RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 RER1P25560 188 aa1.46□□□□□ -2.18
snR55snR55 GCD7P32502 381 aaPredicted RBP1.46□□□□□ -2.18
snR55snR55 ECM15P35195 104 aa1.46□□□□□ -2.18
snR55snR55 SWD3P38123 315 aa1.46□□□□□ -2.18
snR55snR55 FPR3P38911 411 aaKnown RBP1.46□□□□□ -2.18
snR55snR55 CTF18P49956 741 aa1.46□□□□□ -2.18
snR55snR55 BTN2P53286 410 aa1.46□□□□□ -2.18
snR55snR55 WSC2P53832 503 aa1.46□□□□□ -2.18
snR55snR55 DIC1Q06143 298 aa1.46□□□□□ -2.18
snR55snR55 VAM6Q07468 1049 aa1.46□□□□□ -2.18
snR55snR55 HNT3Q08702 217 aa1.46□□□□□ -2.18
snR55snR55 RDR1Q08904 546 aa1.46□□□□□ -2.18
snR55snR55 YOR387CQ08910 206 aa1.46□□□□□ -2.18
snR55snR55 RRP6Q12149 733 aaKnown RBP1.46□□□□□ -2.18
snR55snR55 RRP12Q12754 1228 aaKnown RBP1.46□□□□□ -2.18
snR55snR55 MRC1P25588 1096 aa1.45□□□□□ -2.18
snR55snR55 SAC6P32599 642 aaKnown RBP1.45□□□□□ -2.18
snR55snR55 YME1P32795 747 aa1.45□□□□□ -2.18
snR55snR55 UBA4P38820 440 aa1.45□□□□□ -2.18
snR55snR55 PEX14P53112 341 aa1.45□□□□□ -2.18
snR55snR55 MSO1P53604 210 aaKnown RBP1.45□□□□□ -2.18
snR55snR55 SAM50P53969 484 aa1.45□□□□□ -2.18
snR55snR55 TMS1Q12116 473 aa1.45□□□□□ -2.18
snR55snR55 HRT3Q12347 344 aa1.45□□□□□ -2.18
snR55snR55 FAB1P34756 2278 aa1.45□□□□□ -2.18
snR55snR55 SEC62P21825 274 aa1.44□□□□□ -2.18
snR55snR55 RNA14P25298 677 aaKnown RBP1.44□□□□□ -2.18
snR55snR55 PGS1P25578 521 aa1.44□□□□□ -2.18
snR55snR55 YCR022CP25620 114 aa1.44□□□□□ -2.18
snR55snR55 PMU1P36069 295 aa1.44□□□□□ -2.18
snR55snR55 YBR138CP38277 524 aa1.44□□□□□ -2.18
snR55snR55 FSH1P38777 243 aaKnown RBP1.44□□□□□ -2.18
snR55snR55 YIL161WP40449 235 aaKnown RBP1.44□□□□□ -2.18
snR55snR55 ATG9Q12142 997 aa1.44□□□□□ -2.18
snR55snR55 SPT15P13393 240 aaKnown RBP1.43□□□□□ -2.18
snR55snR55 VPS17P32913 551 aa1.43□□□□□ -2.18
snR55snR55 TUL1P36096 758 aa1.43□□□□□ -2.18
snR55snR55 VPS52P39904 641 aa1.43□□□□□ -2.18
snR55snR55 YGR210CP42942 411 aa1.43□□□□□ -2.18
snR55snR55 NNF2P53253 936 aa1.43□□□□□ -2.18
snR55snR55 MOT3P54785 490 aaKnown RBP1.43□□□□□ -2.18
snR55snR55 RNY1Q02933 434 aaKnown RBP1.43□□□□□ -2.18
snR55snR55 SNF3P10870 884 aa1.42□□□□□ -2.18
snR55snR55 ATR1P13090 542 aa1.42□□□□□ -2.18
snR55snR55 CLN3P13365 580 aa1.42□□□□□ -2.18
snR55snR55 CMK1P27466 446 aaKnown RBP1.42□□□□□ -2.18
snR55snR55 SNC1P31109 117 aa1.42□□□□□ -2.18
snR55snR55 ESL2P36168 1195 aa1.42□□□□□ -2.18
snR55snR55 CPR6P53691 371 aaKnown RBP1.42□□□□□ -2.18
snR55snR55 IGO1P53897 168 aa1.42□□□□□ -2.18
snR55snR55 RLI1Q03195 608 aaKnown RBP1.42□□□□□ -2.18
snR55snR55 RRG7Q08774 242 aaPredicted RBP1.42□□□□□ -2.18
snR55snR55 RBD2Q12270 262 aa1.42□□□□□ -2.18
snR55snR55 ERV2Q12284 196 aa1.42□□□□□ -2.18
snR55snR55 YOL114CQ12322 202 aa1.42□□□□□ -2.18
snR55snR55 ATP2P00830 511 aaKnown RBP1.41□□□□□ -2.18
snR55snR55 AMD1P15274 810 aaKnown RBP1.41□□□□□ -2.18
snR55snR55 SPO16P17122 198 aa1.41□□□□□ -2.18
snR55snR55 SGV1P23293 657 aaKnown RBP1.41□□□□□ -2.18
snR55snR55 FUN19P28003 413 aaPredicted RBP1.41□□□□□ -2.18
snR55snR55 DEG1P31115 442 aaKnown RBP1.41□□□□□ -2.18
snR55snR55 APM3P38153 483 aa1.41□□□□□ -2.18
snR55snR55 SPC72P39723 622 aa1.41□□□□□ -2.18
snR55snR55 YGL082WP53155 381 aa1.41□□□□□ -2.18
snR55snR55 ZDS2P54786 942 aa1.41□□□□□ -2.18
snR55snR55 CSR1Q06705 408 aaKnown RBP1.41□□□□□ -2.18
snR55snR55 SSK1Q07084 712 aa1.41□□□□□ -2.18
snR55snR55 ENT4Q07872 247 aa1.41□□□□□ -2.18
snR55snR55 PUT3P25502 979 aaPredicted RBP1.4□□□□□ -2.19
snR55snR55 SRB5P32585 307 aa1.4□□□□□ -2.19
snR55snR55 ANS1P38832 159 aa1.4□□□□□ -2.19
snR55snR55 NPR2P39923 615 aa1.4□□□□□ -2.19
snR55snR55 PKP1P40530 394 aa1.4□□□□□ -2.19
snR55snR55 RPS10BP46784 105 aaKnown RBP1.4□□□□□ -2.19
snR55snR55 PYK2P52489 506 aaKnown RBP1.4□□□□□ -2.19
snR55snR55 STR3P53101 465 aaKnown RBP1.4□□□□□ -2.19
snR55snR55 INN1P53901 409 aa1.4□□□□□ -2.19
snR55snR55 YVH1Q02256 364 aaKnown RBP1.4□□□□□ -2.19
snR55snR55 ELP3Q02908 557 aaKnown RBP1.4□□□□□ -2.19
snR55snR55 MRPL35Q06678 367 aa1.4□□□□□ -2.19
snR55snR55 BRE1Q07457 700 aaKnown RBP1.4□□□□□ -2.19
snR55snR55 PIF1P07271 859 aa1.39□□□□□ -2.19
snR55snR55 MIS1P09440 975 aaKnown RBP1.39□□□□□ -2.19
snR55snR55 YBL059WP34224 193 aa1.39□□□□□ -2.19
snR55snR55 YNK1P36010 153 aaKnown RBP1.39□□□□□ -2.19
snR55snR55 NDT80P38830 627 aa1.39□□□□□ -2.19
snR55snR55 SNG1P46950 547 aa1.39□□□□□ -2.19
snR55snR55 YNR061CP53747 219 aa1.39□□□□□ -2.19
snR55snR55 IST1P53843 298 aaPredicted RBP1.39□□□□□ -2.19
snR55snR55 CSL4P53859 292 aaPredicted RBP1.39□□□□□ -2.19
snR55snR55 TEP1P53916 434 aa1.39□□□□□ -2.19
snR55snR55 YPL014WQ02606 381 aa1.39□□□□□ -2.19
snR55snR55 TRS130Q03660 1102 aa1.39□□□□□ -2.19
snR55snR55 TSA2Q04120 196 aa1.39□□□□□ -2.19
snR55snR55 ADH2P00331 348 aaKnown RBP1.38□□□□□ -2.19
snR55snR55 PAF1P38351 445 aa1.38□□□□□ -2.19
snR55snR55 LAG1P38703 411 aa1.38□□□□□ -2.19
snR55snR55 CSM2P40465 213 aa1.38□□□□□ -2.19
snR55snR55 YIL067CP40514 678 aa1.38□□□□□ -2.19
snR55snR55 SMC3P47037 1230 aa1.38□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 23.7 ms