RNA–Protein interactions for RNA: YPL147W

PXA1, Transcript of Subunit of a heterodimeric peroxisomal ABC transport complex, yeast

Gene PXA1, Length 2,613 nt, Biotype protein coding, Subcellular localisation Mitochondria, Peroxisome .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PXA1	YPL147W	MDM12	Q92328	271 aa		4.9	□□□□□ -1.63
PXA1	YPL147W	YOS9	Q99220	542 aa		4.9	□□□□□ -1.63
PXA1	YPL147W	HIS4	P00815	799 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	FBA1	P14540	359 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	PDC5	P16467	563 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	TEC1	P18412	486 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	VMA16	P23968	213 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	CRM1	P30822	1084 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	IRE1	P32361	1115 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	NCL1	P38205	684 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	BIT2	P38346	545 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	TDA3	P38758	523 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	YHR045W	P38775	560 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	TIF11	P38912	153 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	RRT14	P40470	206 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	HPM1	P40481	377 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	YIL001W	P40560	513 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	TDA10	P42938	290 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	PSP1	P50896	841 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	DRN1	P53255	507 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	ORC4	P54791	529 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	COX20	Q04935	205 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	YCS4	Q06156	1176 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	REX4	Q08237	289 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	SRO7	Q12038	1033 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	TGL5	Q12043	749 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	SPE3	Q12074	293 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	HAL9	Q12180	1030 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	MSL5	Q12186	476 aa	Known RBP RIP-Chip data	4.89	□□□□□ -1.63	not detected
PXA1	YPL147W	GPR1	Q12361	961 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	CMR1	Q12510	522 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	COB	P00163	385 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	NUC1	P08466	329 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	RPL27A	P0C2H6	136 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	RPL27B	P0C2H7	136 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	VBA3	P25594	458 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	IMG2	P25642	146 aa	Predicted RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	PRE4	P30657	266 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	MNS1	P32906	549 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	VAM7	P32912	316 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	AST1	P35183	429 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	FIG1	P38224	298 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	GDT1	P38301	280 aa	Predicted RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	BZZ1	P38822	633 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	AXL2	P38928	823 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	LRO1	P40345	661 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	ELP2	P42935	788 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	OTU1	P43558	301 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	YFH7	P43591	353 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	YJR096W	P47137	282 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	YGR053C	P53234	283 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	PRM1	P53835	661 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	PEX29	Q03370	554 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	YMR114C	Q04471	368 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	VID22	Q05934	901 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	DUS3	Q06053	668 aa	Known RBP	4.89	□□□□□ -1.63
PXA1	YPL147W	GPM3	Q12326	303 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	PNS1	Q12412	539 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	ARP6	Q12509	438 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	SEY1	Q99287	776 aa		4.89	□□□□□ -1.63
PXA1	YPL147W	IPP1	P00817	287 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	LEU2	P04173	364 aa	Predicted RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	SBP1	P10080	294 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	CBS1	P14066	229 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	SNF6	P18888	332 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	APA2	P22108	325 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	RVS161	P25343	265 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	CAM1	P29547	415 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	CYM1	P32898	989 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	HMT1	P38074	348 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	MRX3	P38172	270 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	PCM1	P38628	557 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	MGS1	P40151	587 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	RFC4	P40339	323 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	AIM24	P47127	394 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	RSM26	P47141	266 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	YGL159W	P53110	370 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	TEP1	P53916	434 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	YSA1	Q01976	231 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	MRPL13	Q02204	264 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	YVH1	Q02256	364 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	REC102	Q02721	264 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	IRC4	Q03036	179 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	NGL2	Q03264	515 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	YMD8	Q03697	442 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	YDR306C	Q06640	478 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	YDL144C	Q07589	356 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	MET7	Q08645	548 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	LYS21	Q12122	440 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	HMS1	Q12398	434 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	RPL6B	P05739	176 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	RAD57	P25301	460 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	YCR101C	P25607	182 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	MCM5	P29496	775 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	SEC1	P30619	724 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	ADH5	P38113	351 aa	Known RBP	4.88	□□□□□ -1.63
PXA1	YPL147W	RPH1	P39956	796 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	STB1	P42845	420 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	GLG2	P47011	380 aa		4.88	□□□□□ -1.63
PXA1	YPL147W	BNA3	P47039	444 aa	Known RBP	4.88	□□□□□ -1.63

Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms