU9 246 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 FRMD4AQ9P2Q2 1039 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 PPP1R9AQ9ULJ8 1098 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 V9GY48 417 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 ABCB11O95342 1321 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 SPDYE4A6NLX3 237 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 CDC37Q16543 378 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 REM2Q8IYK8 340 aaPredicted RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 BICD2Q8TD16 824 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 MAP3K20Q9NYL2 800 aaKnown RBP9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 PRR12Q9ULL5 1215 aa9.68□□□□□ -0.86
PTPDC1-201ENST00000288976 GOLGA8HP0CJ92 632 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 WWC2Q6AWC2 1192 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 RASAL3Q86YV0 1011 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 MORC2Q9Y6X9 1032 aaPredicted RBP9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 TRIM75PA6NK02 468 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 UBE2Q2LH0YL09 131 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 F13A1P00488 732 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 DSG3P32926 999 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 COPB2P35606 906 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 SPRYD7Q5W111 196 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 DLK2Q6UY11 383 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 PIGSQ96S52 555 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 ZMYND12Q9H0C1 365 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 FZD1Q9UP38 647 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 U2AF2P26368 475 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 HMGCS2P54868 508 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 PRKG1Q13976 671 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 SAFBQ15424 915 aaKnown RBP eCLIP9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 RASGRP2Q7LDG7 609 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 DDX11Q96FC9 970 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 CLMNQ96JQ2 1002 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 SLC38A10Q9HBR0 1119 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 HOXC10Q9NYD6 342 aa9.67□□□□□ -0.86
PTPDC1-201ENST00000288976 TMEM88BA6NKF7 163 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 SLC10A3P09131 477 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 YY1P25490 414 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 PPM1FP49593 454 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 KRT40Q6A162 431 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 OTUD5Q96G74 571 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 AMNQ9BXJ7 453 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 BIN2Q9UBW5 565 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 PNMA3Q9UL41 463 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 PCDHA4Q9UN74 947 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 ICAM1P05362 532 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 OSBPP22059 807 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 KRT2P35908 639 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 GJA5P36382 358 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 TTBK2Q6IQ55 1244 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 SAPCD2Q86UD0 394 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 TTC16Q8NEE8 873 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 RIC8AQ9NPQ8 531 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 UTP3Q9NQZ2 479 aaKnown RBP eCLIP9.66□□□□□ -0.862e-7■■■■■ 93.2
PTPDC1-201ENST00000288976 GNA11P29992 359 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 RESTQ13127 1097 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 REPS2Q8NFH8 660 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 CCDC102AQ96A19 550 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 VTI1AQ96AJ9 217 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 NUP88Q99567 741 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 TANGO6Q9C0B7 1094 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 MANSC4A6NHS7 340 aaPredicted RBP9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 ZBED4O75132 1171 aa9.66□□□□□ -0.86
PTPDC1-201ENST00000288976 KIF23Q02241 960 aaPredicted RBP9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms