RNA–Protein interactions for RNA: ENST00000275954.3

TMEM47-201, Transcript of transmembrane protein 47, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMEM47, Length 4,054 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM47-201ENST00000275954 NAPGQ99747 312 aaPredicted RBP16■□□□□ 0.15
TMEM47-201ENST00000275954 EPB41L4AQ9HCS5 686 aaPredicted RBP16■□□□□ 0.15
TMEM47-201ENST00000275954 ANKRD13CQ8N6S4 541 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 IGDCC4Q8TDY8 1250 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 CSRNP1Q96S65 589 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 FAM107BQ9H098 131 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 POTEB2H3BUK9 544 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 IKBKBO14920 756 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 KCTD1Q719H9 257 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 CCDC84Q86UT8 332 aaPredicted RBP16■□□□□ 0.15
TMEM47-201ENST00000275954 KCNF1Q9H3M0 494 aa16■□□□□ 0.15
TMEM47-201ENST00000275954 GTPBP6O43824 516 aaPredicted RBP15.99■□□□□ 0.15
TMEM47-201ENST00000275954 PRR29P0C7W0 189 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 TYW1BQ6NUM6 668 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 PRPF3O43395 683 aaKnown RBP15.99■□□□□ 0.15
TMEM47-201ENST00000275954 NF2P35240 595 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 CETN1Q12798 172 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 PTPROQ16827 1216 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 TRIML1Q8N9V2 468 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 BRIP1Q9BX63 1249 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.99■□□□□ 0.15
TMEM47-201ENST00000275954 LEMD3Q9Y2U8 911 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 RRAGAQ7L523 313 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 OR8K1Q8NGG5 319 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 CTNNBL1Q8WYA6 563 aaPredicted RBP15.99■□□□□ 0.15
TMEM47-201ENST00000275954 GSDMAQ96QA5 445 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 PSTPIP2Q9H939 334 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 EHMT1Q9H9B1 1298 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 VPS18Q9P253 973 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 PCDHA12Q9UN75 941 aa15.99■□□□□ 0.15
TMEM47-201ENST00000275954 CASP7P55210 303 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 CACNB1Q02641 598 aaPredicted RBP15.98■□□□□ 0.15
TMEM47-201ENST00000275954 LRRC41Q15345 812 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 RESP18Q5W5W9 173 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 HS2ST1Q7LGA3 356 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 CLEC10AQ8IUN9 316 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 IFT81Q8WYA0 676 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 LZTS2Q9BRK4 669 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 PAGR1Q9BTK6 254 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 PLA2G12BQ9BX93 195 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 GDAQ9Y2T3 454 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 RFX7Q2KHR2 1363 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 CYP4A11Q02928 519 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 RBL2Q08999 1139 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 CCDC174Q6PII3 467 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 TMTC3Q6ZXV5 915 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 MAATS1Q7Z4T9 603 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 TBCKQ8TEA7 893 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 JAKMIP2Q96AA8 810 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 PAGE5Q96GU1 130 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 HPS5Q9UPZ3 1129 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 SEMA3EO15041 775 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 ECE2O60344 883 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 SGMS1Q86VZ5 419 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 AMIGO3Q86WK7 504 aa15.98■□□□□ 0.15
TMEM47-201ENST00000275954 MAGEA1P43355 309 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 SNAP25P60880 206 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 CKAP4Q07065 602 aaKnown RBP15.97■□□□□ 0.15
TMEM47-201ENST00000275954 IQCB1Q15051 598 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 PRR16Q569H4 304 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 PLA2G4DQ86XP0 818 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 RDH13Q8NBN7 331 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 PCDHA4Q9UN74 947 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 SOWAHDA6NJG2 315 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 SULF1Q8IWU6 871 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 KCNB2Q92953 911 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.97■□□□□ 0.15
TMEM47-201ENST00000275954 PP2D1A8MPX8 630 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 MCM3P25205 808 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 COPB1P53618 953 aaKnown RBP15.97■□□□□ 0.15
TMEM47-201ENST00000275954 DDR1Q08345 913 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 ALX1Q15699 326 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 DHX40Q8IX18 779 aaKnown RBP15.97■□□□□ 0.15
TMEM47-201ENST00000275954 DPF2Q92785 391 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 KIFC2Q96AC6 838 aa15.97■□□□□ 0.15
TMEM47-201ENST00000275954 ADRA2BP18089 450 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 CDC25BP30305 580 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 SETQ01105 290 aaPredicted RBP15.96■□□□□ 0.15
TMEM47-201ENST00000275954 GRIN1Q05586 938 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 IFFO1Q0D2I5 559 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 NSMFQ6X4W1 530 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 STXBP4Q6ZWJ1 553 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 BICD1Q96G01 975 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 PCDHA1Q9Y5I3 950 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 ENC1O14682 589 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 PCP11498 1178 aaKnown RBP15.96■□□□□ 0.15
TMEM47-201ENST00000275954 SUPT20HQ8NEM7 779 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 ENOX1Q8TC92 643 aaKnown RBP15.96■□□□□ 0.15
TMEM47-201ENST00000275954 KCNQ5Q9NR82 932 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 UTP18Q9Y5J1 556 aaKnown RBP eCLIP15.96■□□□□ 0.15
TMEM47-201ENST00000275954 B4DLN1 442 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 CETN3O15182 167 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 AP5Z1O43299 807 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 CDK8P49336 464 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 CIAPIN1Q6FI81 312 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 STAG2Q8N3U4 1231 aa15.96■□□□□ 0.15
TMEM47-201ENST00000275954 NAA15Q9BXJ9 866 aaKnown RBP15.96■□□□□ 0.15
TMEM47-201ENST00000275954 ERCC5P28715 1186 aaPredicted RBP15.95■□□□□ 0.14
TMEM47-201ENST00000275954 CUL4BQ13620 913 aa15.95■□□□□ 0.14
TMEM47-201ENST00000275954 SAMD7Q7Z3H4 446 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms