RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 IQUBQ8NA54 791 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 C16orf45Q96MC5 204 aaPredicted RBP20.35■□□□□ 0.85
CAPN1-201ENST00000279247 BCS1LQ9Y276 419 aa20.35■□□□□ 0.85
CAPN1-201ENST00000279247 C10orf71Q711Q0 1435 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 TMEM232C9JQI7 657 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 STAT6P42226 847 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 ZNF543Q08ER8 600 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 CUL4BQ13620 913 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 LRRC8AQ8IWT6 810 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 SPICE1Q8N0Z3 855 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 C4orf32Q8N8J7 132 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 CSRNP1Q96S65 589 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 MTFR1LQ9H019 292 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 JMJD4Q9H9V9 463 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 SAMSN1Q9NSI8 373 aaKnown RBP20.34■□□□□ 0.85
CAPN1-201ENST00000279247 UBA7P41226 1012 aa20.34■□□□□ 0.85
CAPN1-201ENST00000279247 TXLNAP40222 546 aa20.33■□□□□ 0.85
CAPN1-201ENST00000279247 TECP42680 631 aa20.33■□□□□ 0.85
CAPN1-201ENST00000279247 SLC1A4P43007 532 aa20.33■□□□□ 0.85
CAPN1-201ENST00000279247 NT5C2P49902 561 aa20.33■□□□□ 0.85
CAPN1-201ENST00000279247 MORC3Q14149 939 aa20.33■□□□□ 0.85
CAPN1-201ENST00000279247 ASPRV1Q53RT3 343 aa20.33■□□□□ 0.85
CAPN1-201ENST00000279247 TRMT1Q9NXH9 659 aaKnown RBP20.33■□□□□ 0.85
CAPN1-201ENST00000279247 IGKV6D-41A0A0C4DH26 115 aa20.33■□□□□ 0.84
CAPN1-201ENST00000279247 PSMD14O00487 310 aa20.33■□□□□ 0.84
CAPN1-201ENST00000279247 SKILP12757 684 aa20.33■□□□□ 0.84
CAPN1-201ENST00000279247 NLGN2Q8NFZ4 835 aa20.33■□□□□ 0.84
CAPN1-201ENST00000279247 GJA10Q969M2 543 aa20.33■□□□□ 0.84
CAPN1-201ENST00000279247 RIOX1Q9H6W3 641 aa20.33■□□□□ 0.84
CAPN1-201ENST00000279247 IKBKBO14920 756 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 CD44P16070 742 aaKnown RBP20.32■□□□□ 0.84
CAPN1-201ENST00000279247 TXKP42681 527 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 MTRQ99707 1265 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 PPP1R11O60927 126 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-201ENST00000279247 CDC25BP30305 580 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 SARSP49591 514 aaKnown RBP20.32■□□□□ 0.84
CAPN1-201ENST00000279247 ICA1Q05084 483 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.32■□□□□ 0.84
CAPN1-201ENST00000279247 GH2P01242 217 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 ADCY7P51828 1080 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 NEK8Q86SG6 692 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 POTEDQ86YR6 584 aa20.32■□□□□ 0.84
CAPN1-201ENST00000279247 NEMFO60524 1076 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 JAG1P78504 1218 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 KRT25Q7Z3Z0 450 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 CDAN1Q8IWY9 1227 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 MED15Q96RN5 788 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 PIM2Q9P1W9 311 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 SERPINA10Q9UK55 444 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 CCDC93Q567U6 631 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 SLFN13Q68D06 897 aa20.31■□□□□ 0.84
CAPN1-201ENST00000279247 DHX36Q9H2U1 1008 aaKnown RBP20.31■□□□□ 0.84
CAPN1-201ENST00000279247 TDP2O95551 362 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 DPYDQ12882 1025 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 ABCB5Q2M3G0 1257 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 RRAGBQ5VZM2 374 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 MLKLQ8NB16 471 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 FOCADQ5VW36 1801 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 ZYXQ15942 572 aaKnown RBP20.3■□□□□ 0.84
CAPN1-201ENST00000279247 USH1GQ495M9 461 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 GALNT17Q6IS24 598 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 MIGA2Q7L4E1 593 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 DAGLBQ8NCG7 672 aa20.3■□□□□ 0.84
CAPN1-201ENST00000279247 LONP1P36776 959 aaKnown RBP20.29■□□□□ 0.84
CAPN1-201ENST00000279247 E2F4Q16254 413 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 ARL6IP4Q66PJ3 421 aaKnown RBP20.29■□□□□ 0.84
CAPN1-201ENST00000279247 CTNND2Q9UQB3 1225 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP27XA6NNY8 438 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L15C9J2P7 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L13C9JLJ4 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L11C9JVI0 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L18D6R9N7 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L22D6RA61 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L17D6RBQ6 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L19D6RCP7 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L20D6RJB6 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 OR52Z1P0C646 297 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L24Q0WX57 530 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 RBM26Q5T8P6 1007 aaKnown RBP20.29■□□□□ 0.84
CAPN1-201ENST00000279247 USP17L6PQ6QN14 398 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 OGFOD1Q8N543 542 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 SUPT20HQ8NEM7 779 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 ZNF592Q92610 1267 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 IDI2Q9BXS1 227 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 TMOD2Q9NZR1 351 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 PLIN4Q96Q06 1357 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 NOVP48745 357 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 RRP1BQ14684 758 aaKnown RBP20.29■□□□□ 0.84
CAPN1-201ENST00000279247 TPD52L1Q16890 204 aaPredicted RBP20.29■□□□□ 0.84
CAPN1-201ENST00000279247 NT5DC1Q5TFE4 455 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 PDXDC2PQ6P474 469 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 EEF2KMTQ96G04 330 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 CCDC17Q96LX7 622 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 DISC1Q9NRI5 854 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 DACH1Q9UI36 760 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 GDAQ9Y2T3 454 aa20.29■□□□□ 0.84
CAPN1-201ENST00000279247 MYH4Q9Y623 1939 aa20.28■□□□□ 0.84
CAPN1-201ENST00000279247 SNHG28P0DPA3 235 aa20.28■□□□□ 0.84
CAPN1-201ENST00000279247 DLGAP5Q15398 846 aa20.28■□□□□ 0.84
CAPN1-201ENST00000279247 CC2D2BQ6DHV5 1058 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms