RNA–Protein interactions for RNA: ENSMUST00000003857.6

Shkbp1-201, Transcript of SH3KBP1-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shkbp1, Length 2,358 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shkbp1-201ENSMUST00000003857 Znf667Q2TL60 609 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Sema4bQ62179 823 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Cracr2bQ80ZJ8 394 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Dlg1Q811D0 905 aaKnown RBP21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Dbndd2Q9CRD4 158 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tktl2Q9D4D4 627 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Clip2Q9Z0H8 1047 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tbc1d2bQ3U0J8 965 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tmem35bQ3U0Y2 150 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ttll12Q3UDE2 639 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 MmeQ61391 750 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Pip5kl1Q6U7H8 395 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tpcn1Q9EQJ0 817 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tmem47Q9JJG6 181 aa21■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Togaram1Q6A070 1776 aaKnown RBP20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Trap1aP19473 224 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tcp11Q01755 566 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Cyp4f39Q8BGU0 532 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ccdc73Q8CDM4 1066 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Hs2st1Q8R3H7 356 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Exoc1Q8R3S6 894 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 AdarQ99MU3 1178 aaKnown RBP20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Syce1Q9D495 329 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Prl2c5Q9JLV9 222 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Mtmr9Q9Z2D0 545 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Lrrc4bP0C192 709 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 AgtP11859 477 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tmem232Q5K6N0 675 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Kdm1aQ6ZQ88 853 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Rasgrp4Q8BTM9 673 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ppp2r5dQ91V89 594 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Cabp7Q91ZM8 215 aa20.99■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ltbp2O08999 1813 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Rgs22G3UYX5 1258 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Spg7Q3ULF4 781 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Nsrp1Q5NCR9 542 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ccna1Q61456 421 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Mtss1lQ6P9S0 715 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tmem179Q8BHH9 233 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Cep95Q8BVV7 827 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Trim9Q8C7M3 817 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 HmcesQ8R1M0 353 aaKnown RBP20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Snrnp35Q9D384 244 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Chd5A2A8L1 1946 aa20.98■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Gm3893E9Q1I1 302 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tubb5P99024 444 aaKnown RBP20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Zmynd15Q8C0R7 736 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Myl6bQ8CI43 207 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Golga5Q9QYE6 729 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 GakQ99KY4 1305 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Sec14l1A8Y5H7 715 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Top1Q04750 767 aaKnown RBP20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ccdc34Q3UI66 367 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ccdc93Q7TQK5 629 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Nek5Q7TSC3 627 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Pramel6Q810Y9 485 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Efhd1Q9D4J1 240 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Cbx8Q9QXV1 362 aa20.97■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Pip4k2aO70172 405 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Nol4P60954 483 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tmed8Q3UHI4 326 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Slc9a2Q3ZAS0 814 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Gpt2Q8BGT5 522 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Dclk3Q8BWQ5 790 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ppp1r3gQ9CW07 347 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tmem192Q9CXT7 266 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 ToporslQ9D2F8 683 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Rai14Q9EP71 979 aaKnown RBP20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Pkd2l2Q9JLG4 621 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Git2Q9JLQ2 708 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Etnk2A7MCT6 385 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Arid4aF8VPQ2 1261 aaKnown RBP20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Ube3aO08759 870 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Meis3P97368 378 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Kif22Q3V300 660 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Foxn3Q499D0 457 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Papd7Q6PB75 542 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 WhrnQ80VW5 918 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Lzts2Q91YU6 671 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Tor1aip1Q921T2 595 aaKnown RBP20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Krt82Q99M74 516 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 Fsip1Q9D3V5 435 aa20.96■□□□□ 0.95
Shkbp1-201ENSMUST00000003857 PurbO35295 324 aaKnown RBP20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Rfc1P35601 1131 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ppp4cP97470 307 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Psg29Q3URN6 468 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Rc3h1Q4VGL6 1130 aaKnown RBP20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ddx3yQ62095 658 aaKnown RBP20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Vmn1r218Q8R261 298 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Syf2Q9D198 242 aaKnown RBP20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Arpp21Q9DCB4 807 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Pabpc1lA2A5N3 607 aaKnown RBP20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Bpifb4A2BGH0 617 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Msh3P13705 1091 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Ell2Q3UKU1 639 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Sar1bQ9CQC9 198 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Nup188Q6ZQH8 1759 aa20.95■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Snx12O70493 165 aa20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Cct6aP80317 531 aaKnown RBP20.94■□□□□ 0.94
Shkbp1-201ENSMUST00000003857 Lrrfip1Q3UZ39 729 aaKnown RBP20.94■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 74.6 ms