RNA–Protein interactions for RNA: YOR098C

NUP1, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeast

Gene NUP1, Length 3,231 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
NUP1	YOR098C	MRPL1	Q04599	285 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	TY3A-G	Q12173	290 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	TY3A-I	Q99219	290 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	MRP4	P32902	394 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	CMC1	P36064	111 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	YHL017W	P38745	532 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	YER034W	P40022	185 aa	Known RBP	5.5	□□□□□ -1.53
NUP1	YOR098C	COX18	P53239	316 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	LSC1	P53598	329 aa	Known RBP	5.5	□□□□□ -1.53
NUP1	YOR098C	CUZ1	P53899	274 aa		5.5	□□□□□ -1.53
NUP1	YOR098C	ADE12	P80210	433 aa	Known RBP	5.5	□□□□□ -1.53
NUP1	YOR098C	HMO1	Q03973	246 aa	Known RBP	5.5	□□□□□ -1.53
NUP1	YOR098C	RIB2	Q12362	591 aa	Known RBP	5.5	□□□□□ -1.53
NUP1	YOR098C	BNR1	P40450	1375 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	ERG20	P08524	352 aa	Known RBP	5.49	□□□□□ -1.53
NUP1	YOR098C	RPL3	P14126	387 aa	Known RBP	5.49	□□□□□ -1.53
NUP1	YOR098C	RPT5	P33297	434 aa	Known RBP	5.49	□□□□□ -1.53
NUP1	YOR098C	YHL012W	P38709	493 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	LYS5	P50113	272 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	YGR012W	P53206	393 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	RCM1	P53972	490 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	AIR2	Q12476	344 aa	Known RBP	5.49	□□□□□ -1.53
NUP1	YOR098C	GCD1	P09032	578 aa	Predicted RBP	5.49	□□□□□ -1.53
NUP1	YOR098C	SLM4	P38247	162 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	CTK2	P46962	323 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	AQR1	P53943	586 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	PPM1	Q04081	328 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	VPS20	Q04272	221 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	PCL8	Q08966	492 aa		5.49	□□□□□ -1.53
NUP1	YOR098C	YML133C	Q03099	1374 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	YLL067C	Q07888	1374 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	YLL066C	Q99208	1374 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	RPS4A	P0CX35	261 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	RPS4B	P0CX36	261 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	YJU2	P28320	278 aa	Predicted RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	AFG1	P32317	509 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	TAT1	P38085	619 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	CIN4	P39110	191 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	SER3	P40054	469 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	SDP1	P40479	209 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	SEC24	P40482	926 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	ECM3	Q99252	613 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	RPL6B	P05739	176 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	HXT3	P32466	567 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	PZF1	P39933	429 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	GTS1	P40956	396 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	TWF1	P53250	332 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	DCP2	P53550	970 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	RPL6A	Q02326	176 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	EGD1	Q02642	157 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	AVL9	Q12500	764 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	YDR461C-A	Q2V2P7	80 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	TFB5	Q3E7C1	72 aa	Predicted RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	TAL1	P15019	335 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	VPS33	P20795	691 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	URK1	P27515	501 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	ARC19	P33204	171 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	YKT6	P36015	200 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	MED8	P38304	223 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	NUP60	P39705	539 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	APT1	P49435	187 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	CTR1	P49573	406 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	INP52	P50942	1183 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	COS12	P53053	380 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	CLU1	Q03690	1277 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	NKP2	Q06162	153 aa		5.48	□□□□□ -1.53
NUP1	YOR098C	SMD2	Q06217	110 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	HBT1	Q07653	1046 aa	Known RBP	5.48	□□□□□ -1.53
NUP1	YOR098C	RPS9B	P05755	195 aa	Known RBP	5.47	□□□□□ -1.53
NUP1	YOR098C	ARD1	P07347	238 aa	Predicted RBP	5.47	□□□□□ -1.53
NUP1	YOR098C	SPS22	P25380	463 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	PEX32	P38292	413 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	YHR112C	P38716	378 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	ECM1	P39715	212 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	YNL143C	P53908	130 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	REC102	Q02721	264 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	AIM41	Q12032	185 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	WBP1	P33767	430 aa	Known RBP	5.47	□□□□□ -1.53
NUP1	YOR098C	HXT14	P42833	540 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	ELP2	P42935	788 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	INP2	Q03824	705 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	ADF1	Q2V2Q1	113 aa		5.47	□□□□□ -1.53
NUP1	YOR098C	PRP4	P20053	465 aa	Known RBP	5.46	□□□□□ -1.53
NUP1	YOR098C	YIH1	P25637	258 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	YME2	P32843	850 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	TCD1	P38756	429 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	BDH2	P39713	417 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	ELO3	P40319	345 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	DSN1	P40568	576 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	PAN2	P53010	1115 aa	Predicted RBP	5.46	□□□□□ -1.53
NUP1	YOR098C	SMA1	Q02651	245 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	MCM21	Q06675	368 aa		5.46	□□□□□ -1.53
NUP1	YOR098C	MRPL23	Q12487	163 aa	Predicted RBP	5.46	□□□□□ -1.53
NUP1	YOR098C	GPM1	P00950	247 aa	Known RBP	5.46	□□□□□ -1.54
NUP1	YOR098C	HMX1	P32339	317 aa		5.46	□□□□□ -1.54
NUP1	YOR098C	RML2	P32611	393 aa		5.46	□□□□□ -1.54
NUP1	YOR098C	SFA1	P32771	386 aa		5.46	□□□□□ -1.54
NUP1	YOR098C	YBL028C	P38202	106 aa		5.46	□□□□□ -1.54
NUP1	YOR098C	YTA12	P40341	825 aa		5.46	□□□□□ -1.54
NUP1	YOR098C	FMS1	P50264	508 aa		5.46	□□□□□ -1.54

Retrieved 100 of 5,963 RNA–protein pairs in 35.4 ms