RNA–Protein interactions for RNA: ENST00000249910.5

MBD4-201, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MBD4, Length 2,470 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-201ENST00000249910 ADGRF4Q8IZF3 695 aa16.7■□□□□ 0.26
MBD4-201ENST00000249910 TRMT1Q9NXH9 659 aaKnown RBP16.7■□□□□ 0.26
MBD4-201ENST00000249910 SWAP70Q9UH65 585 aa16.7■□□□□ 0.26
MBD4-201ENST00000249910 MAPK8IP1Q9UQF2 711 aa16.7■□□□□ 0.26
MBD4-201ENST00000249910 UQCRHLA0A096LP55 91 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 GDF11O95390 407 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 UQCRHP07919 91 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 SNHG28P0DPA3 235 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 GNA11P29992 359 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 CCDC96Q2M329 555 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 GALNT17Q6IS24 598 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 JMJD4Q9H9V9 463 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 INTS13Q9NVM9 706 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 PPP1R11O60927 126 aaPredicted RBP16.69■□□□□ 0.26
MBD4-201ENST00000249910 ZNF543Q08ER8 600 aa16.69■□□□□ 0.26
MBD4-201ENST00000249910 NONOQ15233 471 aaKnown RBP eCLIP16.69■□□□□ 0.26
MBD4-201ENST00000249910 REXO1Q8N1G1 1221 aaKnown RBP16.69■□□□□ 0.26
MBD4-201ENST00000249910 PLIN4Q96Q06 1357 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 USP17L10C9JJH3 530 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 RAD17O75943 681 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 LONP1P36776 959 aaKnown RBP16.68■□□□□ 0.26
MBD4-201ENST00000249910 CERKLQ49MI3 558 aaPredicted RBP16.68■□□□□ 0.26
MBD4-201ENST00000249910 NAALADL2Q58DX5 795 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 SMAP1Q8IYB5 467 aaPredicted RBP16.68■□□□□ 0.26
MBD4-201ENST00000249910 LRRC15Q8TF66 581 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 CCDC12Q8WUD4 166 aaPredicted RBP16.68■□□□□ 0.26
MBD4-201ENST00000249910 TSC1Q92574 1164 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 CCDC34Q96HJ3 373 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 EEF2P13639 858 aaKnown RBP16.68■□□□□ 0.26
MBD4-201ENST00000249910 STAT6P42226 847 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 SEPT2Q15019 361 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 ASPRV1Q53RT3 343 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 TRIML1Q8N9V2 468 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 UIMC1Q96RL1 719 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 PI4KBQ9UBF8 816 aa16.68■□□□□ 0.26
MBD4-201ENST00000249910 UBA7P41226 1012 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 TECP42680 631 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 UBE2SQ16763 222 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 ENOX1Q8TC92 643 aaKnown RBP16.67■□□□□ 0.26
MBD4-201ENST00000249910 GSDMAQ96QA5 445 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 DISC1Q9NRI5 854 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 ZBTB12Q9Y330 459 aaPredicted RBP16.67■□□□□ 0.26
MBD4-201ENST00000249910 ZNF18P17022 549 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 JAG1P78504 1218 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 NEK8Q86SG6 692 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 POTEDQ86YR6 584 aa16.67■□□□□ 0.26
MBD4-201ENST00000249910 ZNF277Q9NRM2 450 aaPredicted RBP16.67■□□□□ 0.26
MBD4-201ENST00000249910 PPP1R3GB7ZBB8 358 aa16.66■□□□□ 0.26
MBD4-201ENST00000249910 SFPQP23246 707 aaKnown RBP eCLIP16.66■□□□□ 0.26
MBD4-201ENST00000249910 SMARCA1P28370 1054 aa16.66■□□□□ 0.26
MBD4-201ENST00000249910 SNAP25P60880 206 aa16.66■□□□□ 0.26
MBD4-201ENST00000249910 TPD52L1Q16890 204 aaPredicted RBP16.66■□□□□ 0.26
MBD4-201ENST00000249910 KRT25Q7Z3Z0 450 aa16.66■□□□□ 0.26
MBD4-201ENST00000249910 ZFP91Q96JP5 570 aaPredicted RBP16.66■□□□□ 0.26
MBD4-201ENST00000249910 IDI2Q9BXS1 227 aa16.66■□□□□ 0.26
MBD4-201ENST00000249910 SERPINA10Q9UK55 444 aa16.66■□□□□ 0.26
MBD4-201ENST00000249910 CLRN2A0PK11 232 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 NEMFO60524 1076 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 TXLNAP40222 546 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 SIAH1Q8IUQ4 282 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 GJA10Q969M2 543 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 NUP88Q99567 741 aaPredicted RBP16.65■□□□□ 0.26
MBD4-201ENST00000249910 TRIM34Q9BYJ4 488 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 IMPACTQ9P2X3 320 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 DACH1Q9UI36 760 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 EDIL3O43854 480 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 TDP2O95551 362 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 TXKP42681 527 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 SLC1A4P43007 532 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 GSDMDP57764 484 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 RRAGBQ5VZM2 374 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 EHD4Q9H223 541 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 DHX36Q9H2U1 1008 aaKnown RBP16.65■□□□□ 0.26
MBD4-201ENST00000249910 GDAQ9Y2T3 454 aa16.65■□□□□ 0.26
MBD4-201ENST00000249910 TCP10L2B9ZVM9 353 aa16.64■□□□□ 0.26
MBD4-201ENST00000249910 TNNI2P48788 182 aa16.64■□□□□ 0.26
MBD4-201ENST00000249910 DHX8Q14562 1220 aaKnown RBP16.64■□□□□ 0.26
MBD4-201ENST00000249910 RRP1BQ14684 758 aaKnown RBP16.64■□□□□ 0.26
MBD4-201ENST00000249910 CREBRFQ8IUR6 639 aa16.64■□□□□ 0.26
MBD4-201ENST00000249910 MRIQ9BWK5 157 aa16.64■□□□□ 0.26
MBD4-201ENST00000249910 PNMA6FA0A0J9YX94 578 aa16.64■□□□□ 0.25
MBD4-201ENST00000249910 SLC37A4O43826 429 aa16.64■□□□□ 0.25
MBD4-201ENST00000249910 OR52Z1P0C646 297 aa16.64■□□□□ 0.25
MBD4-201ENST00000249910 ADCY7P51828 1080 aa16.64■□□□□ 0.25
MBD4-201ENST00000249910 VSTM4Q8IW00 320 aa16.64■□□□□ 0.25
MBD4-201ENST00000249910 SCAF8Q9UPN6 1271 aaKnown RBP16.64■□□□□ 0.25
MBD4-201ENST00000249910 FOCADQ5VW36 1801 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 TNNT1P13805 278 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 ERCC5P28715 1186 aaPredicted RBP16.63■□□□□ 0.25
MBD4-201ENST00000249910 TEX2Q8IWB9 1127 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 TTLL6Q8N841 843 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 CCDC17Q96LX7 622 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 CSRNP1Q96S65 589 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 CTNND2Q9UQB3 1225 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L15C9J2P7 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L13C9JLJ4 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L11C9JVI0 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L18D6R9N7 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L22D6RA61 530 aa16.63■□□□□ 0.25
MBD4-201ENST00000249910 USP17L17D6RBQ6 530 aa16.63■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 372.1 ms