RNA–Protein interactions for RNA: ENSMUST00000030205.13

Ttc39b-201, Transcript of Tetratricopeptide repeat protein 39B, mousemouse

TSL 1 (best) BASIC

Gene Ttc39b, Length 842 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ttc39b-201ENSMUST00000030205 Alas1Q8VC19 642 aa23.57■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Cnot6lQ8VEG6 555 aa23.57■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Prom1O54990 867 aa23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 MecomP14404 1042 aa23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Kiaa1328Q6NZK5 612 aa23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Mrpl58Q8R035 206 aa23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Zcchc18Q8VD24 393 aa23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Lrrfip2Q91WK0 415 aa23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 StrbpQ91WM1 672 aaKnown RBP23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Sppl3Q9CUS9 384 aa23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 PhaxQ9JJT9 385 aaKnown RBP23.56■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Kif20aP97329 887 aa23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Peg10Q7TN75 958 aaKnown RBP23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Sap130Q8BIH0 1057 aa23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Nup88Q8CEC0 753 aaKnown RBP23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Snx29Q9D3S3 818 aa23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Hic1Q9R1Y5 733 aa23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Tle2Q9WVB2 767 aa23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Mbd3Q9Z2D8 285 aaKnown RBP23.55■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Stx8O88983 236 aa23.54■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Cd72P21855 354 aa23.54■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Cnksr3Q8BMA3 555 aa23.54■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Mad2l2Q9D752 211 aa23.54■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Sall1Q9ER74 1322 aa23.54■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Szt2A2A9C3 3431 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 TroapB7ZNG4 668 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Casp12O08736 419 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Art2aP17981 287 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Eepd1Q3TGW2 569 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Trappc3lQ4KL14 181 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Spty2d1Q68FG3 682 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Mcph1Q7TT79 822 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Armc6Q8BNU0 468 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 GneQ91WG8 722 aaKnown RBP23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Sil1Q9EPK6 465 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 ArcQ9WV31 396 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Cntnap2Q9CPW0 1332 aa23.53■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Dpf3P58269 378 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Adamts10P58459 1104 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 NfibP97863 570 aaKnown RBP23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Neurl1bQ0MW30 546 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Phlda1Q62392 405 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Kank4Q6P9J5 1016 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Cetn4Q8K4K1 168 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Slc12a8Q8VI23 705 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Usp26Q99MX1 835 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Atp1a4Q9WV27 1032 aa23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 IkQ9Z1M8 557 aaKnown RBP23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Obsl1D3YYU8 1804 aaKnown RBP23.52■■□□□ 1.36
Ttc39b-201ENSMUST00000030205 Trim12cD3Z3L3 497 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Brd1E9PZ26 1189 aaKnown RBP23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Ephb4P54761 987 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Kifap3P70188 793 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Samhd1Q60710 627 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Cnga2Q62398 664 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Pgm5Q8BZF8 567 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Galk1Q9R0N0 392 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Rnf123Q5XPI3 1314 aa23.51■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Ppfia1B2RXQ2 1266 aa23.5■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Tp53i13Q5F267 385 aa23.5■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Defa-rs10Q64263 91 aa23.5■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Oxnad1Q8VE38 311 aa23.5■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 GldcQ91W43 1025 aa23.5■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Mcoln1Q99J21 580 aa23.5■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Tmem39aQ9CYC3 486 aa23.5■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Sbf2E9PXF8 1872 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 AW822073A0A0N4SUK1 652 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Gm30191A0A0U1RNT7 187 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Dnajc25A2ALW5 357 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Prr16A3KMN5 304 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Gm20503G3UZK1 150 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Tlk2O55047 718 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Hps5P59438 1126 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Rnpc3Q3UZ01 514 aaKnown RBP23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Ces3aQ63880 571 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Vps53Q8CCB4 832 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Atad2Q8CDM1 1040 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Pus7lQ8CE46 702 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Vmn1r191Q8K4D0 298 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Ces3bQ8VCU1 571 aa23.49■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Supt3B0QZW4 406 aa23.48■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Prl7a2O54831 253 aa23.48■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 NeflP08551 543 aa23.48■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Scg2Q03517 617 aa23.48■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 PcQ05920 1178 aa23.48■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Krt84Q99M73 603 aa23.48■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Zbtb43Q9DAI4 467 aa23.48■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Otud7bB2RUR8 840 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Dnaaf5B9EJR8 853 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Cyp3a59D3Z2W7 503 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Lnx1O70263 728 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Cnnm2Q3TWN3 875 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Fscn1Q61553 493 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Zfp943Q6NZP4 507 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Etv3Q8R4Z4 513 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Lamb2Q61292 1799 aa23.47■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 CatspereP0DP43 985 aa23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Phka1P18826 1241 aa23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 Glud1P26443 558 aaKnown RBP23.46■■□□□ 1.35
Ttc39b-201ENSMUST00000030205 TbcaP48428 108 aaKnown RBP23.46■■□□□ 1.35
Retrieved 100 of 22,080 RNA–protein pairs in 15.3 ms