RNA–Protein interactions for RNA: YMR067C

UBX4, Transcript of UBX domain-containing protein that interacts with Cdc48p, yeastyeast

Gene UBX4, Length 1,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBX4YMR067C YJL068CP40363 299 aa3.07□□□□□ -1.92
UBX4YMR067C RIC1P40395 1056 aa3.07□□□□□ -1.92
UBX4YMR067C PKP2P53170 491 aa3.07□□□□□ -1.92
UBX4YMR067C SOL4P53315 255 aa3.07□□□□□ -1.92
UBX4YMR067C ZDS2P54786 942 aa3.07□□□□□ -1.92
UBX4YMR067C HCR1Q05775 265 aaKnown RBP3.07□□□□□ -1.92
UBX4YMR067C YEH2Q07950 538 aa3.07□□□□□ -1.92
UBX4YMR067C PSK2Q08217 1101 aa3.07□□□□□ -1.92
UBX4YMR067C PFK2P16862 959 aaKnown RBP RIP-Chip data3.06□□□□□ -1.92not detected
UBX4YMR067C ERG8P24521 451 aa3.06□□□□□ -1.92
UBX4YMR067C MCM4P30665 933 aaKnown RBP3.06□□□□□ -1.92
UBX4YMR067C ARP1P38696 384 aa3.06□□□□□ -1.92
UBX4YMR067C DIA4P38705 446 aaPredicted RBP3.06□□□□□ -1.92
UBX4YMR067C UBA4P38820 440 aa3.06□□□□□ -1.92
UBX4YMR067C UME6P39001 836 aa3.06□□□□□ -1.92
UBX4YMR067C YTA12P40341 825 aa3.06□□□□□ -1.92
UBX4YMR067C YNR061CP53747 219 aa3.06□□□□□ -1.92
UBX4YMR067C REG1Q00816 1014 aa3.06□□□□□ -1.92
UBX4YMR067C INA17Q02888 182 aa3.06□□□□□ -1.92
UBX4YMR067C MUB1Q03162 620 aa3.06□□□□□ -1.92
UBX4YMR067C RCO1Q04779 684 aa3.06□□□□□ -1.92
UBX4YMR067C ADE13Q05911 482 aaKnown RBP3.06□□□□□ -1.92
UBX4YMR067C RDR1Q08904 546 aa3.06□□□□□ -1.92
UBX4YMR067C YOR019WQ99248 730 aa3.06□□□□□ -1.92
UBX4YMR067C YBR085C-AO43137 85 aa3.05□□□□□ -1.92
UBX4YMR067C RPB2P08518 1224 aaKnown RBP3.05□□□□□ -1.92
UBX4YMR067C APA1P16550 321 aaKnown RBP3.05□□□□□ -1.92
UBX4YMR067C TYR1P20049 452 aa3.05□□□□□ -1.92
UBX4YMR067C PGS1P25578 521 aa3.05□□□□□ -1.92
UBX4YMR067C CMK1P27466 446 aaKnown RBP3.05□□□□□ -1.92
UBX4YMR067C SNC1P31109 117 aa3.05□□□□□ -1.92
UBX4YMR067C CNS1P33313 385 aa3.05□□□□□ -1.92
UBX4YMR067C PTH2P34222 208 aa3.05□□□□□ -1.92
UBX4YMR067C YNG2P38806 282 aaKnown RBP3.05□□□□□ -1.92
UBX4YMR067C IME4P41833 600 aa3.05□□□□□ -1.92
UBX4YMR067C YGL082WP53155 381 aa3.05□□□□□ -1.92
UBX4YMR067C TLG2Q08144 397 aa3.05□□□□□ -1.92
UBX4YMR067C YLR302CO13544 120 aa3.04□□□□□ -1.92
UBX4YMR067C MRS3P10566 314 aa3.04□□□□□ -1.92
UBX4YMR067C LCB1P25045 558 aaKnown RBP3.04□□□□□ -1.92
UBX4YMR067C YHR218WP38899 603 aa3.04□□□□□ -1.92
UBX4YMR067C YER130CP39959 443 aa3.04□□□□□ -1.92
UBX4YMR067C SEC24P40482 926 aaKnown RBP3.04□□□□□ -1.92
UBX4YMR067C SAP185P40856 1058 aa3.04□□□□□ -1.92
UBX4YMR067C RPM2Q02773 1202 aa3.04□□□□□ -1.92
UBX4YMR067C MSS11Q03825 758 aa3.04□□□□□ -1.92
UBX4YMR067C ETT1Q08421 412 aaKnown RBP3.04□□□□□ -1.92
UBX4YMR067C RSA1Q08932 381 aa3.04□□□□□ -1.92
UBX4YMR067C PUT2P07275 575 aa3.03□□□□□ -1.92
UBX4YMR067C NOP1P15646 327 aaKnown RBP3.03□□□□□ -1.92
UBX4YMR067C ACH1P32316 526 aa3.03□□□□□ -1.92
UBX4YMR067C DBF20P32328 564 aa3.03□□□□□ -1.92
UBX4YMR067C PDB1P32473 366 aaKnown RBP3.03□□□□□ -1.92
UBX4YMR067C LOS1P33418 1100 aaPredicted RBP3.03□□□□□ -1.92
UBX4YMR067C YNK1P36010 153 aaKnown RBP3.03□□□□□ -1.92
UBX4YMR067C KRE9P39005 276 aa3.03□□□□□ -1.92
UBX4YMR067C SLZ1P40167 298 aa3.03□□□□□ -1.92
UBX4YMR067C SGM1P47166 707 aa3.03□□□□□ -1.92
UBX4YMR067C RRT6P53117 311 aaPredicted RBP3.03□□□□□ -1.92
UBX4YMR067C TDA7P53882 636 aaPredicted RBP3.03□□□□□ -1.92
UBX4YMR067C FMP45Q07651 309 aa3.03□□□□□ -1.92
UBX4YMR067C YOL159CQ08300 171 aa3.03□□□□□ -1.92
UBX4YMR067C ARG81P05085 880 aa3.02□□□□□ -1.93
UBX4YMR067C CBS2P14905 389 aa3.02□□□□□ -1.93
UBX4YMR067C PSY4P38193 441 aa3.02□□□□□ -1.93
UBX4YMR067C TSC10P38342 320 aa3.02□□□□□ -1.93
UBX4YMR067C DBP8P38719 431 aa3.02□□□□□ -1.93
UBX4YMR067C PSD1P39006 500 aa3.02□□□□□ -1.93
UBX4YMR067C AXL1P40851 1208 aa3.02□□□□□ -1.93
UBX4YMR067C YJL132WP47014 750 aa3.02□□□□□ -1.93
UBX4YMR067C YDL186WP48568 277 aa3.02□□□□□ -1.93
UBX4YMR067C STR3P53101 465 aaKnown RBP3.02□□□□□ -1.93
UBX4YMR067C YMR160WQ03823 816 aa3.02□□□□□ -1.93
UBX4YMR067C EMI2Q04409 500 aaKnown RBP3.02□□□□□ -1.93
UBX4YMR067C SMA2Q04658 369 aa3.02□□□□□ -1.93
UBX4YMR067C ERP1Q05359 219 aaKnown RBP3.02□□□□□ -1.93
UBX4YMR067C VID22Q05934 901 aa3.02□□□□□ -1.93
UBX4YMR067C SKG3Q06315 1026 aa3.02□□□□□ -1.93
UBX4YMR067C SSK1Q07084 712 aa3.02□□□□□ -1.93
UBX4YMR067C NBP2Q12163 236 aa3.02□□□□□ -1.93
UBX4YMR067C SSM4P40318 1319 aa3.01□□□□□ -1.93
UBX4YMR067C MRP20P32387 263 aa3.01□□□□□ -1.93
UBX4YMR067C VPS17P32913 551 aa3.01□□□□□ -1.93
UBX4YMR067C YBP1P38315 674 aa3.01□□□□□ -1.93
UBX4YMR067C LAG1P38703 411 aa3.01□□□□□ -1.93
UBX4YMR067C IKS1P47042 667 aa3.01□□□□□ -1.93
UBX4YMR067C PYK2P52489 506 aaKnown RBP3.01□□□□□ -1.93
UBX4YMR067C CDC45Q08032 650 aa3.01□□□□□ -1.93
UBX4YMR067C THI20Q08224 551 aa3.01□□□□□ -1.93
UBX4YMR067C RPL15AP05748 204 aaKnown RBP3□□□□□ -1.93
UBX4YMR067C SNF1P06782 633 aaKnown RBP3□□□□□ -1.93
UBX4YMR067C SNF3P10870 884 aa3□□□□□ -1.93
UBX4YMR067C AVT5P38176 459 aa3□□□□□ -1.93
UBX4YMR067C RTT101P47050 842 aa3□□□□□ -1.93
UBX4YMR067C AAD10P47182 288 aa3□□□□□ -1.93
UBX4YMR067C ERG26P53199 349 aaKnown RBP3□□□□□ -1.93
UBX4YMR067C PIL1P53252 339 aaKnown RBP3□□□□□ -1.93
UBX4YMR067C YVH1Q02256 364 aaKnown RBP3□□□□□ -1.93
UBX4YMR067C PSR1Q07800 427 aa3□□□□□ -1.93
UBX4YMR067C TRM8Q12009 286 aa3□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 25.2 ms