RNA–Protein interactions for RNA: YOR009W

TIR4, Transcript of Cell wall mannoprotein, yeast

Gene TIR4, Length 1,464 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TIR4	YOR009W	YJR154W	P47181	346 aa		12.02	□□□□□ -0.49
TIR4	YOR009W	IBD2	P53892	351 aa		12.02	□□□□□ -0.49
TIR4	YOR009W	SLM2	P53955	656 aa		12.02	□□□□□ -0.49
TIR4	YOR009W	YMR178W	Q03219	274 aa	Known RBP	12.02	□□□□□ -0.49
TIR4	YOR009W	RPC11	Q04307	110 aa	Predicted RBP	12.02	□□□□□ -0.49
TIR4	YOR009W	CIA1	Q05583	330 aa		12.02	□□□□□ -0.49
TIR4	YOR009W	FAR10	Q06001	478 aa		12.02	□□□□□ -0.49
TIR4	YOR009W	RIF2	Q06208	395 aa		12.02	□□□□□ -0.49
TIR4	YOR009W	DIA2	Q08496	732 aa	Predicted RBP	12.02	□□□□□ -0.49
TIR4	YOR009W	SPS19	P32573	292 aa	Known RBP	12.01	□□□□□ -0.49
TIR4	YOR009W	PRP18	P33411	251 aa	Predicted RBP	12.01	□□□□□ -0.49
TIR4	YOR009W	PTH2	P34222	208 aa		12.01	□□□□□ -0.49
TIR4	YOR009W	PCL5	P38794	229 aa		12.01	□□□□□ -0.49
TIR4	YOR009W	MPT5	P39016	859 aa	Known RBP RIP-Chip data	12.01	□□□□□ -0.49	not detected
TIR4	YOR009W	COG7	P53195	279 aa		12.01	□□□□□ -0.49
TIR4	YOR009W	GAS3	Q03655	524 aa		12.01	□□□□□ -0.49
TIR4	YOR009W	GLO2	Q05584	274 aa		12.01	□□□□□ -0.49
TIR4	YOR009W	SMF3	Q12078	473 aa	Predicted RBP	12.01	□□□□□ -0.49
TIR4	YOR009W	FAB1	P34756	2278 aa		12	□□□□□ -0.49
TIR4	YOR009W	HEM2	P05373	342 aa		12	□□□□□ -0.49
TIR4	YOR009W	RNA1	P11745	407 aa	Known RBP	12	□□□□□ -0.49
TIR4	YOR009W	APA1	P16550	321 aa	Known RBP	12	□□□□□ -0.49
TIR4	YOR009W	PRP6	P19735	899 aa	Predicted RBP	12	□□□□□ -0.49
TIR4	YOR009W	VAN1	P23642	535 aa		12	□□□□□ -0.49
TIR4	YOR009W	SPR1	P32603	445 aa		12	□□□□□ -0.49
TIR4	YOR009W	PMT1	P33775	817 aa		12	□□□□□ -0.49
TIR4	YOR009W	YHL008C	P38750	627 aa		12	□□□□□ -0.49
TIR4	YOR009W	OSW5	P40219	148 aa		12	□□□□□ -0.49
TIR4	YOR009W	GAT1	P43574	510 aa		12	□□□□□ -0.49
TIR4	YOR009W	FAP1	P53971	965 aa		12	□□□□□ -0.49
TIR4	YOR009W	YET2	Q04210	160 aa		12	□□□□□ -0.49
TIR4	YOR009W	SSL1	Q04673	461 aa	Predicted RBP	12	□□□□□ -0.49
TIR4	YOR009W	GTB1	Q04924	702 aa		12	□□□□□ -0.49
TIR4	YOR009W	VAM6	Q07468	1049 aa		12	□□□□□ -0.49
TIR4	YOR009W	BUD7	Q08754	746 aa		12	□□□□□ -0.49
TIR4	YOR009W	TGL5	Q12043	749 aa		12	□□□□□ -0.49
TIR4	YOR009W	MPD2	Q99316	277 aa		12	□□□□□ -0.49
TIR4	YOR009W	PHO5	P00635	467 aa		11.99	□□□□□ -0.49
TIR4	YOR009W	TIP20	P33891	701 aa		11.99	□□□□□ -0.49
TIR4	YOR009W	DCW1	P36091	449 aa		11.99	□□□□□ -0.49
TIR4	YOR009W	DBP8	P38719	431 aa		11.99	□□□□□ -0.49
TIR4	YOR009W	YRB1	P41920	201 aa	Known RBP	11.99	□□□□□ -0.49
TIR4	YOR009W	SWC4	P53201	476 aa		11.99	□□□□□ -0.49
TIR4	YOR009W	CUS2	P53830	285 aa	Predicted RBP	11.99	□□□□□ -0.49
TIR4	YOR009W	LGE1	Q02796	332 aa	Known RBP	11.99	□□□□□ -0.49
TIR4	YOR009W	VTA1	Q06263	330 aa		11.99	□□□□□ -0.49
TIR4	YOR009W	CAR1	P00812	333 aa	Known RBP	11.98	□□□□□ -0.49
TIR4	YOR009W	PWP1	P21304	576 aa	Known RBP	11.98	□□□□□ -0.49
TIR4	YOR009W	SSE1	P32589	693 aa	Known RBP	11.98	□□□□□ -0.49
TIR4	YOR009W	TSC10	P38342	320 aa		11.98	□□□□□ -0.49
TIR4	YOR009W	YHR045W	P38775	560 aa		11.98	□□□□□ -0.49
TIR4	YOR009W	DHH1	P39517	506 aa	Known RBP	11.98	□□□□□ -0.49
TIR4	YOR009W	FRT2	P39734	528 aa		11.98	□□□□□ -0.49
TIR4	YOR009W	NPY1	P53164	384 aa		11.98	□□□□□ -0.49
TIR4	YOR009W	EFM5	P53200	248 aa	Known RBP	11.98	□□□□□ -0.49
TIR4	YOR009W	NMA2	P53204	395 aa		11.98	□□□□□ -0.49
TIR4	YOR009W	NPL3	Q01560	414 aa	Known RBP RIP-Chip data	11.98	□□□□□ -0.49	not detected
TIR4	YOR009W	ESA1	Q08649	445 aa		11.98	□□□□□ -0.49
TIR4	YOR009W	PTC1	P35182	281 aa		11.97	□□□□□ -0.49
TIR4	YOR009W	CUE2	P36075	443 aa	Known RBP	11.97	□□□□□ -0.49
TIR4	YOR009W	ATH1	P48016	1211 aa		11.97	□□□□□ -0.49
TIR4	YOR009W	YNR061C	P53747	219 aa		11.97	□□□□□ -0.49
TIR4	YOR009W	REX2	P54964	269 aa	Known RBP	11.97	□□□□□ -0.49
TIR4	YOR009W	YML131W	Q03102	365 aa		11.97	□□□□□ -0.49
TIR4	YOR009W	RAD59	Q12223	238 aa		11.97	□□□□□ -0.49
TIR4	YOR009W	GUK1	P15454	187 aa	Known RBP	11.96	□□□□□ -0.49
TIR4	YOR009W	UTP9	P38882	575 aa	Known RBP	11.96	□□□□□ -0.49
TIR4	YOR009W	ECM1	P39715	212 aa		11.96	□□□□□ -0.49
TIR4	YOR009W	MTO1	P53070	669 aa		11.96	□□□□□ -0.49
TIR4	YOR009W	YNL010W	P53981	241 aa	Known RBP	11.96	□□□□□ -0.49
TIR4	YOR009W	JIP5	Q06214	492 aa	Predicted RBP	11.96	□□□□□ -0.49
TIR4	YOR009W	HBT1	Q07653	1046 aa	Known RBP	11.96	□□□□□ -0.49
TIR4	YOR009W	NSE1	Q07913	336 aa		11.96	□□□□□ -0.49
TIR4	YOR009W	YEH2	Q07950	538 aa		11.96	□□□□□ -0.49
TIR4	YOR009W	YPR202W	Q08993	238 aa		11.96	□□□□□ -0.49
TIR4	YOR009W	EPT1	P22140	391 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	DGR2	P32330	852 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	STB2	P46679	850 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	SHY1	P53266	389 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	GTR2	P53290	341 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	NOP19	P53317	196 aa	Predicted RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	RSC3	Q06639	885 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	GPB1	Q08886	897 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	GNT1	Q12096	491 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	GTT2	Q12390	233 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	AHA1	Q12449	350 aa	Known RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	RRP36	Q12481	300 aa	Predicted RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	TRP3	P00937	484 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	FUS1	P11710	512 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	BUB2	P26448	306 aa	Predicted RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	IML3	P38265	245 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	FZO1	P38297	855 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	YHR020W	P38708	688 aa	Known RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	HSE1	P38753	452 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	SCS2	P40075	244 aa	Known RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	TDA7	P53882	636 aa	Predicted RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	HEL2	Q05580	639 aa	Known RBP	11.95	□□□□□ -0.5
TIR4	YOR009W	YLR049C	Q12110	428 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	YOR012W	Q12351	137 aa		11.95	□□□□□ -0.5
TIR4	YOR009W	SUC2	P00724	532 aa		11.94	□□□□□ -0.5

Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms