RNA–Protein interactions for RNA: YLR196W

PWP1, Transcript of Protein with WD-40 repeats involved in rRNA processing, yeastyeast

Gene PWP1, Length 1,731 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PWP1YLR196W TOF2Q02208 771 aa5.23□□□□□ -1.57
PWP1YLR196W NOG1Q02892 647 aaKnown RBP5.23□□□□□ -1.57
PWP1YLR196W ELP3Q02908 557 aaKnown RBP5.23□□□□□ -1.57
PWP1YLR196W SSY1Q03770 852 aa5.23□□□□□ -1.57
PWP1YLR196W YDR239CQ03780 787 aa5.23□□□□□ -1.57
PWP1YLR196W YDR249CQ03787 373 aa5.23□□□□□ -1.57
PWP1YLR196W RAD30Q04049 632 aa5.23□□□□□ -1.57
PWP1YLR196W TFC6Q06339 672 aa5.23□□□□□ -1.57
PWP1YLR196W YPR147CQ06522 304 aaKnown RBP5.23□□□□□ -1.57
PWP1YLR196W OSW1Q08692 278 aa5.23□□□□□ -1.57
PWP1YLR196W HFI1Q12060 488 aa5.23□□□□□ -1.57
PWP1YLR196W DCN1Q12395 269 aa5.23□□□□□ -1.57
PWP1YLR196W LDB19Q12502 818 aa5.23□□□□□ -1.57
PWP1YLR196W RMP1Q12530 201 aa5.23□□□□□ -1.57
PWP1YLR196W RRP12Q12754 1228 aaKnown RBP5.23□□□□□ -1.57
PWP1YLR196W KIN28P06242 306 aa5.22□□□□□ -1.57
PWP1YLR196W MRP2P10663 115 aaPredicted RBP5.22□□□□□ -1.57
PWP1YLR196W POL3P15436 1097 aa5.22□□□□□ -1.57
PWP1YLR196W PDC5P16467 563 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W APA2P22108 325 aa5.22□□□□□ -1.57
PWP1YLR196W VPS34P22543 875 aa5.22□□□□□ -1.57
PWP1YLR196W SPO11P23179 398 aa5.22□□□□□ -1.57
PWP1YLR196W CAD1P24813 409 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W PMT2P31382 759 aa5.22□□□□□ -1.57
PWP1YLR196W CTF13P35203 478 aa5.22□□□□□ -1.57
PWP1YLR196W RPC25P35718 212 aa5.22□□□□□ -1.57
PWP1YLR196W HMT1P38074 348 aa5.22□□□□□ -1.57
PWP1YLR196W YBL036CP38197 257 aa5.22□□□□□ -1.57
PWP1YLR196W PRS2P38620 318 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W APM2P38700 605 aa5.22□□□□□ -1.57
PWP1YLR196W YHR112CP38716 378 aa5.22□□□□□ -1.57
PWP1YLR196W MIP6P38760 659 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W YDR089WP38966 869 aa5.22□□□□□ -1.57
PWP1YLR196W VMA13P41807 478 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W IDS2P46958 469 aa5.22□□□□□ -1.57
PWP1YLR196W NET1P47035 1189 aa5.22□□□□□ -1.57
PWP1YLR196W IRC8P47046 822 aa5.22□□□□□ -1.57
PWP1YLR196W CCT8P47079 568 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W YGR042WP53227 271 aa5.22□□□□□ -1.57
PWP1YLR196W TWF1P53250 332 aa5.22□□□□□ -1.57
PWP1YLR196W YGR127WP53275 312 aa5.22□□□□□ -1.57
PWP1YLR196W IMP4P53941 290 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W KTR6P54070 446 aa5.22□□□□□ -1.57
PWP1YLR196W UME1Q03010 460 aa5.22□□□□□ -1.57
PWP1YLR196W ATP25Q03153 612 aa5.22□□□□□ -1.57
PWP1YLR196W YMR279CQ03263 540 aa5.22□□□□□ -1.57
PWP1YLR196W EBS1Q03466 884 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W VHS1Q03785 461 aa5.22□□□□□ -1.57
PWP1YLR196W RUB1Q03919 77 aa5.22□□□□□ -1.57
PWP1YLR196W BCH1Q05029 724 aa5.22□□□□□ -1.57
PWP1YLR196W CRR1Q05790 422 aa5.22□□□□□ -1.57
PWP1YLR196W YLR455WQ06188 304 aa5.22□□□□□ -1.57
PWP1YLR196W TRE2Q08693 809 aa5.22□□□□□ -1.57
PWP1YLR196W MDY2Q12285 212 aa5.22□□□□□ -1.57
PWP1YLR196W PAA1Q12447 191 aaKnown RBP5.22□□□□□ -1.57
PWP1YLR196W MDM12Q92328 271 aa5.22□□□□□ -1.57
PWP1YLR196W FRT1Q99332 602 aa5.22□□□□□ -1.57
PWP1YLR196W APA1P16550 321 aaKnown RBP5.21□□□□□ -1.58
PWP1YLR196W RNR1P21524 888 aaKnown RBP5.21□□□□□ -1.58
PWP1YLR196W CMK2P22517 447 aa5.21□□□□□ -1.58
PWP1YLR196W ATG22P25568 528 aa5.21□□□□□ -1.58
PWP1YLR196W CPR3P25719 182 aa5.21□□□□□ -1.58
PWP1YLR196W PET127P32606 800 aa5.21□□□□□ -1.58
PWP1YLR196W CLG1P35190 452 aa5.21□□□□□ -1.58
PWP1YLR196W HEK2P38199 381 aaKnown RBP RIP-Chip data5.21□□□□□ -1.58not detected
PWP1YLR196W STT3P39007 718 aaKnown RBP5.21□□□□□ -1.58
PWP1YLR196W YER010CP40011 234 aa5.21□□□□□ -1.58
PWP1YLR196W NUP82P40368 713 aa5.21□□□□□ -1.58
PWP1YLR196W ATM1P40416 690 aa5.21□□□□□ -1.58
PWP1YLR196W RRN7P40992 514 aa5.21□□□□□ -1.58
PWP1YLR196W YFR018CP43599 363 aa5.21□□□□□ -1.58
PWP1YLR196W NMD5P46970 1048 aa5.21□□□□□ -1.58
PWP1YLR196W YJL007CP47080 104 aa5.21□□□□□ -1.58
PWP1YLR196W BPL1P48445 690 aaPredicted RBP5.21□□□□□ -1.58
PWP1YLR196W GUP1P53154 560 aa5.21□□□□□ -1.58
PWP1YLR196W PRM1P53835 661 aa5.21□□□□□ -1.58
PWP1YLR196W YDR476CQ03362 224 aa5.21□□□□□ -1.58
PWP1YLR196W TIF35Q04067 274 aaKnown RBP5.21□□□□□ -1.58
PWP1YLR196W GPI17Q04080 534 aa5.21□□□□□ -1.58
PWP1YLR196W BUD22Q04347 519 aaKnown RBP5.21□□□□□ -1.58
PWP1YLR196W PLM2Q04383 521 aa5.21□□□□□ -1.58
PWP1YLR196W URC2Q04411 772 aa5.21□□□□□ -1.58
PWP1YLR196W DFG5Q05031 458 aa5.21□□□□□ -1.58
PWP1YLR196W YOL075CQ08234 1294 aa5.21□□□□□ -1.58
PWP1YLR196W BDS1Q08347 646 aa5.21□□□□□ -1.58
PWP1YLR196W LDB17Q12342 491 aa5.21□□□□□ -1.58
PWP1YLR196W EMP46Q12396 444 aa5.21□□□□□ -1.58
PWP1YLR196W HSH49Q99181 213 aaPredicted RBP5.21□□□□□ -1.58
PWP1YLR196W GAL4P04386 881 aa5.2□□□□□ -1.58
PWP1YLR196W RPL6BP05739 176 aaKnown RBP5.2□□□□□ -1.58
PWP1YLR196W FUM1P08417 488 aaKnown RBP5.2□□□□□ -1.58
PWP1YLR196W HMG2P12684 1045 aa5.2□□□□□ -1.58
PWP1YLR196W IMG1P25626 169 aa5.2□□□□□ -1.58
PWP1YLR196W DHR2P36009 735 aaPredicted RBP5.2□□□□□ -1.58
PWP1YLR196W NAT2P37293 288 aa5.2□□□□□ -1.58
PWP1YLR196W MCM7P38132 845 aa5.2□□□□□ -1.58
PWP1YLR196W TSC10P38342 320 aa5.2□□□□□ -1.58
PWP1YLR196W XDJ1P39102 459 aa5.2□□□□□ -1.58
PWP1YLR196W YAT2P40017 923 aa5.2□□□□□ -1.58
PWP1YLR196W OSW5P40219 148 aa5.2□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms