RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C ELO2P25358 347 aa2.3□□□□□ -2.04
SOK2YMR016C POL4P25615 582 aa2.3□□□□□ -2.04
SOK2YMR016C LAC1P28496 418 aa2.3□□□□□ -2.04
SOK2YMR016C RPT3P33298 428 aaKnown RBP2.3□□□□□ -2.04
SOK2YMR016C AAP1P37898 856 aaKnown RBP2.3□□□□□ -2.04
SOK2YMR016C VPS41P38959 992 aa2.3□□□□□ -2.04
SOK2YMR016C CIN1P40987 1014 aa2.3□□□□□ -2.04
SOK2YMR016C YFR020WP43600 232 aa2.3□□□□□ -2.04
SOK2YMR016C DRN1P53255 507 aaKnown RBP2.3□□□□□ -2.04
SOK2YMR016C RBG2P53295 368 aaKnown RBP2.3□□□□□ -2.04
SOK2YMR016C YNL144CP53907 740 aa2.3□□□□□ -2.04
SOK2YMR016C YPL071CQ02864 156 aa2.3□□□□□ -2.04
SOK2YMR016C MSC1Q03104 513 aa2.3□□□□□ -2.04
SOK2YMR016C CTI6Q08923 506 aa2.3□□□□□ -2.04
SOK2YMR016C BAG7Q12128 409 aa2.3□□□□□ -2.04
SOK2YMR016C SKI3P17883 1432 aaKnown RBP2.3□□□□□ -2.04
SOK2YMR016C MLP2P40457 1679 aa2.29□□□□□ -2.04
SOK2YMR016C GAL4P04386 881 aa2.29□□□□□ -2.04
SOK2YMR016C HEM1P09950 548 aaPredicted RBP2.29□□□□□ -2.04
SOK2YMR016C CDC24P11433 854 aaPredicted RBP2.29□□□□□ -2.04
SOK2YMR016C TIF3P34167 436 aaKnown RBP2.29□□□□□ -2.04
SOK2YMR016C UME6P39001 836 aa2.29□□□□□ -2.04
SOK2YMR016C NOC2P39744 710 aaKnown RBP2.29□□□□□ -2.04
SOK2YMR016C SGM1P47166 707 aa2.29□□□□□ -2.04
SOK2YMR016C YDR109CQ04585 715 aa2.29□□□□□ -2.04
SOK2YMR016C RPS10AQ08745 105 aaPredicted RBP2.29□□□□□ -2.04
SOK2YMR016C LYS21Q12122 440 aaKnown RBP2.29□□□□□ -2.04
SOK2YMR016C YBT1P32386 1661 aa2.29□□□□□ -2.04
SOK2YMR016C GPA1P08539 472 aa2.29□□□□□ -2.04
SOK2YMR016C PTC6P25646 442 aa2.29□□□□□ -2.04
SOK2YMR016C CMK1P27466 446 aaKnown RBP2.29□□□□□ -2.04
SOK2YMR016C ASK1P35734 292 aa2.29□□□□□ -2.04
SOK2YMR016C AUR1P36107 401 aaPredicted RBP2.29□□□□□ -2.04
SOK2YMR016C PXL1P36166 706 aa2.29□□□□□ -2.04
SOK2YMR016C MRPL36P36531 177 aa2.29□□□□□ -2.04
SOK2YMR016C MTG2P38860 518 aa2.29□□□□□ -2.04
SOK2YMR016C CCT4P39078 528 aaKnown RBP2.29□□□□□ -2.04
SOK2YMR016C FLC2P39719 783 aa2.29□□□□□ -2.04
SOK2YMR016C RGI2P40188 164 aa2.29□□□□□ -2.04
SOK2YMR016C DJP1P40564 432 aa2.29□□□□□ -2.04
SOK2YMR016C YFR016CP43597 1233 aaKnown RBP2.29□□□□□ -2.04
SOK2YMR016C KTR5P53966 522 aaPredicted RBP2.29□□□□□ -2.04
SOK2YMR016C RSM28Q03430 361 aa2.29□□□□□ -2.04
SOK2YMR016C YDR131CQ03899 556 aa2.29□□□□□ -2.04
SOK2YMR016C SPN1Q06505 410 aaPredicted RBP2.29□□□□□ -2.04
SOK2YMR016C CRT10Q08226 957 aa2.29□□□□□ -2.04
SOK2YMR016C AHA1Q12449 350 aaKnown RBP2.29□□□□□ -2.04
SOK2YMR016C YPT6Q99260 215 aa2.29□□□□□ -2.04
SOK2YMR016C YMR084WA2P2R3 262 aa2.28□□□□□ -2.04
SOK2YMR016C ARG3P05150 338 aa2.28□□□□□ -2.04
SOK2YMR016C ARD1P07347 238 aaPredicted RBP2.28□□□□□ -2.04
SOK2YMR016C RPC34P32910 317 aa2.28□□□□□ -2.04
