RNA–Protein interactions for RNA: YLR275W

SMD2, Transcript of Core Sm protein Sm D2, yeastyeast

Gene SMD2, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SMD2YLR275W VMS1Q04311 632 aaKnown RBP3.87□□□□□ -1.79
SMD2YLR275W YMR230W-AQ3E7B5 62 aa3.87□□□□□ -1.79
SMD2YLR275W SPE2P21182 396 aa3.86□□□□□ -1.79
SMD2YLR275W ALY1P36117 915 aa3.86□□□□□ -1.79
SMD2YLR275W RIM2P38127 377 aa3.86□□□□□ -1.79
SMD2YLR275W KTR3P38130 404 aaPredicted RBP3.86□□□□□ -1.79
SMD2YLR275W ERG7P38604 731 aa3.86□□□□□ -1.79
SMD2YLR275W ARP1P38696 384 aa3.86□□□□□ -1.79
SMD2YLR275W KAP123P40069 1113 aaKnown RBP3.86□□□□□ -1.79
SMD2YLR275W AZF1P41696 914 aa3.86□□□□□ -1.79
SMD2YLR275W PIL1P53252 339 aaKnown RBP3.86□□□□□ -1.79
SMD2YLR275W CRZ1P53968 678 aa3.86□□□□□ -1.79
SMD2YLR275W INA17Q02888 182 aa3.86□□□□□ -1.79
SMD2YLR275W ADE13Q05911 482 aaKnown RBP3.86□□□□□ -1.79
SMD2YLR275W SKG3Q06315 1026 aa3.86□□□□□ -1.79
SMD2YLR275W TIP41Q12199 356 aa3.86□□□□□ -1.79
SMD2YLR275W CSR2Q12734 1121 aa3.86□□□□□ -1.79
SMD2YLR275W GLN3P18494 730 aa3.85□□□□□ -1.79
SMD2YLR275W PGS1P25578 521 aa3.85□□□□□ -1.79
SMD2YLR275W VPS24P36095 224 aaKnown RBP3.85□□□□□ -1.79
SMD2YLR275W DIA4P38705 446 aaPredicted RBP3.85□□□□□ -1.79
SMD2YLR275W AXL2P38928 823 aa3.85□□□□□ -1.79
SMD2YLR275W STR3P53101 465 aaKnown RBP3.85□□□□□ -1.79
SMD2YLR275W SNO4Q04902 237 aa3.85□□□□□ -1.79
SMD2YLR275W RTT103Q05543 409 aa3.85□□□□□ -1.79
SMD2YLR275W RDR1Q08904 546 aa3.85□□□□□ -1.79
SMD2YLR275W HSP33Q08914 237 aaKnown RBP3.85□□□□□ -1.79
SMD2YLR275W HSP32Q08992 237 aa3.85□□□□□ -1.79
SMD2YLR275W NBP2Q12163 236 aa3.85□□□□□ -1.79
SMD2YLR275W PMS1P14242 873 aa3.84□□□□□ -1.79
SMD2YLR275W MIC60P36112 540 aa3.84□□□□□ -1.79
SMD2YLR275W YNG2P38806 282 aaKnown RBP3.84□□□□□ -1.79
SMD2YLR275W BUR6P40096 142 aa3.84□□□□□ -1.79
SMD2YLR275W FMP10P40098 244 aa3.84□□□□□ -1.79
SMD2YLR275W SOL4P53315 255 aa3.84□□□□□ -1.79
SMD2YLR275W ZDS2P54786 942 aa3.84□□□□□ -1.79
SMD2YLR275W YOL087CQ99247 1116 aa3.84□□□□□ -1.79
SMD2YLR275W YML002WP0CF17 737 aa3.83□□□□□ -1.8
SMD2YLR275W PWP2P25635 923 aaKnown RBP3.83□□□□□ -1.8
SMD2YLR275W MCM4P30665 933 aaKnown RBP3.83□□□□□ -1.8
SMD2YLR275W PDB1P32473 366 aaKnown RBP3.83□□□□□ -1.8
SMD2YLR275W CBF2P32504 956 aa3.83□□□□□ -1.8
SMD2YLR275W PHD1P36093 366 aa3.83□□□□□ -1.8
SMD2YLR275W UBA4P38820 440 aa3.83□□□□□ -1.8
SMD2YLR275W ANS1P38832 159 aa3.83□□□□□ -1.8
SMD2YLR275W INN1P53901 409 aa3.83□□□□□ -1.8
SMD2YLR275W IOC4Q04213 475 aa3.83□□□□□ -1.8
SMD2YLR275W PSR1Q07800 427 aa3.83□□□□□ -1.8
SMD2YLR275W DAP1Q12091 152 aa3.83□□□□□ -1.8
SMD2YLR275W NKP1Q12493 238 aa3.83□□□□□ -1.8
SMD2YLR275W SNF3P10870 884 aa3.82□□□□□ -1.8
SMD2YLR275W ERG1P32476 496 aaKnown RBP3.82□□□□□ -1.8
SMD2YLR275W GUF1P46943 645 aa3.82□□□□□ -1.8
SMD2YLR275W AAD10P47182 288 aa3.82□□□□□ -1.8
SMD2YLR275W RPS7BP48164 190 aaKnown RBP3.82□□□□□ -1.8
SMD2YLR275W EMI2Q04409 500 aaKnown RBP3.82□□□□□ -1.8
SMD2YLR275W TMA64Q04600 565 aaKnown RBP3.82□□□□□ -1.8
SMD2YLR275W PDA1P16387 420 aaKnown RBP3.81□□□□□ -1.8
SMD2YLR275W SPC34P36131 295 aa3.81□□□□□ -1.8
SMD2YLR275W FUI1P38196 639 aa3.81□□□□□ -1.8
SMD2YLR275W TSC10P38342 320 aa3.81□□□□□ -1.8
SMD2YLR275W DBP8P38719 431 aa3.81□□□□□ -1.8
SMD2YLR275W DIM1P41819 318 aaKnown RBP3.81□□□□□ -1.8
SMD2YLR275W SGM1P47166 707 aa3.81□□□□□ -1.8
SMD2YLR275W DIA3P52290 468 aa3.81□□□□□ -1.8
SMD2YLR275W ARG81P05085 880 aa3.8□□□□□ -1.8
SMD2YLR275W PWP1P21304 576 aaKnown RBP3.8□□□□□ -1.8
SMD2YLR275W RRN3P36070 627 aa3.8□□□□□ -1.8
SMD2YLR275W RRP3P38712 501 aaKnown RBP3.8□□□□□ -1.8
SMD2YLR275W ELO1P39540 310 aa3.8□□□□□ -1.8
SMD2YLR275W YER130CP39959 443 aa3.8□□□□□ -1.8
SMD2YLR275W YJR061WP40355 935 aa3.8□□□□□ -1.8
SMD2YLR275W YJL068CP40363 299 aa3.8□□□□□ -1.8
SMD2YLR275W TDA7P53882 636 aaPredicted RBP3.8□□□□□ -1.8
SMD2YLR275W YML131WQ03102 365 aa3.8□□□□□ -1.8
SMD2YLR275W SCW10Q04951 389 aa3.8□□□□□ -1.8
SMD2YLR275W RIX7Q07844 837 aaKnown RBP3.8□□□□□ -1.8
SMD2YLR275W ARP6Q12509 438 aa3.8□□□□□ -1.8
SMD2YLR275W PUT2P07275 575 aa3.79□□□□□ -1.8
SMD2YLR275W VMA16P23968 213 aa3.79□□□□□ -1.8
SMD2YLR275W ADH7P25377 361 aa3.79□□□□□ -1.8
SMD2YLR275W SNC1P31109 117 aa3.79□□□□□ -1.8
SMD2YLR275W PRO3P32263 286 aaKnown RBP3.79□□□□□ -1.8
SMD2YLR275W RPS10BP46784 105 aaKnown RBP3.79□□□□□ -1.8
SMD2YLR275W SIP4P46954 829 aa3.79□□□□□ -1.8
SMD2YLR275W ERG26P53199 349 aaKnown RBP3.79□□□□□ -1.8
SMD2YLR275W GIS2P53849 153 aaKnown RBP RIP-Chip data3.79□□□□□ -1.8not detected
SMD2YLR275W CBK1P53894 756 aa3.79□□□□□ -1.8
SMD2YLR275W MSS11Q03825 758 aa3.79□□□□□ -1.8
SMD2YLR275W SSK1Q07084 712 aa3.79□□□□□ -1.8
SMD2YLR275W FMP45Q07651 309 aa3.79□□□□□ -1.8
SMD2YLR275W RPS10AQ08745 105 aaPredicted RBP3.79□□□□□ -1.8
SMD2YLR275W LEU9Q12166 604 aaKnown RBP3.79□□□□□ -1.8
SMD2YLR275W TYR1P20049 452 aa3.78□□□□□ -1.8
SMD2YLR275W ACH1P32316 526 aa3.78□□□□□ -1.8
SMD2YLR275W ROT2P38138 954 aa3.78□□□□□ -1.8
SMD2YLR275W AXL1P40851 1208 aa3.78□□□□□ -1.8
SMD2YLR275W PYK2P52489 506 aaKnown RBP3.78□□□□□ -1.8
SMD2YLR275W ECM30Q06673 1274 aa3.78□□□□□ -1.8
SMD2YLR275W GRC3Q07845 632 aa3.78□□□□□ -1.8
Retrieved 100 of 5,963 RNA–protein pairs in 15.3 ms