RNA–Protein interactions for RNA: ENST00000218348.7

USP11-201, Transcript of ubiquitin specific peptidase 11, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene USP11, Length 3,338 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-201ENST00000218348 ECE2O60344 883 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 NAPAP54920 295 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 RHBDL3P58872 404 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 KARSQ15046 597 aaKnown RBP11.31□□□□□ -0.6
USP11-201ENST00000218348 PFKFB3Q16875 520 aaPredicted RBP11.31□□□□□ -0.6
USP11-201ENST00000218348 FAM177A1Q8N128 213 aaPredicted RBP11.31□□□□□ -0.6
USP11-201ENST00000218348 COA7Q96BR5 231 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 PIGSQ96S52 555 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 CEP131Q9UPN4 1083 aa11.31□□□□□ -0.6
USP11-201ENST00000218348 FGRP09769 529 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 AKR1B1P15121 316 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 LETM2Q2VYF4 491 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 BLIDQ8IZY5 108 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 CPLX3Q8WVH0 158 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 BIN2Q9UBW5 565 aaPredicted RBP11.3□□□□□ -0.6
USP11-201ENST00000218348 NFE2L3Q9Y4A8 694 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 NAV1Q8NEY1 1877 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 VIL1P09327 827 aaKnown RBP11.3□□□□□ -0.6
USP11-201ENST00000218348 TIGD1Q96MW7 591 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 PPP1R1BQ9UD71 204 aaPredicted RBP11.3□□□□□ -0.6
USP11-201ENST00000218348 ZNF541Q9H0D2 1346 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 GPR75-ASB3A0A0A6YYF3 556 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 CAVIN2O95810 425 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 SNAP25P60880 206 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 MYL5Q02045 173 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 IL17AQ16552 155 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 PODNQ7Z5L7 613 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 SUPT20HQ8NEM7 779 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 GJA10Q969M2 543 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 ZBED3Q96IU2 234 aaPredicted RBP11.3□□□□□ -0.6
USP11-201ENST00000218348 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 TMEM260Q9NX78 707 aa11.3□□□□□ -0.6
USP11-201ENST00000218348 MYH6P13533 1939 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 SLC20A2Q08357 652 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 ZNF710Q8N1W2 664 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 SMTNL1A8MU46 457 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 ACTN4O43707 911 aaKnown RBP11.29□□□□□ -0.6
USP11-201ENST00000218348 PARP1P09874 1014 aaKnown RBP11.29□□□□□ -0.6
USP11-201ENST00000218348 TTBK2Q6IQ55 1244 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 KCTD1Q719H9 257 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 RNF217Q8TC41 542 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 MRFAP1L1Q96HT8 127 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 HSD3B7Q9H2F3 369 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.29□□□□□ -0.6
USP11-201ENST00000218348 TUBE1Q9UJT0 475 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 V9GYY5 206 aaPredicted RBP11.29□□□□□ -0.6
USP11-201ENST00000218348 PES1O00541 588 aaKnown RBP11.29□□□□□ -0.6
USP11-201ENST00000218348 TAL1P17542 331 aaPredicted RBP11.29□□□□□ -0.6
USP11-201ENST00000218348 NAA30Q147X3 362 aaPredicted RBP11.29□□□□□ -0.6
USP11-201ENST00000218348 CCDC96Q2M329 555 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 DGKHQ86XP1 1220 aa11.29□□□□□ -0.6
USP11-201ENST00000218348 RIOK3O14730 519 aaKnown RBP11.28□□□□□ -0.6
USP11-201ENST00000218348 PPP4CP60510 307 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 MDM2Q00987 491 aaPredicted RBP11.28□□□□□ -0.6
USP11-201ENST00000218348 STRIP1Q5VSL9 837 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 ARMCX5Q6P1M9 558 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 PAGE5Q96GU1 130 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 HOOK1Q9UJC3 728 aaKnown RBP11.28□□□□□ -0.6
USP11-201ENST00000218348 GREB1LQ9C091 1923 aaPredicted RBP11.28□□□□□ -0.6
USP11-201ENST00000218348 SMCO2A6NFE2 343 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 PCP11498 1178 aaKnown RBP11.28□□□□□ -0.6
USP11-201ENST00000218348 PPP2R5BQ15173 497 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 SARM1Q6SZW1 724 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 MTA3Q9BTC8 594 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 GAKO14976 1311 aa11.28□□□□□ -0.6
USP11-201ENST00000218348 CCNT1O60563 726 aaKnown RBP11.27□□□□□ -0.6
USP11-201ENST00000218348 TPM3P06753 285 aa11.27□□□□□ -0.6
USP11-201ENST00000218348 CD44P16070 742 aaKnown RBP11.27□□□□□ -0.6
USP11-201ENST00000218348 ERCC3P19447 782 aa11.27□□□□□ -0.6
USP11-201ENST00000218348 LMNB1P20700 586 aa11.27□□□□□ -0.6
USP11-201ENST00000218348 SFPQP23246 707 aaKnown RBP eCLIP11.27□□□□□ -0.6
USP11-201ENST00000218348 ADKP55263 362 aaKnown RBP11.27□□□□□ -0.6
USP11-201ENST00000218348 CUL4BQ13620 913 aa11.27□□□□□ -0.6
USP11-201ENST00000218348 GRM4Q14833 912 aa11.27□□□□□ -0.6
USP11-201ENST00000218348 DNAJC21Q5F1R6 531 aaKnown RBP11.27□□□□□ -0.6
USP11-201ENST00000218348 TNFRSF25Q93038 417 aa11.27□□□□□ -0.6
USP11-201ENST00000218348 ZNRF3Q9ULT6 936 aa11.27□□□□□ -0.6
USP11-201ENST00000218348 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.27□□□□□ -0.61
USP11-201ENST00000218348 MED15Q96RN5 788 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 SEC63Q9UGP8 760 aaKnown RBP11.27□□□□□ -0.61
USP11-201ENST00000218348 GDF11O95390 407 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 CCT6AP40227 531 aaKnown RBP11.27□□□□□ -0.61
USP11-201ENST00000218348 CXCL9Q07325 125 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 CDC42EP5Q6NZY7 148 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 C16orf86Q6ZW13 317 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 PCDHA6Q9UN73 950 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 PCDHA4Q9UN74 947 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 PCDHA8Q9Y5H6 950 aa11.27□□□□□ -0.61
USP11-201ENST00000218348 ZC3H4Q9UPT8 1303 aaKnown RBP11.27□□□□□ -0.61
USP11-201ENST00000218348 POTECB2RU33 542 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 PPIP5K2O43314 1243 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 RCAN1P53805 252 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 UBE2SQ16763 222 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 RRAGBQ5VZM2 374 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 GPIHBP1Q8IV16 184 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 FAM163AQ96GL9 167 aaPredicted RBP11.26□□□□□ -0.61
USP11-201ENST00000218348 PRDM16Q9HAZ2 1276 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 CTNND2Q9UQB3 1225 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 STXBP3O00186 592 aa11.26□□□□□ -0.61
USP11-201ENST00000218348 GTF2A1P52655 376 aaPredicted RBP11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms