RNA–Protein interactions for RNA: YPL190C

NAB3, Transcript of RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p), yeast

Gene NAB3, Length 2,409 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NAB3	YPL190C	ASP3-3	P0CX78	362 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	ASP3-4	P0CX79	362 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	ASP3-1	P0CZ17	362 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	RPS17B	P14127	136 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	ILV6	P25605	309 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	ERG3	P32353	365 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	NIP1	P32497	812 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	SKG6	P32900	734 aa	Predicted RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	APE3	P37302	537 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	MSG5	P38590	489 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	YMR134W	P40207	237 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	SNZ3	P43545	298 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	SCS3	P53012	380 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	PEF1	P53238	335 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	SNZ2	P53824	298 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	MRPL22	P53881	309 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	SHR3	Q02774	210 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	YMR102C	Q03177	834 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	MUS81	Q04149	632 aa	Predicted RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	KAP95	Q06142	861 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	ADY3	Q07732	790 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	ABP140	Q08641	628 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	ICL2	Q12031	575 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	NCA2	Q12374	616 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	SWM1	Q12379	170 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	KCS1	Q12494	1050 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	COX4	P04037	155 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	RAD10	P06838	210 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	POX1	P13711	748 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	PUT4	P15380	627 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	HEM15	P16622	393 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	KAR3	P17119	729 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	PRE10	P21242	288 aa	Known RBP RIP-Chip data	2.77	□□□□□ -1.97	not detected
NAB3	YPL190C	ADE2	P21264	571 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	SIR1	P21691	654 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	CLB1	P24868	471 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	NGG1	P32494	702 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	MSS1	P32559	526 aa	Predicted RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	LOS1	P33418	1100 aa	Predicted RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	CTF13	P35203	478 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	RPC37	P36121	282 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	PCA1	P38360	1216 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	YHR054C	P38780	354 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	MSS4	P38994	779 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	CCT2	P39076	527 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	TMA108	P40462	946 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	URM1	P40554	99 aa	Predicted RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	SAE2	P46946	345 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	URB2	P47108	1174 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	SRB7	P47822	140 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	LSC1	P53598	329 aa	Known RBP	2.77	□□□□□ -1.97
NAB3	YPL190C	UFO1	Q04511	668 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	IVY1	Q04934	453 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	THI7	Q05998	598 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	PIG1	Q06216	648 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	MCH5	Q08777	521 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	TAF10	Q12030	206 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	UPC2	Q12151	913 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	AVL9	Q12500	764 aa		2.77	□□□□□ -1.97
NAB3	YPL190C	URA3	P03962	267 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	HIS5	P07172	385 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	ILV2	P07342	687 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	CBF1	P17106	351 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	RRT12	P25381	491 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	TRM2	P33753	639 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	SEG2	P34250	1132 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	KDX1	P36005	433 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	VID24	P38263	362 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	YBR225W	P38321	900 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	SWC5	P38326	303 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	VHC1	P38329	1120 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	YHR112C	P38716	378 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	MEF2	P39677	819 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	SAP1	P39955	897 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	TMN3	P40071	706 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	PFA3	P42836	336 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	MET12	P46151	657 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	POL31	P46957	487 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	RNR4	P49723	345 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	PSP1	P50896	841 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	MND1	P53102	219 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	BLS1	Q06071	122 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	YPL272C	Q08984	517 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	YDR018C	Q12185	396 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	LAS17	Q12446	633 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	FKS1	P38631	1876 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	WHI2	P12611	486 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	YPK1	P12688	680 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	SNA3	P14359	133 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	PRP16	P15938	1071 aa	Predicted RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	GLN3	P18494	730 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	TRX1	P22217	103 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	CAD1	P24813	409 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	GFD2	P25370	566 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	RAD16	P31244	790 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	LRG1	P35688	1017 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	POP4	P38336	279 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	KSP1	P38691	1029 aa	Known RBP	2.76	□□□□□ -1.97
NAB3	YPL190C	TDA10	P42938	290 aa		2.76	□□□□□ -1.97
NAB3	YPL190C	ECL1	P48235	211 aa		2.76	□□□□□ -1.97

Retrieved 100 of 5,963 RNA–protein pairs in 80.1 ms