RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 BRPF3Q9ULD4 1205 aa23.19■■□□□ 1.3
TIMP4-201ENST00000287814 SLC15A5A6NIM6 579 aa23.18■■□□□ 1.3
TIMP4-201ENST00000287814 Q6ZUG5 572 aa23.18■■□□□ 1.3
TIMP4-201ENST00000287814 IVNS1ABPQ9Y6Y0 642 aa23.18■■□□□ 1.3
TIMP4-201ENST00000287814 DDAH1O94760 285 aa23.17■■□□□ 1.3
TIMP4-201ENST00000287814 ELNP15502 786 aa23.17■■□□□ 1.3
TIMP4-201ENST00000287814 SOCS4Q8WXH5 440 aa23.17■■□□□ 1.3
TIMP4-201ENST00000287814 UPF3BQ9BZI7 483 aaKnown RBP23.17■■□□□ 1.3
TIMP4-201ENST00000287814 TM6SF1Q9BZW5 370 aa23.17■■□□□ 1.3
TIMP4-201ENST00000287814 JMJD4Q9H9V9 463 aa23.17■■□□□ 1.3
TIMP4-201ENST00000287814 VAT1LQ9HCJ6 419 aa23.17■■□□□ 1.3
TIMP4-201ENST00000287814 SLC12A7Q9Y666 1083 aa23.17■■□□□ 1.3
TIMP4-201ENST00000287814 STRNO43815 780 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 ADCY3O60266 1144 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 ICAM1P05362 532 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 ADORA2AP29274 412 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 MAP2K5Q13163 448 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 RUFY3Q7L099 469 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 MAP3K14Q99558 947 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 HOMER2Q9NSB8 354 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 COBLO75128 1261 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 GRK4P32298 578 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 SLC9C1Q4G0N8 1177 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 APOA5Q6Q788 366 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 CCDC144CPQ8IYA2 1237 aa23.16■■□□□ 1.3
TIMP4-201ENST00000287814 CYTH3O43739 400 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 EIF5BO60841 1220 aaKnown RBP23.15■■□□□ 1.3
TIMP4-201ENST00000287814 FCER1AP12319 257 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 ALAS1P13196 640 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 COPB2P35606 906 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 CCL14Q16627 93 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 NPLOC4Q8TAT6 608 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 BRF1Q92994 677 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 MMP19Q99542 508 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 AGXT2Q9BYV1 514 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 CCPG1Q9ULG6 757 aa23.15■■□□□ 1.3
TIMP4-201ENST00000287814 XRCC5P13010 732 aaKnown RBP23.14■■□□□ 1.29
TIMP4-201ENST00000287814 RGS2P41220 211 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 ANAPC15P60006 121 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 APOBRQ0VD83 1088 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 CDC37Q16543 378 aaPredicted RBP23.14■■□□□ 1.29
TIMP4-201ENST00000287814 MUM1L1Q5H9M0 696 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 MICU3Q86XE3 530 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 ABRAQ8N0Z2 381 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 FBXL16Q8N461 479 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 PXYLP1Q8TE99 480 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 ARMC5Q96C12 935 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 CYP46A1Q9Y6A2 500 aa23.14■■□□□ 1.29
TIMP4-201ENST00000287814 SMCHD1A6NHR9 2005 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 DHX16O60231 1041 aaKnown RBP23.13■■□□□ 1.29
TIMP4-201ENST00000287814 PGK2P07205 417 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 FGD1P98174 961 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 SLAIN1Q8ND83 568 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 CHST13Q8NET6 341 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 CTCFLQ8NI51 663 aaPredicted RBP23.13■■□□□ 1.29
TIMP4-201ENST00000287814 TRIB2Q92519 343 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 MTMR8Q96EF0 704 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 IL17RAQ96F46 866 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 TRERF1Q96PN7 1200 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 RIOX1Q9H6W3 641 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 RNF146Q9NTX7 359 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 FLRT1Q9NZU1 646 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 BRCA2P51587 3418 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 KLF18A0A0U1RQI7 1052 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 PLEKHA8P1O95397 391 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 HOXC6P09630 235 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 QRICH1Q2TAL8 776 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 CMTR1Q8N1G2 835 aaKnown RBP23.13■■□□□ 1.29
TIMP4-201ENST00000287814 FANCBQ8NB91 859 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 APBA2Q99767 749 aa23.13■■□□□ 1.29
TIMP4-201ENST00000287814 CALM1P0DP23 149 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 CALM2P0DP24 149 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 CALM3P0DP25 149 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 TRIM32Q13049 653 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 TOB2Q14106 344 aaPredicted RBP23.12■■□□□ 1.29
TIMP4-201ENST00000287814 KCTD2Q14681 263 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 TKFCQ3LXA3 575 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.12■■□□□ 1.29
TIMP4-201ENST00000287814 DPP9Q86TI2 863 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 SRBD1Q8N5C6 995 aaKnown RBP23.12■■□□□ 1.29
TIMP4-201ENST00000287814 ZNF333Q96JL9 665 aa23.12■■□□□ 1.29
TIMP4-201ENST00000287814 PPP1R11O60927 126 aaPredicted RBP23.11■■□□□ 1.29
TIMP4-201ENST00000287814 MYCP01106 439 aaPredicted RBP23.11■■□□□ 1.29
TIMP4-201ENST00000287814 KIF5BP33176 963 aa23.11■■□□□ 1.29
TIMP4-201ENST00000287814 SYNE3Q6ZMZ3 975 aa23.11■■□□□ 1.29
TIMP4-201ENST00000287814 ACAD9Q9H845 621 aa23.11■■□□□ 1.29
TIMP4-201ENST00000287814 FBXO40Q9UH90 709 aa23.11■■□□□ 1.29
TIMP4-201ENST00000287814 ZBTB43O43298 467 aa23.1■■□□□ 1.29
TIMP4-201ENST00000287814 USH1GQ495M9 461 aa23.1■■□□□ 1.29
TIMP4-201ENST00000287814 CLEC4DQ8WXI8 215 aa23.1■■□□□ 1.29
TIMP4-201ENST00000287814 PIGSQ96S52 555 aa23.1■■□□□ 1.29
TIMP4-201ENST00000287814 LARP6Q9BRS8 491 aaKnown RBP23.1■■□□□ 1.29
TIMP4-201ENST00000287814 FAM217BQ9NTX9 383 aaPredicted RBP23.1■■□□□ 1.29
TIMP4-201ENST00000287814 DNAJC25-GNG10A0A024R161 153 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 NFIBO00712 420 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 IGHA2P01877 340 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 INHAP05111 366 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 MTFR1Q15390 333 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 ZNF792Q3KQV3 632 aa23.09■■□□□ 1.29
TIMP4-201ENST00000287814 HOMER1Q86YM7 354 aa23.09■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms