RNA–Protein interactions for RNA: YLR025W

SNF7, Transcript of One of four subunits of the ESCRT-III complex, yeastyeast

Gene SNF7, Length 723 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNF7YLR025W EDC3P39998 551 aaKnown RBP7.39□□□□□ -1.23
SNF7YLR025W SCS2P40075 244 aaKnown RBP7.39□□□□□ -1.23
SNF7YLR025W VPS25P47142 202 aa7.39□□□□□ -1.23
SNF7YLR025W NOP19P53317 196 aaPredicted RBP7.39□□□□□ -1.23
SNF7YLR025W LSM3P57743 89 aaKnown RBP7.39□□□□□ -1.23
SNF7YLR025W PET117Q02771 107 aa7.39□□□□□ -1.23
SNF7YLR025W SPC2Q04969 178 aa7.39□□□□□ -1.23
SNF7YLR025W ATG17Q06410 417 aa7.39□□□□□ -1.23
SNF7YLR025W ENT4Q07872 247 aa7.39□□□□□ -1.23
SNF7YLR025W SNX3Q08826 162 aaKnown RBP7.39□□□□□ -1.23
SNF7YLR025W HSH49Q99181 213 aaPredicted RBP7.39□□□□□ -1.23
SNF7YLR025W HEM2P05373 342 aa7.38□□□□□ -1.23
SNF7YLR025W YAK1P14680 807 aa7.38□□□□□ -1.23
SNF7YLR025W MEF1P25039 761 aa7.38□□□□□ -1.23
SNF7YLR025W YCR090CP25654 182 aaKnown RBP7.38□□□□□ -1.23
SNF7YLR025W BEM1P29366 551 aa7.38□□□□□ -1.23
SNF7YLR025W TFC1P32367 649 aa7.38□□□□□ -1.23
SNF7YLR025W YBR056WP38081 501 aa7.38□□□□□ -1.23
SNF7YLR025W YJR061WP40355 935 aa7.38□□□□□ -1.23
SNF7YLR025W BST1P43571 1029 aa7.38□□□□□ -1.23
SNF7YLR025W SPO74P45819 413 aa7.38□□□□□ -1.23
SNF7YLR025W SET2P46995 733 aaKnown RBP7.38□□□□□ -1.23
SNF7YLR025W RTT101P47050 842 aa7.38□□□□□ -1.23
SNF7YLR025W CCT8P47079 568 aaKnown RBP7.38□□□□□ -1.23
SNF7YLR025W ASN2P49090 572 aaKnown RBP7.38□□□□□ -1.23
SNF7YLR025W NMA2P53204 395 aa7.38□□□□□ -1.23
SNF7YLR025W TIM13P53299 105 aa7.38□□□□□ -1.23
SNF7YLR025W BUD32P53323 261 aa7.38□□□□□ -1.23
SNF7YLR025W INP2Q03824 705 aa7.38□□□□□ -1.23
SNF7YLR025W GSF2Q04697 403 aaKnown RBP7.38□□□□□ -1.23
SNF7YLR025W TDA6Q06466 467 aa7.38□□□□□ -1.23
SNF7YLR025W SGT1Q08446 395 aa7.38□□□□□ -1.23
SNF7YLR025W YLL054CQ12244 843 aa7.38□□□□□ -1.23
SNF7YLR025W MDY2Q12285 212 aa7.38□□□□□ -1.23
SNF7YLR025W MDM20Q12387 796 aaKnown RBP7.38□□□□□ -1.23
SNF7YLR025W HEM1P09950 548 aaPredicted RBP7.37□□□□□ -1.23
SNF7YLR025W SBP1P10080 294 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W HSP26P15992 214 aaKnown RBP RIP-Chip data7.37□□□□□ -1.23not detected
SNF7YLR025W ART10P18634 518 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W MSB1P21339 1137 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W CLB3P24870 427 aa7.37□□□□□ -1.23
SNF7YLR025W VPH1P32563 840 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W AST1P35183 429 aa7.37□□□□□ -1.23
SNF7YLR025W MDJ1P35191 511 aa7.37□□□□□ -1.23
SNF7YLR025W MAE1P36013 669 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W YHR131CP38835 850 aa7.37□□□□□ -1.23
SNF7YLR025W PEX28P38848 579 aa7.37□□□□□ -1.23
SNF7YLR025W YHR202WP38887 602 aa7.37□□□□□ -1.23
SNF7YLR025W PIC2P40035 300 aa7.37□□□□□ -1.23
SNF7YLR025W RGI2P40188 164 aa7.37□□□□□ -1.23
SNF7YLR025W GCV1P48015 400 aa7.37□□□□□ -1.23
SNF7YLR025W AIF1P52923 378 aa7.37□□□□□ -1.23
SNF7YLR025W ARI1P53111 347 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W PEX8P53248 589 aa7.37□□□□□ -1.23
SNF7YLR025W ARC35P53731 342 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W PRO2P54885 456 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W PEX13P80667 386 aa7.37□□□□□ -1.23
SNF7YLR025W RNY1Q02933 434 aaKnown RBP7.37□□□□□ -1.23
SNF7YLR025W LEA1Q08963 238 aaPredicted RBP7.37□□□□□ -1.23
SNF7YLR025W COX5AP00424 153 aa7.36□□□□□ -1.23
SNF7YLR025W SAN1P22470 610 aa7.36□□□□□ -1.23
SNF7YLR025W TRX2P22803 104 aaKnown RBP7.36□□□□□ -1.23
SNF7YLR025W AEP1P32493 518 aa7.36□□□□□ -1.23
SNF7YLR025W SPC42P36094 363 aa7.36□□□□□ -1.23
SNF7YLR025W KTR4P38131 464 aa7.36□□□□□ -1.23
SNF7YLR025W HAT2P39984 401 aa7.36□□□□□ -1.23
SNF7YLR025W ARB1P40024 610 aaKnown RBP7.36□□□□□ -1.23
SNF7YLR025W TAN1P53072 289 aaPredicted RBP7.36□□□□□ -1.23
SNF7YLR025W EFM5P53200 248 aaKnown RBP7.36□□□□□ -1.23
SNF7YLR025W SLM2P53955 656 aa7.36□□□□□ -1.23
SNF7YLR025W REG1Q00816 1014 aa7.36□□□□□ -1.23
SNF7YLR025W GCN5Q03330 439 aa7.36□□□□□ -1.23
SNF7YLR025W DYN3Q04949 312 aa7.36□□□□□ -1.23
SNF7YLR025W YMR226CQ05016 267 aaKnown RBP7.36□□□□□ -1.23
SNF7YLR025W MEU1Q07938 337 aaKnown RBP RIP-Chip data7.36□□□□□ -1.23not detected
SNF7YLR025W NSL1Q12143 216 aa7.36□□□□□ -1.23
SNF7YLR025W TRP3P00937 484 aa7.35□□□□□ -1.23
SNF7YLR025W MAS1P10507 462 aa7.35□□□□□ -1.23
SNF7YLR025W ABF1P14164 731 aa7.35□□□□□ -1.23
SNF7YLR025W TAL1P15019 335 aaKnown RBP7.35□□□□□ -1.23
SNF7YLR025W YSP3P25036 478 aa7.35□□□□□ -1.23
SNF7YLR025W CCR4P31384 837 aaKnown RBP7.35□□□□□ -1.23
SNF7YLR025W VPH2P32341 215 aa7.35□□□□□ -1.23
SNF7YLR025W NGG1P32494 702 aa7.35□□□□□ -1.23
SNF7YLR025W BEM3P32873 1128 aa7.35□□□□□ -1.23
SNF7YLR025W ARN1P38731 627 aa7.35□□□□□ -1.23
SNF7YLR025W IAH1P41734 238 aa7.35□□□□□ -1.23
SNF7YLR025W VMA13P41807 478 aaKnown RBP7.35□□□□□ -1.23
SNF7YLR025W YRB1P41920 201 aaKnown RBP7.35□□□□□ -1.23
SNF7YLR025W RSC8P43609 557 aaKnown RBP7.35□□□□□ -1.23
SNF7YLR025W DLD2P46681 530 aaKnown RBP7.35□□□□□ -1.23
SNF7YLR025W PRP24P49960 444 aaKnown RBP7.35□□□□□ -1.23
SNF7YLR025W YGL108CP53139 140 aa7.35□□□□□ -1.23
SNF7YLR025W GTR2P53290 341 aa7.35□□□□□ -1.23
SNF7YLR025W RMI1Q02685 241 aa7.35□□□□□ -1.23
SNF7YLR025W TAF12Q03761 539 aa7.35□□□□□ -1.23
SNF7YLR025W SLD7Q08457 257 aa7.35□□□□□ -1.23
SNF7YLR025W MCH5Q08777 521 aa7.35□□□□□ -1.23
SNF7YLR025W PUF2Q12221 1075 aaKnown RBP RIP-Chip data7.35□□□□□ -1.23 RIP-Chip
SNF7YLR025W UBX3Q12229 455 aa7.35□□□□□ -1.23
Retrieved 100 of 5,963 RNA–protein pairs in 36.5 ms