RNA–Protein interactions for RNA: YML107C

PML39, Transcript of Protein required for nuclear retention of unspliced pre-mRNAs, yeast

Gene PML39, Length 1,005 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
PML39	YML107C	DBP8	P38719	431 aa		4.12	□□□□□ -1.75
PML39	YML107C	PCL6	P40038	420 aa		4.12	□□□□□ -1.75
PML39	YML107C	STR3	P53101	465 aa	Known RBP	4.12	□□□□□ -1.75
PML39	YML107C	SUB1	P54000	292 aa	Known RBP	4.12	□□□□□ -1.75
PML39	YML107C	BUD22	Q04347	519 aa	Known RBP	4.12	□□□□□ -1.75
PML39	YML107C	EMI2	Q04409	500 aa	Known RBP	4.12	□□□□□ -1.75
PML39	YML107C	YDL121C	Q07541	149 aa		4.12	□□□□□ -1.75
PML39	YML107C	YOL159C	Q08300	171 aa		4.12	□□□□□ -1.75
PML39	YML107C	YDR056C	Q12025	205 aa		4.12	□□□□□ -1.75
PML39	YML107C	LEU9	Q12166	604 aa	Known RBP	4.12	□□□□□ -1.75
PML39	YML107C	ARG81	P05085	880 aa		4.11	□□□□□ -1.75
PML39	YML107C	YCK1	P23291	538 aa		4.11	□□□□□ -1.75
PML39	YML107C	PDR3	P33200	976 aa		4.11	□□□□□ -1.75
PML39	YML107C	ANS1	P38832	159 aa		4.11	□□□□□ -1.75
PML39	YML107C	ELO1	P39540	310 aa		4.11	□□□□□ -1.75
PML39	YML107C	PTR3	P43606	678 aa		4.11	□□□□□ -1.75
PML39	YML107C	LSC1	P53598	329 aa	Known RBP	4.11	□□□□□ -1.75
PML39	YML107C	ESBP6	P53918	673 aa		4.11	□□□□□ -1.75
PML39	YML107C	YDR415C	Q04033	374 aa	Predicted RBP	4.11	□□□□□ -1.75
PML39	YML107C	DPB4	Q04603	196 aa	Known RBP	4.11	□□□□□ -1.75
PML39	YML107C	ARP9	Q05123	467 aa		4.11	□□□□□ -1.75
PML39	YML107C	BUD7	Q08754	746 aa		4.11	□□□□□ -1.75
PML39	YML107C	YPT1	P01123	206 aa	Known RBP	4.1	□□□□□ -1.75
PML39	YML107C	PAH1	P32567	862 aa		4.1	□□□□□ -1.75
PML39	YML107C	YPK3	P38070	525 aa		4.1	□□□□□ -1.75
PML39	YML107C	ARC40	P38328	384 aa	Known RBP	4.1	□□□□□ -1.75
PML39	YML107C	YIL169C	P40442	995 aa		4.1	□□□□□ -1.75
PML39	YML107C	YIL152W	P40455	235 aa		4.1	□□□□□ -1.75
PML39	YML107C	YIL060W	P40519	144 aa		4.1	□□□□□ -1.75
PML39	YML107C	HXT9	P40885	567 aa		4.1	□□□□□ -1.75
PML39	YML107C	IAH1	P41734	238 aa		4.1	□□□□□ -1.75
PML39	YML107C	SAD1	P43589	448 aa		4.1	□□□□□ -1.75
PML39	YML107C	SCS3	P53012	380 aa		4.1	□□□□□ -1.75
PML39	YML107C	YGR127W	P53275	312 aa		4.1	□□□□□ -1.75
PML39	YML107C	DIG1	Q03063	452 aa	Known RBP	4.1	□□□□□ -1.75
PML39	YML107C	SVL3	Q03088	825 aa	Known RBP	4.1	□□□□□ -1.75
PML39	YML107C	YML037C	Q03703	340 aa		4.1	□□□□□ -1.75
PML39	YML107C	ATG26	Q06321	1198 aa		4.1	□□□□□ -1.75
PML39	YML107C	ECM30	Q06673	1274 aa		4.1	□□□□□ -1.75
PML39	YML107C	BUD21	Q08492	214 aa	Predicted RBP	4.1	□□□□□ -1.75
PML39	YML107C	SRL1	Q08673	210 aa		4.1	□□□□□ -1.75
PML39	YML107C	RDR1	Q08904	546 aa		4.1	□□□□□ -1.75
PML39	YML107C	SEC53	P07283	254 aa	Known RBP	4.09	□□□□□ -1.75
PML39	YML107C	RPL19A	P0CX82	189 aa	Known RBP	4.09	□□□□□ -1.75
PML39	YML107C	RPL19B	P0CX83	189 aa	Predicted RBP	4.09	□□□□□ -1.75
PML39	YML107C	SAN1	P22470	610 aa		4.09	□□□□□ -1.75
PML39	YML107C	PGS1	P25578	521 aa		4.09	□□□□□ -1.75
PML39	YML107C	POL4	P25615	582 aa		4.09	□□□□□ -1.75
PML39	YML107C	GAC1	P28006	793 aa		4.09	□□□□□ -1.75
PML39	YML107C	TSC10	P38342	320 aa		4.09	□□□□□ -1.75
PML39	YML107C	MET30	P39014	640 aa		4.09	□□□□□ -1.75
PML39	YML107C	SGM1	P47166	707 aa		4.09	□□□□□ -1.75
PML39	YML107C	LYS4	P49367	693 aa	Predicted RBP	4.09	□□□□□ -1.75
PML39	YML107C	DUO1	P53168	247 aa	Known RBP	4.09	□□□□□ -1.75
PML39	YML107C	EKI1	Q03764	534 aa		4.09	□□□□□ -1.75
PML39	YML107C	NUP53	Q03790	475 aa		4.09	□□□□□ -1.75
PML39	YML107C	YLR281C	Q05863	155 aa		4.09	□□□□□ -1.75
PML39	YML107C	TEN1	Q07921	160 aa		4.09	□□□□□ -1.75
PML39	YML107C	CIR2	Q08822	631 aa		4.09	□□□□□ -1.75
PML39	YML107C	NOP58	Q12499	511 aa	Known RBP	4.09	□□□□□ -1.75
PML39	YML107C	AAC3	P18238	307 aa		4.08	□□□□□ -1.76
PML39	YML107C	YIH1	P25637	258 aa		4.08	□□□□□ -1.76
PML39	YML107C	SAC6	P32599	642 aa	Known RBP	4.08	□□□□□ -1.76
PML39	YML107C	RKM3	P38222	552 aa		4.08	□□□□□ -1.76
PML39	YML107C	ICS2	P38284	255 aa		4.08	□□□□□ -1.76
PML39	YML107C	LEU5	P38702	357 aa		4.08	□□□□□ -1.76
PML39	YML107C	NOP16	P40007	231 aa	Known RBP	4.08	□□□□□ -1.76
PML39	YML107C	LCL3	P53153	274 aa		4.08	□□□□□ -1.76
PML39	YML107C	ERG26	P53199	349 aa	Known RBP	4.08	□□□□□ -1.76
PML39	YML107C	BET4	Q00618	327 aa		4.08	□□□□□ -1.76
PML39	YML107C	MAK10	Q02197	733 aa		4.08	□□□□□ -1.76
PML39	YML107C	GRC3	Q07845	632 aa		4.08	□□□□□ -1.76
PML39	YML107C	REV3	P14284	1504 aa		4.07	□□□□□ -1.76
PML39	YML107C	SEM1	O94742	89 aa		4.07	□□□□□ -1.76
PML39	YML107C	ARD1	P07347	238 aa	Predicted RBP	4.07	□□□□□ -1.76
PML39	YML107C	SNF3	P10870	884 aa		4.07	□□□□□ -1.76
PML39	YML107C	YCR043C	P25361	127 aa		4.07	□□□□□ -1.76
PML39	YML107C	MGR1	P25573	417 aa		4.07	□□□□□ -1.76
PML39	YML107C	NOP4	P37838	685 aa	Known RBP	4.07	□□□□□ -1.76
PML39	YML107C	ROT2	P38138	954 aa		4.07	□□□□□ -1.76
PML39	YML107C	RTS2	P40962	232 aa		4.07	□□□□□ -1.76
PML39	YML107C	TES1	P41903	349 aa	Known RBP	4.07	□□□□□ -1.76
PML39	YML107C	FAR3	P46671	204 aa		4.07	□□□□□ -1.76
PML39	YML107C	YMR254C	Q04838	102 aa		4.07	□□□□□ -1.76
PML39	YML107C	MF(ALPHA)1	P01149	165 aa		4.06	□□□□□ -1.76
PML39	YML107C	YFL068W	P0CX99	160 aa		4.06	□□□□□ -1.76
PML39	YML107C	YLL066W-A	P0CY00	160 aa		4.06	□□□□□ -1.76
PML39	YML107C	YLL067W-A	P0CY01	160 aa		4.06	□□□□□ -1.76
PML39	YML107C	GID7	P25569	745 aa		4.06	□□□□□ -1.76
PML39	YML107C	CMK1	P27466	446 aa	Known RBP	4.06	□□□□□ -1.76
PML39	YML107C	RSM23	Q01163	450 aa		4.06	□□□□□ -1.76
PML39	YML107C	FMP42	Q04991	504 aa		4.06	□□□□□ -1.76
PML39	YML107C	ADE13	Q05911	482 aa	Known RBP	4.06	□□□□□ -1.76
PML39	YML107C	YLR352W	Q06479	807 aa		4.06	□□□□□ -1.76
PML39	YML107C	LUC7	Q07508	261 aa	Predicted RBP	4.06	□□□□□ -1.76
PML39	YML107C	FMP40	Q08968	688 aa	Predicted RBP	4.06	□□□□□ -1.76
PML39	YML107C	BNI1	P41832	1953 aa		4.05	□□□□□ -1.76
PML39	YML107C	PUT2	P07275	575 aa		4.05	□□□□□ -1.76
PML39	YML107C	KAR3	P17119	729 aa		4.05	□□□□□ -1.76
PML39	YML107C	BOS1	P25385	244 aa		4.05	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 92.4 ms