SOK2YMR016C LEU5P38702 357 aa2.28□□□□□ -2.04
SOK2YMR016C ECM10P39987 644 aa2.28□□□□□ -2.04
SOK2YMR016C VMA13P41807 478 aaKnown RBP2.28□□□□□ -2.04
SOK2YMR016C RPN11P43588 306 aaKnown RBP2.28□□□□□ -2.04
SOK2YMR016C LSC1P53598 329 aaKnown RBP2.28□□□□□ -2.04
SOK2YMR016C JJJ1P53863 590 aa2.28□□□□□ -2.04
SOK2YMR016C SKG3Q06315 1026 aa2.28□□□□□ -2.04
SOK2YMR016C NCE102Q12207 173 aaRIP-Chip data2.28□□□□□ -2.04not detected
SOK2YMR016C NPL6P32832 435 aa2.28□□□□□ -2.05
SOK2YMR016C ADE17P38009 592 aaKnown RBP2.28□□□□□ -2.05
SOK2YMR016C YIL161WP40449 235 aaKnown RBP2.28□□□□□ -2.05
SOK2YMR016C MET28P40573 187 aa2.28□□□□□ -2.05
SOK2YMR016C HXT9P40885 567 aa2.28□□□□□ -2.05
SOK2YMR016C HOS2P53096 452 aaPredicted RBP2.28□□□□□ -2.05
SOK2YMR016C COG2P53271 262 aa2.28□□□□□ -2.05
SOK2YMR016C ADE13Q05911 482 aaKnown RBP2.28□□□□□ -2.05
SOK2YMR016C YLR345WQ06137 509 aa2.28□□□□□ -2.05
SOK2YMR016C BUD7Q08754 746 aa2.28□□□□□ -2.05
SOK2YMR016C LEA1Q08963 238 aaPredicted RBP2.28□□□□□ -2.05
SOK2YMR016C YOR111WQ99210 232 aa2.28□□□□□ -2.05
SOK2YMR016C TY1B-JR2P47100 1755 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C TY1B-ER2Q03619 1755 aa2.27□□□□□ -2.05
SOK2YMR016C TY1B-MR1Q04214 1755 aa2.27□□□□□ -2.05
SOK2YMR016C TY1B-MR2Q04670 1755 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C TY1B-LR1Q12088 1755 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C TY1B-NL1Q12112 1755 aa2.27□□□□□ -2.05
SOK2YMR016C TY1B-GR1Q12141 1755 aa2.27□□□□□ -2.05
SOK2YMR016C TY1B-BLQ12490 1755 aa2.27□□□□□ -2.05
SOK2YMR016C STE50P25344 346 aa2.27□□□□□ -2.05
SOK2YMR016C PDB1P32473 366 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C RPF2P36160 344 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C KEL1P38853 1164 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C SRB7P47822 140 aa2.27□□□□□ -2.05
SOK2YMR016C APT1P49435 187 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C PKP2P53170 491 aa2.27□□□□□ -2.05
SOK2YMR016C CWC22P53333 577 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C YTP1P53584 459 aa2.27□□□□□ -2.05
SOK2YMR016C MRPL19P53875 158 aa2.27□□□□□ -2.05
SOK2YMR016C ASI1P54074 624 aa2.27□□□□□ -2.05
SOK2YMR016C NUP53Q03790 475 aa2.27□□□□□ -2.05
SOK2YMR016C GET3Q12154 354 aaKnown RBP2.27□□□□□ -2.05
SOK2YMR016C RRD2Q12461 358 aa2.27□□□□□ -2.05
SOK2YMR016C SKM1Q12469 655 aa2.27□□□□□ -2.05
SOK2YMR016C MRP7P12687 371 aa2.27□□□□□ -2.05
SOK2YMR016C CBS1P14066 229 aa2.27□□□□□ -2.05
SOK2YMR016C PFK2P16862 959 aaKnown RBP RIP-Chip data2.27□□□□□ -2.05not detected
SOK2YMR016C PGS1P25578 521 aa2.27□□□□□ -2.05
SOK2YMR016C NUP120P35729 1037 aa2.27□□□□□ -2.05
Retrieved 100 of 5,963 RNA–protein pairs in 17.5 ms