RNA–Protein interactions for RNA: YOL005C

RPB11, Transcript of RNA polymerase II subunit B12.5, yeastyeast

Gene RPB11, Length 363 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RPB11YOL005C DPB4Q04603 196 aaKnown RBP2.62□□□□□ -1.99
RPB11YOL005C ECI1Q05871 280 aa2.62□□□□□ -1.99
RPB11YOL005C ECM30Q06673 1274 aa2.62□□□□□ -1.99
RPB11YOL005C YDL121CQ07541 149 aa2.62□□□□□ -1.99
RPB11YOL005C MLH2Q07980 695 aa2.62□□□□□ -1.99
RPB11YOL005C RDR1Q08904 546 aa2.62□□□□□ -1.99
RPB11YOL005C TOP1P04786 769 aa2.61□□□□□ -1.99
RPB11YOL005C AAC3P18238 307 aa2.61□□□□□ -1.99
RPB11YOL005C PDB1P32473 366 aaKnown RBP2.61□□□□□ -1.99
RPB11YOL005C UBP11P36026 717 aa2.61□□□□□ -1.99
RPB11YOL005C AUR1P36107 401 aaPredicted RBP2.61□□□□□ -1.99
RPB11YOL005C ARC40P38328 384 aaKnown RBP2.61□□□□□ -1.99
RPB11YOL005C UIP3P39547 235 aa2.61□□□□□ -1.99
RPB11YOL005C YIL169CP40442 995 aa2.61□□□□□ -1.99
RPB11YOL005C HXT9P40885 567 aa2.61□□□□□ -1.99
RPB11YOL005C IRC8P47046 822 aa2.61□□□□□ -1.99
RPB11YOL005C YNL181WP53878 407 aa2.61□□□□□ -1.99
RPB11YOL005C SVL3Q03088 825 aaKnown RBP2.61□□□□□ -1.99
RPB11YOL005C EKI1Q03764 534 aa2.61□□□□□ -1.99
RPB11YOL005C GRC3Q07845 632 aa2.61□□□□□ -1.99
RPB11YOL005C TEN1Q07921 160 aa2.61□□□□□ -1.99
RPB11YOL005C BUD7Q08754 746 aa2.61□□□□□ -1.99
RPB11YOL005C LEU9Q12166 604 aaKnown RBP2.61□□□□□ -1.99
RPB11YOL005C ARG81P05085 880 aa2.6□□□□□ -1.99
RPB11YOL005C SNF3P10870 884 aa2.6□□□□□ -1.99
RPB11YOL005C PWP1P21304 576 aaKnown RBP2.6□□□□□ -1.99
RPB11YOL005C YCR043CP25361 127 aa2.6□□□□□ -1.99
RPB11YOL005C ADH7P25377 361 aa2.6□□□□□ -1.99
RPB11YOL005C MGR1P25573 417 aa2.6□□□□□ -1.99
RPB11YOL005C PGS1P25578 521 aa2.6□□□□□ -1.99
RPB11YOL005C PEP3P27801 918 aa2.6□□□□□ -1.99
RPB11YOL005C PAH1P32567 862 aa2.6□□□□□ -1.99
RPB11YOL005C MIA40P36046 403 aa2.6□□□□□ -1.99
RPB11YOL005C SNU114P36048 1008 aaKnown RBP2.6□□□□□ -1.99
RPB11YOL005C ROT2P38138 954 aa2.6□□□□□ -1.99
RPB11YOL005C ICS2P38284 255 aa2.6□□□□□ -1.99
RPB11YOL005C MET30P39014 640 aa2.6□□□□□ -1.99
RPB11YOL005C ELO1P39540 310 aa2.6□□□□□ -1.99
RPB11YOL005C RPN11P43588 306 aaKnown RBP2.6□□□□□ -1.99
RPB11YOL005C SUB1P54000 292 aaKnown RBP2.6□□□□□ -1.99
RPB11YOL005C MAK10Q02197 733 aa2.6□□□□□ -1.99
RPB11YOL005C YVH1Q02256 364 aaKnown RBP2.6□□□□□ -1.99
RPB11YOL005C YPL068CQ02749 293 aa2.6□□□□□ -1.99
RPB11YOL005C INA17Q02888 182 aa2.6□□□□□ -1.99
RPB11YOL005C ARP9Q05123 467 aa2.6□□□□□ -1.99
RPB11YOL005C ATG26Q06321 1198 aa2.6□□□□□ -1.99
RPB11YOL005C NKP1Q12493 238 aa2.6□□□□□ -1.99
RPB11YOL005C SEC53P07283 254 aaKnown RBP2.59□□□□□ -1.99
RPB11YOL005C ARD1P07347 238 aaPredicted RBP2.59□□□□□ -1.99
RPB11YOL005C EST1P17214 699 aaPredicted RBP2.59□□□□□ -1.99
RPB11YOL005C YIH1P25637 258 aa2.59□□□□□ -1.99
RPB11YOL005C CMK1P27466 446 aaKnown RBP2.59□□□□□ -1.99
RPB11YOL005C MCM4P30665 933 aaKnown RBP2.59□□□□□ -1.99
RPB11YOL005C TRS65P32893 560 aa2.59□□□□□ -1.99
RPB11YOL005C YNG2P38806 282 aaKnown RBP2.59□□□□□ -1.99
RPB11YOL005C PCL6P40038 420 aa2.59□□□□□ -1.99
RPB11YOL005C YIL152WP40455 235 aa2.59□□□□□ -1.99
RPB11YOL005C MAF1P41910 395 aa2.59□□□□□ -1.99
RPB11YOL005C DSD1P53095 428 aa2.59□□□□□ -1.99
RPB11YOL005C LSC1P53598 329 aaKnown RBP2.59□□□□□ -1.99
RPB11YOL005C DUG3P53871 357 aa2.59□□□□□ -1.99
RPB11YOL005C BET4Q00618 327 aa2.59□□□□□ -1.99
RPB11YOL005C RSM23Q01163 450 aa2.59□□□□□ -1.99
RPB11YOL005C SMA1Q02651 245 aa2.59□□□□□ -1.99
RPB11YOL005C NGL3Q03210 505 aa2.59□□□□□ -1.99
RPB11YOL005C CIR2Q08822 631 aa2.59□□□□□ -1.99
RPB11YOL005C YPT1P01123 206 aaKnown RBP2.58□□□□□ -2
RPB11YOL005C RPL19AP0CX82 189 aaKnown RBP2.58□□□□□ -2
RPB11YOL005C RPL19BP0CX83 189 aaPredicted RBP2.58□□□□□ -2
RPB11YOL005C KGD1P20967 1014 aaKnown RBP2.58□□□□□ -2
RPB11YOL005C IMG1P25626 169 aa2.58□□□□□ -2
RPB11YOL005C YPK3P38070 525 aa2.58□□□□□ -2
RPB11YOL005C TSC10P38342 320 aa2.58□□□□□ -2
RPB11YOL005C LEU5P38702 357 aa2.58□□□□□ -2
RPB11YOL005C RTS2P40962 232 aa2.58□□□□□ -2
RPB11YOL005C IAH1P41734 238 aa2.58□□□□□ -2
RPB11YOL005C TES1P41903 349 aaKnown RBP2.58□□□□□ -2
RPB11YOL005C SGM1P47166 707 aa2.58□□□□□ -2
RPB11YOL005C PKP2P53170 491 aa2.58□□□□□ -2
RPB11YOL005C YGR127WP53275 312 aa2.58□□□□□ -2
RPB11YOL005C IPI3P53877 555 aa2.58□□□□□ -2
RPB11YOL005C FMP42Q04991 504 aa2.58□□□□□ -2
RPB11YOL005C ADE13Q05911 482 aaKnown RBP2.58□□□□□ -2
RPB11YOL005C SRL1Q08673 210 aa2.58□□□□□ -2
RPB11YOL005C NOP58Q12499 511 aaKnown RBP2.58□□□□□ -2
RPB11YOL005C MF(ALPHA)1P01149 165 aa2.57□□□□□ -2
RPB11YOL005C KAR3P17119 729 aa2.57□□□□□ -2
RPB11YOL005C REG2P38232 338 aa2.57□□□□□ -2
RPB11YOL005C ERG7P38604 731 aa2.57□□□□□ -2
RPB11YOL005C NOP16P40007 231 aaKnown RBP2.57□□□□□ -2
RPB11YOL005C AZF1P41696 914 aa2.57□□□□□ -2
RPB11YOL005C RPS10BP46784 105 aaKnown RBP2.57□□□□□ -2
RPB11YOL005C SCS3P53012 380 aa2.57□□□□□ -2
RPB11YOL005C ERG26P53199 349 aaKnown RBP2.57□□□□□ -2
RPB11YOL005C SOL4P53315 255 aa2.57□□□□□ -2
RPB11YOL005C NUP53Q03790 475 aa2.57□□□□□ -2
RPB11YOL005C TMA64Q04600 565 aaKnown RBP2.57□□□□□ -2
RPB11YOL005C YMR254CQ04838 102 aa2.57□□□□□ -2
RPB11YOL005C LUC7Q07508 261 aaPredicted RBP2.57□□□□□ -2
RPB11YOL005C RPS10AQ08745 105 aaPredicted RBP2.57□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 22.1 ms