RNA–Protein interactions for RNA: ENST00000233084.7

DDX1-201, Transcript of DEAD-box helicase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX1, Length 2,739 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1-201ENST00000233084 CCDC85AQ96PX6 553 aaPredicted RBP17.63■□□□□ 0.41
DDX1-201ENST00000233084 TACO1Q9BSH4 297 aaKnown RBP17.63■□□□□ 0.41
DDX1-201ENST00000233084 SENP2Q9HC62 589 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 DDX20Q9UHI6 824 aaKnown RBP17.63■□□□□ 0.41
DDX1-201ENST00000233084 RPSAP08865 295 aaKnown RBP17.63■□□□□ 0.41
DDX1-201ENST00000233084 BIRC2Q13490 618 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 CDKAL1Q5VV42 579 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 TEX11Q8IYF3 940 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 TRIML1Q8N9V2 468 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 NCOA7Q8NI08 942 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 RNF217Q8TC41 542 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 RNPC3Q96LT9 517 aaKnown RBP17.63■□□□□ 0.41
DDX1-201ENST00000233084 TFCP2L1Q9NZI6 479 aa17.63■□□□□ 0.41
DDX1-201ENST00000233084 MACROD2A1Z1Q3 448 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 ACTN4O43707 911 aaKnown RBP17.62■□□□□ 0.41
DDX1-201ENST00000233084 IDEP14735 1019 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 LSP1P33241 339 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 NNTQ13423 1086 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 MICALCLQ6ZW33 695 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 NKX2-3Q8TAU0 364 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 SETDB2Q96T68 719 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 PSMB7Q99436 277 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 VCPKMTQ9H867 229 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 FBXO2Q9UK22 296 aaPredicted RBP17.62■□□□□ 0.41
DDX1-201ENST00000233084 DUSP10Q9Y6W6 482 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 QSER1Q2KHR3 1735 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 HSF2BPO75031 334 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 HDLBPQ00341 1268 aaKnown RBP17.62■□□□□ 0.41
DDX1-201ENST00000233084 CCDC70Q6NSX1 233 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 ZNF473Q8WTR7 871 aaKnown RBP17.62■□□□□ 0.41
DDX1-201ENST00000233084 GREM2Q9H772 168 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 KCNJ14Q9UNX9 436 aa17.62■□□□□ 0.41
DDX1-201ENST00000233084 SPEF2Q9C093 1822 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 TOB1P50616 345 aaPredicted RBP17.61■□□□□ 0.41
DDX1-201ENST00000233084 SMTNP53814 917 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 HERVK_113P62684 666 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 CUL4BQ13620 913 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 ERFEQ4G0M1 354 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 PAPD7Q5XG87 772 aaKnown RBP17.61■□□□□ 0.41
DDX1-201ENST00000233084 ZNF594Q96JF6 807 aaPredicted RBP17.61■□□□□ 0.41
DDX1-201ENST00000233084 CCDC114Q96M63 670 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 HAUS4Q9H6D7 363 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 IFIT1P09914 478 aaKnown RBP17.61■□□□□ 0.41
DDX1-201ENST00000233084 FECHP22830 423 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 IARSP41252 1262 aaKnown RBP17.61■□□□□ 0.41
DDX1-201ENST00000233084 DPYDQ12882 1025 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 CCDC82Q8N4S0 544 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 SLC26A6Q9BXS9 759 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 CSRNP2Q9H175 543 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 SMARCAL1Q9NZC9 954 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 PCDHB6Q9Y5E3 794 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 ABCC12Q96J65 1359 aa17.61■□□□□ 0.41
DDX1-201ENST00000233084 ATP2C2O75185 946 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 RASSF9O75901 435 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 SKOR1P84550 965 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 NFIXQ14938 502 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 NAA25Q14CX7 972 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 FBXL16Q8N461 479 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 RPGRIP1Q96KN7 1286 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 ZIM3Q96PE6 472 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 TRIM6Q9C030 488 aaPredicted RBP17.6■□□□□ 0.41
DDX1-201ENST00000233084 TAF1P21675 1872 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 FOXP2O15409 715 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 PPP1R12BO60237 982 aaPredicted RBP17.6■□□□□ 0.41
DDX1-201ENST00000233084 PDE6BP35913 854 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 SNCBQ16143 134 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 DEFB132Q7Z7B7 95 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 COL23A1Q86Y22 540 aaPredicted RBP17.6■□□□□ 0.41
DDX1-201ENST00000233084 NOSTRINQ8IVI9 506 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 LACRTQ9GZZ8 138 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 LRP5O75197 1615 aa17.6■□□□□ 0.41
DDX1-201ENST00000233084 COL4A1P02462 1669 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 TNRC6CQ9HCJ0 1690 aaKnown RBP17.59■□□□□ 0.41
DDX1-201ENST00000233084 RCCD1A6NED2 376 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 ZNF213O14771 459 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 PTPREP23469 700 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 UBXN1Q04323 297 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 CCDC57Q2TAC2 916 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 WLSQ5T9L3 541 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 ATG9AQ7Z3C6 839 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 EPN3Q9H201 632 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 A0A087X0B3 334 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 RANBP6O60518 1105 aaKnown RBP17.59■□□□□ 0.41
DDX1-201ENST00000233084 ITGA6P23229 1130 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 NFXL1Q6ZNB6 911 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 EPSTI1Q96J88 318 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 CCT8L2Q96SF2 557 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 MAPK8IP1Q9UQF2 711 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 ITIH6Q6UXX5 1313 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 PNPLA7Q6ZV29 1317 aa17.59■□□□□ 0.41
DDX1-201ENST00000233084 TTC26A0AVF1 554 aa17.58■□□□□ 0.41
DDX1-201ENST00000233084 E7EVH7 732 aa17.58■□□□□ 0.41
DDX1-201ENST00000233084 CDKL5O76039 1030 aa17.58■□□□□ 0.41
DDX1-201ENST00000233084 IFIT5Q13325 482 aaKnown RBP17.58■□□□□ 0.41
DDX1-201ENST00000233084 NBPF5PQ86XG9 351 aaPredicted RBP17.58■□□□□ 0.41
DDX1-201ENST00000233084 SPATS2Q86XZ4 545 aaKnown RBP17.58■□□□□ 0.41
DDX1-201ENST00000233084 EHD2Q9NZN4 543 aa17.58■□□□□ 0.41
DDX1-201ENST00000233084 ATXN2Q99700 1313 aaKnown RBP17.58■□□□□ 0.41
DDX1-201ENST00000233084 CXCR5P32302 372 aa17.58■□□□□ 0.4
DDX1-201ENST00000233084 COPB1P53618 953 aaKnown RBP17.58■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms