RNA–Protein interactions for RNA: ENST00000243082.4

HOXC11-201, Transcript of homeobox C11, humanhuman

TSL 3 BASIC

Gene HOXC11, Length 2,039 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC11-201ENST00000243082 FANCCQ00597 558 aa20.98■□□□□ 0.95
HOXC11-201ENST00000243082 KCTD1Q719H9 257 aa20.98■□□□□ 0.95
HOXC11-201ENST00000243082 REXO1Q8N1G1 1221 aaKnown RBP20.98■□□□□ 0.95
HOXC11-201ENST00000243082 GMLQ99445 158 aa20.98■□□□□ 0.95
HOXC11-201ENST00000243082 ZNF277Q9NRM2 450 aaPredicted RBP20.98■□□□□ 0.95
HOXC11-201ENST00000243082 COL4A5P29400 1685 aa20.98■□□□□ 0.95
HOXC11-201ENST00000243082 PPP1R11O60927 126 aaPredicted RBP20.97■□□□□ 0.95
HOXC11-201ENST00000243082 RAD17O75943 681 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 PRPHP41219 470 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 FMR1Q06787 632 aaKnown RBP eCLIP20.97■□□□□ 0.95
HOXC11-201ENST00000243082 CCDC96Q2M329 555 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 JAKMIP3Q5VZ66 844 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 LARGE2Q8N3Y3 721 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 MTMR8Q96EF0 704 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 MTRQ99707 1265 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 TRIM34Q9BYJ4 488 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 FANCLQ9NW38 375 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 TMEM260Q9NX78 707 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 PSMD14O00487 310 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 SLC16A2P36021 539 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 SEPT2Q15019 361 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 LETM2Q2VYF4 491 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 NEK8Q86SG6 692 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 TBCKQ8TEA7 893 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 GSDMAQ96QA5 445 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 DACH1Q9UI36 760 aa20.97■□□□□ 0.95
HOXC11-201ENST00000243082 CCNT1O60563 726 aaKnown RBP20.96■□□□□ 0.95
HOXC11-201ENST00000243082 LRRC8AQ8IWT6 810 aa20.96■□□□□ 0.95
HOXC11-201ENST00000243082 STAMQ92783 540 aa20.96■□□□□ 0.95
HOXC11-201ENST00000243082 MED15Q96RN5 788 aa20.96■□□□□ 0.95
HOXC11-201ENST00000243082 COL2A1P02458 1487 aaPredicted RBP20.96■□□□□ 0.95
HOXC11-201ENST00000243082 SPDYE2BA6NHP3 402 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 USP17L10C9JJH3 530 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 MYO1BO43795 1136 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 SPDYE6P0CI01 402 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 ADCY7P51828 1080 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 ARID5BQ14865 1188 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 TMEM179Q6ZVK1 233 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 ENOX1Q8TC92 643 aaKnown RBP20.95■□□□□ 0.94
HOXC11-201ENST00000243082 ZBTB5O15062 677 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 GDF11O95390 407 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 TXLNAP40222 546 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 KARSQ15046 597 aaKnown RBP20.95■□□□□ 0.94
HOXC11-201ENST00000243082 PPP1R18Q6NYC8 613 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 FILIP1Q7Z7B0 1213 aa20.95■□□□□ 0.94
HOXC11-201ENST00000243082 PP2D1A8MPX8 630 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 JAG1P78504 1218 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 ABCB5Q2M3G0 1257 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 DCAF4Q8WV16 495 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 DISC1Q9NRI5 854 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 EDIL3O43854 480 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 OR52Z1P0C646 297 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 ERCC5P28715 1186 aaPredicted RBP20.94■□□□□ 0.94
HOXC11-201ENST00000243082 ICA1Q05084 483 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 RRP1BQ14684 758 aaKnown RBP20.94■□□□□ 0.94
HOXC11-201ENST00000243082 CT47A1Q5JQC4 288 aaPredicted RBP20.94■□□□□ 0.94
HOXC11-201ENST00000243082 SLFN13Q68D06 897 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 DPF2Q92785 391 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 NAP1L5Q96NT1 182 aaPredicted RBP20.94■□□□□ 0.94
HOXC11-201ENST00000243082 CSRNP1Q96S65 589 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 CCSER1Q9C0I3 900 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 VPS33BQ9H267 617 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 RIC8AQ9NPQ8 531 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 IMPACTQ9P2X3 320 aa20.94■□□□□ 0.94
HOXC11-201ENST00000243082 KIF13BQ9NQT8 1826 aa20.93■□□□□ 0.94
HOXC11-201ENST00000243082 GTPBP6O43824 516 aaPredicted RBP20.93■□□□□ 0.94
HOXC11-201ENST00000243082 NEMFO60524 1076 aa20.93■□□□□ 0.94
HOXC11-201ENST00000243082 SLC1A4P43007 532 aa20.93■□□□□ 0.94
HOXC11-201ENST00000243082 ORC2Q13416 577 aaPredicted RBP20.93■□□□□ 0.94
HOXC11-201ENST00000243082 NAALADL2Q58DX5 795 aa20.93■□□□□ 0.94
HOXC11-201ENST00000243082 BLZF1Q9H2G9 400 aa20.93■□□□□ 0.94
HOXC11-201ENST00000243082 ZBTB12Q9Y330 459 aaPredicted RBP20.93■□□□□ 0.94
HOXC11-201ENST00000243082 NFE2L3Q9Y4A8 694 aa20.93■□□□□ 0.94
HOXC11-201ENST00000243082 CD44P16070 742 aaKnown RBP20.92■□□□□ 0.94
HOXC11-201ENST00000243082 ZNF18P17022 549 aa20.92■□□□□ 0.94
HOXC11-201ENST00000243082 CLK2P49760 499 aaKnown RBP20.92■□□□□ 0.94
HOXC11-201ENST00000243082 UBASH3AP57075 661 aa20.92■□□□□ 0.94
HOXC11-201ENST00000243082 CUL4BQ13620 913 aa20.92■□□□□ 0.94
HOXC11-201ENST00000243082 TRMT44Q8IYL2 757 aaKnown RBP20.92■□□□□ 0.94
HOXC11-201ENST00000243082 TCP10L2B9ZVM9 353 aa20.92■□□□□ 0.94
HOXC11-201ENST00000243082 STAT6P42226 847 aa20.92■□□□□ 0.94
HOXC11-201ENST00000243082 TMC6Q7Z403 805 aa20.92■□□□□ 0.94
HOXC11-201ENST00000243082 ZNF70Q9UC06 446 aaPredicted RBP20.92■□□□□ 0.94
HOXC11-201ENST00000243082 CLRN2A0PK11 232 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 RAD21O60216 631 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 SERPINC1P01008 464 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 UBA7P41226 1012 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 DLGAP5Q15398 846 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 AK8Q96MA6 479 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 TMOD2Q9NZR1 351 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 HDAC9Q9UKV0 1011 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 ZNRF3Q9ULT6 936 aa20.91■□□□□ 0.94
HOXC11-201ENST00000243082 PPP1R3GB7ZBB8 358 aa20.9■□□□□ 0.94
HOXC11-201ENST00000243082 F5H6K3 240 aa20.9■□□□□ 0.94
HOXC11-201ENST00000243082 GH2P01242 217 aa20.9■□□□□ 0.94
HOXC11-201ENST00000243082 GSDMDP57764 484 aa20.9■□□□□ 0.94
HOXC11-201ENST00000243082 KLRC3Q07444 240 aa20.9■□□□□ 0.94
HOXC11-201ENST00000243082 RBM26Q5T8P6 1007 aaKnown RBP20.9■□□□□ 0.94
HOXC11-201ENST00000243082 RRAGBQ5VZM2 374 aa20.9■□□□□ 0.94
HOXC11-201ENST00000243082 GMCL1P1Q8NEA9 526 aa20.9■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms