RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 JAG1P78504 1218 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 ICA1Q05084 483 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 RRP1BQ14684 758 aaKnown RBP18.9■□□□□ 0.62
CCDC40-201ENST00000269318 DLGAP5Q15398 846 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 TRIML1Q8N9V2 468 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 SMARCE1Q969G3 411 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 HSD3B7Q9H2F3 369 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 KCNF1Q9H3M0 494 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 TMOD2Q9NZR1 351 aa18.9■□□□□ 0.62
CCDC40-201ENST00000269318 BRCA1P38398 1863 aaKnown RBP18.89■□□□□ 0.61
CCDC40-201ENST00000269318 SLC16A2P36021 539 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 PRPHP41219 470 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 SPDYE2Q495Y8 402 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 OGFOD1Q8N543 542 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 MTMR14Q8NCE2 650 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 AGBL3Q8NEM8 1001 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 CCDC34Q96HJ3 373 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 CNTNAP1P78357 1384 aa18.89■□□□□ 0.61
CCDC40-201ENST00000269318 CLRN2A0PK11 232 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 TCP10L2B9ZVM9 353 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 USP17L10C9JJH3 530 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 ZBTB5O15062 677 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 ADCY7P51828 1080 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 SLFN13Q68D06 897 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 NEK8Q86SG6 692 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 FAM151AQ8WW52 585 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 PYM1Q9BRP8 204 aaKnown RBP18.88■□□□□ 0.61
CCDC40-201ENST00000269318 MTFR1LQ9H019 292 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 BIN2Q9UBW5 565 aaPredicted RBP18.88■□□□□ 0.61
CCDC40-201ENST00000269318 HERC5Q9UII4 1024 aaKnown RBP18.88■□□□□ 0.61
CCDC40-201ENST00000269318 ATF5Q9Y2D1 282 aaPredicted RBP18.88■□□□□ 0.61
CCDC40-201ENST00000269318 DALRD3Q5D0E6 543 aaKnown RBP18.88■□□□□ 0.61
CCDC40-201ENST00000269318 JAKMIP3Q5VZ66 844 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 PDXDC2PQ6P474 469 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 DTHD1Q6ZMT9 781 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 IQUBQ8NA54 791 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 GMCL1P1Q8NEA9 526 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 TMEM260Q9NX78 707 aa18.88■□□□□ 0.61
CCDC40-201ENST00000269318 SLC1A4P43007 532 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 MYL5Q02045 173 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 CXCL9Q07325 125 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 DPYDQ12882 1025 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 FKBP1CQ5VVH2 108 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 MLKLQ8NB16 471 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 TBCKQ8TEA7 893 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 RIC8AQ9NPQ8 531 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 NRBP1Q9UHY1 535 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 FER1L6Q2WGJ9 1857 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 ARFGEF1Q9Y6D6 1849 aa18.87■□□□□ 0.61
CCDC40-201ENST00000269318 SMC2O95347 1197 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 GH2P01242 217 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 PTGS1P23219 599 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 POLD1P28340 1107 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 AFMP43652 599 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 ORC2Q13416 577 aaPredicted RBP18.86■□□□□ 0.61
CCDC40-201ENST00000269318 LETM2Q2VYF4 491 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 RBM26Q5T8P6 1007 aaKnown RBP18.86■□□□□ 0.61
CCDC40-201ENST00000269318 CCDC186Q7Z3E2 898 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 DRC7Q8IY82 874 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 ZBED3Q96IU2 234 aaPredicted RBP18.86■□□□□ 0.61
CCDC40-201ENST00000269318 F5H6K3 240 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 EDIL3O43854 480 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 CCNT1O60563 726 aaKnown RBP18.86■□□□□ 0.61
CCDC40-201ENST00000269318 CLK2P49760 499 aaKnown RBP18.86■□□□□ 0.61
CCDC40-201ENST00000269318 TPM4P67936 248 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 KLRC3Q07444 240 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 GMCL1Q96IK5 515 aa18.86■□□□□ 0.61
CCDC40-201ENST00000269318 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.86■□□□□ 0.61
CCDC40-201ENST00000269318 CDC25AP30304 524 aa18.85■□□□□ 0.61
CCDC40-201ENST00000269318 CCDC144BQ3MJ40 725 aa18.85■□□□□ 0.61
CCDC40-201ENST00000269318 MTRQ99707 1265 aa18.85■□□□□ 0.61
CCDC40-201ENST00000269318 TAOK3Q9H2K8 898 aa18.85■□□□□ 0.61
CCDC40-201ENST00000269318 SYNPO2Q9UMS6 1093 aa18.85■□□□□ 0.61
CCDC40-201ENST00000269318 NEMFO60524 1076 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 NDUFB10O96000 172 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 OR52Z1P0C646 297 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 CASP1P29466 404 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 TXLNAP40222 546 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 GSDMAQ96QA5 445 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 CCSER1Q9C0I3 900 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 NFKBIEO00221 500 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 LMOD1P29536 600 aaPredicted RBP18.84■□□□□ 0.61
CCDC40-201ENST00000269318 QRICH1Q2TAL8 776 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 DISC1Q9NRI5 854 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 DACH1Q9UI36 760 aa18.84■□□□□ 0.61
CCDC40-201ENST00000269318 A0A1W2PRG0 241 aa18.83■□□□□ 0.61
CCDC40-201ENST00000269318 PP2D1A8MPX8 630 aa18.83■□□□□ 0.61
CCDC40-201ENST00000269318 KARSQ15046 597 aaKnown RBP18.83■□□□□ 0.61
CCDC40-201ENST00000269318 FAM83AQ86UY5 434 aa18.83■□□□□ 0.61
CCDC40-201ENST00000269318 CUL5Q93034 780 aa18.83■□□□□ 0.61
CCDC40-201ENST00000269318 MYO1BO43795 1136 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 RAD21O60216 631 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 ATP1A3P13637 1013 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 FMR1Q06787 632 aaKnown RBP eCLIP18.82■□□□□ 0.6
CCDC40-201ENST00000269318 NAALADL2Q58DX5 795 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 CIAPIN1Q6FI81 312 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 AK8Q96MA6 479 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 MED15Q96RN5 788 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 SGIP1Q9BQI5 828 aa18.82■□□□□ 0.6
CCDC40-201ENST00000269318 XPO4Q9C0E2 1151 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms