RNA–Protein interactions for RNA: YPL177C

CUP9, Transcript of Homeodomain-containing transcriptional repressor, yeastyeast

Gene CUP9, Length 921 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CUP9YPL177C UTP21Q06078 939 aaPredicted RBP3.71□□□□□ -1.82
CUP9YPL177C MCP2Q06567 569 aa3.71□□□□□ -1.82
CUP9YPL177C UBX3Q12229 455 aa3.71□□□□□ -1.82
CUP9YPL177C KRS1P15180 591 aaKnown RBP3.7□□□□□ -1.82
CUP9YPL177C YCR043CP25361 127 aa3.7□□□□□ -1.82
CUP9YPL177C STV1P37296 890 aa3.7□□□□□ -1.82
CUP9YPL177C DIA4P38705 446 aaPredicted RBP3.7□□□□□ -1.82
CUP9YPL177C YNG2P38806 282 aaKnown RBP3.7□□□□□ -1.82
CUP9YPL177C UIP3P39547 235 aa3.7□□□□□ -1.82
CUP9YPL177C YIL060WP40519 144 aa3.7□□□□□ -1.82
CUP9YPL177C SMC3P47037 1230 aa3.7□□□□□ -1.82
CUP9YPL177C UPF3P48412 387 aaKnown RBP3.7□□□□□ -1.82
CUP9YPL177C BOP3P53958 396 aa3.7□□□□□ -1.82
CUP9YPL177C ARP10Q04549 284 aa3.7□□□□□ -1.82
CUP9YPL177C ARP9Q05123 467 aa3.7□□□□□ -1.82
CUP9YPL177C YMR034CQ05131 434 aaPredicted RBP3.7□□□□□ -1.82
CUP9YPL177C APL4Q12028 832 aa3.7□□□□□ -1.82
CUP9YPL177C YBR126W-AQ8TGU7 68 aa3.7□□□□□ -1.82
CUP9YPL177C EDE1P34216 1381 aa3.7□□□□□ -1.82
CUP9YPL177C PHO2P07269 559 aa3.69□□□□□ -1.82
CUP9YPL177C RPB8P20436 146 aa3.69□□□□□ -1.82
CUP9YPL177C VMA16P23968 213 aa3.69□□□□□ -1.82
CUP9YPL177C PGS1P25578 521 aa3.69□□□□□ -1.82
CUP9YPL177C POL4P25615 582 aa3.69□□□□□ -1.82
CUP9YPL177C YKL050CP35736 922 aa3.69□□□□□ -1.82
CUP9YPL177C AUR1P36107 401 aaPredicted RBP3.69□□□□□ -1.82
CUP9YPL177C YBL029WP38201 376 aa3.69□□□□□ -1.82
CUP9YPL177C ARP1P38696 384 aa3.69□□□□□ -1.82
CUP9YPL177C TMA108P40462 946 aa3.69□□□□□ -1.82
CUP9YPL177C DIA3P52290 468 aa3.69□□□□□ -1.82
CUP9YPL177C YNL234WP53857 426 aa3.69□□□□□ -1.82
CUP9YPL177C ESBP6P53918 673 aa3.69□□□□□ -1.82
CUP9YPL177C NGL3Q03210 505 aa3.69□□□□□ -1.82
CUP9YPL177C SCW10Q04951 389 aa3.69□□□□□ -1.82
CUP9YPL177C ADE13Q05911 482 aaKnown RBP3.69□□□□□ -1.82
CUP9YPL177C YDL218WQ07629 317 aa3.69□□□□□ -1.82
CUP9YPL177C DSE3Q08729 430 aa3.69□□□□□ -1.82
CUP9YPL177C HUA2Q12134 243 aa3.69□□□□□ -1.82
CUP9YPL177C YFL068WP0CX99 160 aa3.68□□□□□ -1.82
CUP9YPL177C YLL066W-AP0CY00 160 aa3.68□□□□□ -1.82
CUP9YPL177C YLL067W-AP0CY01 160 aa3.68□□□□□ -1.82
CUP9YPL177C SPE2P21182 396 aa3.68□□□□□ -1.82
CUP9YPL177C SWE1P32944 819 aa3.68□□□□□ -1.82
CUP9YPL177C MIA40P36046 403 aa3.68□□□□□ -1.82
CUP9YPL177C ELO1P39540 310 aa3.68□□□□□ -1.82
CUP9YPL177C NOP16P40007 231 aaKnown RBP3.68□□□□□ -1.82
CUP9YPL177C TES1P41903 349 aaKnown RBP3.68□□□□□ -1.82
CUP9YPL177C ZDS2P54786 942 aa3.68□□□□□ -1.82
CUP9YPL177C DIG1Q03063 452 aaKnown RBP3.68□□□□□ -1.82
CUP9YPL177C YML037CQ03703 340 aa3.68□□□□□ -1.82
CUP9YPL177C TMA64Q04600 565 aaKnown RBP3.68□□□□□ -1.82
CUP9YPL177C ATG26Q06321 1198 aa3.68□□□□□ -1.82
CUP9YPL177C MLH2Q07980 695 aa3.68□□□□□ -1.82
CUP9YPL177C RPS10AQ08745 105 aaPredicted RBP3.68□□□□□ -1.82
CUP9YPL177C SPE4Q12455 300 aa3.68□□□□□ -1.82
CUP9YPL177C ARD1P07347 238 aaPredicted RBP3.67□□□□□ -1.82
CUP9YPL177C KGD1P20967 1014 aaKnown RBP3.67□□□□□ -1.82
CUP9YPL177C PDR3P33200 976 aa3.67□□□□□ -1.82
CUP9YPL177C AGP2P38090 596 aa3.67□□□□□ -1.82
CUP9YPL177C ARC40P38328 384 aaKnown RBP3.67□□□□□ -1.82
CUP9YPL177C RPS10BP46784 105 aaKnown RBP3.67□□□□□ -1.82
CUP9YPL177C PKP2P53170 491 aa3.67□□□□□ -1.82
CUP9YPL177C EKI1Q03764 534 aa3.67□□□□□ -1.82
CUP9YPL177C EMI2Q04409 500 aaKnown RBP3.67□□□□□ -1.82
CUP9YPL177C DPB4Q04603 196 aaKnown RBP3.67□□□□□ -1.82
CUP9YPL177C ECI1Q05871 280 aa3.67□□□□□ -1.82
CUP9YPL177C GRS2Q06817 618 aa3.67□□□□□ -1.82
CUP9YPL177C RTT109Q07794 436 aa3.67□□□□□ -1.82
CUP9YPL177C GRC3Q07845 632 aa3.67□□□□□ -1.82
CUP9YPL177C SEM1O94742 89 aa3.66□□□□□ -1.82
CUP9YPL177C ADH7P25377 361 aa3.66□□□□□ -1.82
CUP9YPL177C GAC1P28006 793 aa3.66□□□□□ -1.82
CUP9YPL177C SYN8P31377 255 aa3.66□□□□□ -1.82
CUP9YPL177C TSC10P38342 320 aa3.66□□□□□ -1.82
CUP9YPL177C PCL6P40038 420 aa3.66□□□□□ -1.82
CUP9YPL177C SGM1P47166 707 aa3.66□□□□□ -1.82
CUP9YPL177C DSD1P53095 428 aa3.66□□□□□ -1.82
CUP9YPL177C SUB1P54000 292 aaKnown RBP3.66□□□□□ -1.82
CUP9YPL177C CTL1Q03220 320 aaKnown RBP3.66□□□□□ -1.82
CUP9YPL177C TEN1Q07921 160 aa3.66□□□□□ -1.82
CUP9YPL177C NRT1Q08485 598 aa3.66□□□□□ -1.82
CUP9YPL177C YPL272CQ08984 517 aa3.66□□□□□ -1.82
CUP9YPL177C LEU9Q12166 604 aaKnown RBP3.66□□□□□ -1.82
CUP9YPL177C SNF3P10870 884 aa3.65□□□□□ -1.83
CUP9YPL177C MGR1P25573 417 aa3.65□□□□□ -1.83
CUP9YPL177C DBP8P38719 431 aa3.65□□□□□ -1.83
CUP9YPL177C AFG3P39925 761 aa3.65□□□□□ -1.83
CUP9YPL177C BET4Q00618 327 aa3.65□□□□□ -1.83
CUP9YPL177C SMA1Q02651 245 aa3.65□□□□□ -1.83
CUP9YPL177C BUD22Q04347 519 aaKnown RBP3.65□□□□□ -1.83
CUP9YPL177C ECM30Q06673 1274 aa3.65□□□□□ -1.83
CUP9YPL177C RDR1Q08904 546 aa3.65□□□□□ -1.83
CUP9YPL177C SEC53P07283 254 aaKnown RBP3.64□□□□□ -1.83
CUP9YPL177C YIH1P25637 258 aa3.64□□□□□ -1.83
CUP9YPL177C CMK1P27466 446 aaKnown RBP3.64□□□□□ -1.83
CUP9YPL177C SAC6P32599 642 aaKnown RBP3.64□□□□□ -1.83
CUP9YPL177C UBP11P36026 717 aa3.64□□□□□ -1.83
CUP9YPL177C YPK3P38070 525 aa3.64□□□□□ -1.83
CUP9YPL177C MET30P39014 640 aa3.64□□□□□ -1.83
CUP9YPL177C PHO90P39535 881 aa3.64□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 13.4 ms