RNA–Protein interactions for RNA: YLR211C

ATG38, Transcript of Homodimeric subunit of autophagy-specific PtdIns-3-kinase complex I, yeastyeast

Gene ATG38, Length 681 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG38YLR211C SOL4P53315 255 aa3.47□□□□□ -1.85
ATG38YLR211C RPB2P08518 1224 aaKnown RBP3.46□□□□□ -1.86
ATG38YLR211C XRS2P33301 854 aa3.46□□□□□ -1.86
ATG38YLR211C SNU114P36048 1008 aaKnown RBP3.46□□□□□ -1.86
ATG38YLR211C PHD1P36093 366 aa3.46□□□□□ -1.86
ATG38YLR211C RPS10BP46784 105 aaKnown RBP3.46□□□□□ -1.86
ATG38YLR211C PIL1P53252 339 aaKnown RBP3.46□□□□□ -1.86
ATG38YLR211C RPS10AQ08745 105 aaPredicted RBP3.46□□□□□ -1.86
ATG38YLR211C INP53Q12271 1107 aa3.46□□□□□ -1.86
ATG38YLR211C SNF3P10870 884 aa3.45□□□□□ -1.86
ATG38YLR211C RPS2P25443 254 aaKnown RBP3.45□□□□□ -1.86
ATG38YLR211C ATS1P31386 333 aa3.45□□□□□ -1.86
ATG38YLR211C SMC3P47037 1230 aa3.45□□□□□ -1.86
ATG38YLR211C VID22Q05934 901 aa3.45□□□□□ -1.86
ATG38YLR211C RTT109Q07794 436 aa3.45□□□□□ -1.86
ATG38YLR211C YBR085C-AO43137 85 aa3.44□□□□□ -1.86
ATG38YLR211C MCM4P30665 933 aaKnown RBP3.44□□□□□ -1.86
ATG38YLR211C ACH1P32316 526 aa3.44□□□□□ -1.86
ATG38YLR211C MRP20P32387 263 aa3.44□□□□□ -1.86
ATG38YLR211C TEF4P36008 412 aaKnown RBP3.44□□□□□ -1.86
ATG38YLR211C SDS24P38314 527 aa3.44□□□□□ -1.86
ATG38YLR211C YHR218WP38899 603 aa3.44□□□□□ -1.86
ATG38YLR211C DIM1P41819 318 aaKnown RBP3.44□□□□□ -1.86
ATG38YLR211C TDA7P53882 636 aaPredicted RBP3.44□□□□□ -1.86
ATG38YLR211C INN1P53901 409 aa3.44□□□□□ -1.86
ATG38YLR211C RBA50Q04418 439 aa3.44□□□□□ -1.86
ATG38YLR211C HCR1Q05775 265 aaKnown RBP3.44□□□□□ -1.86
ATG38YLR211C FMP45Q07651 309 aa3.44□□□□□ -1.86
ATG38YLR211C TLG2Q08144 397 aa3.44□□□□□ -1.86
ATG38YLR211C RDR1Q08904 546 aa3.44□□□□□ -1.86
ATG38YLR211C YLR302CO13544 120 aa3.43□□□□□ -1.86
ATG38YLR211C LCB1P25045 558 aaKnown RBP3.43□□□□□ -1.86
ATG38YLR211C CDC15P27636 974 aa3.43□□□□□ -1.86
ATG38YLR211C MIC60P36112 540 aa3.43□□□□□ -1.86
ATG38YLR211C IES5P40060 125 aa3.43□□□□□ -1.86
ATG38YLR211C YJL068CP40363 299 aa3.43□□□□□ -1.86
ATG38YLR211C INA17Q02888 182 aa3.43□□□□□ -1.86
ATG38YLR211C YMR087WQ04299 284 aa3.43□□□□□ -1.86
ATG38YLR211C APL4Q12028 832 aa3.43□□□□□ -1.86
ATG38YLR211C SGV1P23293 657 aaKnown RBP3.42□□□□□ -1.86
ATG38YLR211C PRO3P32263 286 aaKnown RBP3.42□□□□□ -1.86
ATG38YLR211C YKL050CP35736 922 aa3.42□□□□□ -1.86
ATG38YLR211C ALY1P36117 915 aa3.42□□□□□ -1.86
ATG38YLR211C YBR139WP38109 508 aa3.42□□□□□ -1.86
ATG38YLR211C UIP3P39547 235 aa3.42□□□□□ -1.86
ATG38YLR211C SLZ1P40167 298 aa3.42□□□□□ -1.86
ATG38YLR211C RIC1P40395 1056 aa3.42□□□□□ -1.86
ATG38YLR211C PYK2P52489 506 aaKnown RBP3.42□□□□□ -1.86
ATG38YLR211C GTR1Q00582 310 aa3.42□□□□□ -1.86
ATG38YLR211C RPM2Q02773 1202 aa3.42□□□□□ -1.86
ATG38YLR211C MUB1Q03162 620 aa3.42□□□□□ -1.86
ATG38YLR211C MSS11Q03825 758 aa3.42□□□□□ -1.86
ATG38YLR211C RCO1Q04779 684 aa3.42□□□□□ -1.86
ATG38YLR211C DIC1Q06143 298 aa3.42□□□□□ -1.86
ATG38YLR211C NUS1Q12063 375 aa3.42□□□□□ -1.86
ATG38YLR211C PDH1Q12428 516 aaKnown RBP3.42□□□□□ -1.86
ATG38YLR211C YOL087CQ99247 1116 aa3.42□□□□□ -1.86
ATG38YLR211C RPL15AP05748 204 aaKnown RBP3.41□□□□□ -1.86
ATG38YLR211C CPR3P25719 182 aa3.41□□□□□ -1.86
ATG38YLR211C CNS1P33313 385 aa3.41□□□□□ -1.86
ATG38YLR211C TSC10P38342 320 aa3.41□□□□□ -1.86
ATG38YLR211C DIA4P38705 446 aaPredicted RBP3.41□□□□□ -1.86
ATG38YLR211C AXL2P38928 823 aa3.41□□□□□ -1.86
ATG38YLR211C AXL1P40851 1208 aa3.41□□□□□ -1.86
ATG38YLR211C SAP185P40856 1058 aa3.41□□□□□ -1.86
ATG38YLR211C ROK1P45818 564 aaPredicted RBP3.41□□□□□ -1.86
ATG38YLR211C RPS7BP48164 190 aaKnown RBP3.41□□□□□ -1.86
ATG38YLR211C SNO4Q04902 237 aa3.41□□□□□ -1.86
ATG38YLR211C HSP33Q08914 237 aaKnown RBP3.41□□□□□ -1.86
ATG38YLR211C HSP32Q08992 237 aa3.41□□□□□ -1.86
ATG38YLR211C PFK2P16862 959 aaKnown RBP RIP-Chip data3.4□□□□□ -1.87not detected
ATG38YLR211C AGP2P38090 596 aa3.4□□□□□ -1.87
ATG38YLR211C PSY4P38193 441 aa3.4□□□□□ -1.87
ATG38YLR211C UME6P39001 836 aa3.4□□□□□ -1.87
ATG38YLR211C ELO1P39540 310 aa3.4□□□□□ -1.87
ATG38YLR211C BUR6P40096 142 aa3.4□□□□□ -1.87
ATG38YLR211C SKG3Q06315 1026 aa3.4□□□□□ -1.87
ATG38YLR211C PSR2Q07949 397 aa3.4□□□□□ -1.87
ATG38YLR211C PPT2Q12036 173 aa3.4□□□□□ -1.87
ATG38YLR211C PUT2P07275 575 aa3.39□□□□□ -1.87
ATG38YLR211C PWP1P21304 576 aaKnown RBP3.39□□□□□ -1.87
ATG38YLR211C BUD14P27637 709 aa3.39□□□□□ -1.87
ATG38YLR211C AGA1P32323 725 aa3.39□□□□□ -1.87
ATG38YLR211C AVT5P38176 459 aa3.39□□□□□ -1.87
ATG38YLR211C MDM31P38880 579 aa3.39□□□□□ -1.87
ATG38YLR211C IKS1P47042 667 aa3.39□□□□□ -1.87
ATG38YLR211C SGM1P47166 707 aa3.39□□□□□ -1.87
ATG38YLR211C YDL186WP48568 277 aa3.39□□□□□ -1.87
ATG38YLR211C EMI2Q04409 500 aaKnown RBP3.39□□□□□ -1.87
ATG38YLR211C THI20Q08224 551 aa3.39□□□□□ -1.87
ATG38YLR211C RSA1Q08932 381 aa3.39□□□□□ -1.87
ATG38YLR211C NKP1Q12493 238 aa3.39□□□□□ -1.87
ATG38YLR211C ARP6Q12509 438 aa3.39□□□□□ -1.87
ATG38YLR211C NOP1P15646 327 aaKnown RBP3.38□□□□□ -1.87
ATG38YLR211C TYR1P20049 452 aa3.38□□□□□ -1.87
ATG38YLR211C SNC1P31109 117 aa3.38□□□□□ -1.87
ATG38YLR211C PDB1P32473 366 aaKnown RBP3.38□□□□□ -1.87
ATG38YLR211C YNG2P38806 282 aaKnown RBP3.38□□□□□ -1.87
ATG38YLR211C YER010CP40011 234 aa3.38□□□□□ -1.87
ATG38YLR211C YJR061WP40355 935 aa3.38□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 15.6 ms