RNA–Protein interactions for RNA: YKR040C

YKR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YKR040C, Length 504 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YKR040CYKR040C SSL1Q04673 461 aaPredicted RBP11.5□□□□□ -0.57
YKR040CYKR040C GRS2Q06817 618 aa11.5□□□□□ -0.57
YKR040CYKR040C LRG1P35688 1017 aa11.49□□□□□ -0.57
YKR040CYKR040C PIM1P36775 1133 aa11.49□□□□□ -0.57
YKR040CYKR040C YHR020WP38708 688 aaKnown RBP11.49□□□□□ -0.57
YKR040CYKR040C YAL037WP39728 267 aa11.49□□□□□ -0.57
YKR040CYKR040C SSP120P39931 234 aaKnown RBP11.49□□□□□ -0.57
YKR040CYKR040C SEC28P40509 296 aaKnown RBP11.49□□□□□ -0.57
YKR040CYKR040C TY4A-JP47023 414 aa11.49□□□□□ -0.57
YKR040CYKR040C BOL2P53082 120 aa11.49□□□□□ -0.57
YKR040CYKR040C ADE12P80210 433 aaKnown RBP11.49□□□□□ -0.57
YKR040CYKR040C YLR456WQ06199 204 aa11.49□□□□□ -0.57
YKR040CYKR040C YLR177WQ06251 628 aa11.49□□□□□ -0.57
YKR040CYKR040C CRN1Q06440 651 aa11.49□□□□□ -0.57
YKR040CYKR040C ICT1Q12385 394 aa11.49□□□□□ -0.57
YKR040CYKR040C NHA1Q99271 985 aa11.49□□□□□ -0.57
YKR040CYKR040C SEC53P07283 254 aaKnown RBP11.48□□□□□ -0.57
YKR040CYKR040C ILV2P07342 687 aaKnown RBP11.48□□□□□ -0.57
YKR040CYKR040C SWI5P08153 709 aa11.48□□□□□ -0.57
YKR040CYKR040C SSC1P0CS90 654 aaKnown RBP11.48□□□□□ -0.57
YKR040CYKR040C TRX2P22803 104 aaKnown RBP11.48□□□□□ -0.57
YKR040CYKR040C CYM1P32898 989 aa11.48□□□□□ -0.57
YKR040CYKR040C YPT52P36018 234 aaKnown RBP11.48□□□□□ -0.57
YKR040CYKR040C REV7P38927 245 aa11.48□□□□□ -0.57
YKR040CYKR040C GIM4P40005 111 aaKnown RBP11.48□□□□□ -0.57
YKR040CYKR040C UPC2Q12151 913 aa11.48□□□□□ -0.57
YKR040CYKR040C YMR030W-AQ3E760 96 aa11.48□□□□□ -0.57
YKR040CYKR040C ATP11P32453 318 aa11.47□□□□□ -0.57
YKR040CYKR040C EFM1P38732 585 aa11.47□□□□□ -0.57
YKR040CYKR040C OCA5P38738 679 aa11.47□□□□□ -0.57
YKR040CYKR040C YHR182WP38870 785 aa11.47□□□□□ -0.57
YKR040CYKR040C MPT5P39016 859 aaKnown RBP RIP-Chip data11.47□□□□□ -0.57not detected
YKR040CYKR040C SSU1P41930 458 aa11.47□□□□□ -0.57
YKR040CYKR040C DUG1P43616 481 aaKnown RBP11.47□□□□□ -0.57
YKR040CYKR040C YAT1P80235 687 aa11.47□□□□□ -0.57
YKR040CYKR040C ECM9Q02202 377 aa11.47□□□□□ -0.57
YKR040CYKR040C EGD1Q02642 157 aaKnown RBP11.47□□□□□ -0.57
YKR040CYKR040C UBX3Q12229 455 aa11.47□□□□□ -0.57
YKR040CYKR040C KCS1Q12494 1050 aa11.47□□□□□ -0.57
YKR040CYKR040C RGS2Q99188 309 aa11.47□□□□□ -0.57
YKR040CYKR040C PHO5P00635 467 aa11.46□□□□□ -0.57
YKR040CYKR040C ARG4P04076 463 aaPredicted RBP11.46□□□□□ -0.57
YKR040CYKR040C FUM1P08417 488 aaKnown RBP11.46□□□□□ -0.57
YKR040CYKR040C AMD2P22580 549 aa11.46□□□□□ -0.57
YKR040CYKR040C ILV6P25605 309 aaKnown RBP11.46□□□□□ -0.57
YKR040CYKR040C HSE1P38753 452 aa11.46□□□□□ -0.57
YKR040CYKR040C CEM1P39525 442 aa11.46□□□□□ -0.57
YKR040CYKR040C UTP18P40362 594 aaPredicted RBP11.46□□□□□ -0.57
YKR040CYKR040C GAT1P43574 510 aa11.46□□□□□ -0.57
YKR040CYKR040C CLD1P53264 445 aa11.46□□□□□ -0.57
YKR040CYKR040C USA1Q03714 838 aa11.46□□□□□ -0.57
YKR040CYKR040C STE23Q06010 1027 aa11.46□□□□□ -0.57
YKR040CYKR040C VHS3Q08438 674 aa11.46□□□□□ -0.57
YKR040CYKR040C YAR066WP0CX18 203 aa11.45□□□□□ -0.58
YKR040CYKR040C YHR214WP0CX19 203 aa11.45□□□□□ -0.58
YKR040CYKR040C RRP14P36080 434 aaKnown RBP11.45□□□□□ -0.58
YKR040CYKR040C YHR045WP38775 560 aa11.45□□□□□ -0.58
YKR040CYKR040C YJL206CP39529 758 aa11.45□□□□□ -0.58
YKR040CYKR040C MEP1P40260 492 aa11.45□□□□□ -0.58
YKR040CYKR040C PEP8P40335 379 aa11.45□□□□□ -0.58
YKR040CYKR040C LSC1P53598 329 aaKnown RBP11.45□□□□□ -0.58
YKR040CYKR040C BIO4P53630 237 aa11.45□□□□□ -0.58
YKR040CYKR040C HST3P53687 447 aa11.45□□□□□ -0.58
YKR040CYKR040C NHP10Q03435 203 aa11.45□□□□□ -0.58
YKR040CYKR040C HPT1Q04178 221 aaKnown RBP11.45□□□□□ -0.58
YKR040CYKR040C TRM12Q04235 462 aa11.45□□□□□ -0.58
YKR040CYKR040C PFA4Q12006 378 aa11.45□□□□□ -0.58
YKR040CYKR040C SLP1Q12232 587 aa11.45□□□□□ -0.58
YKR040CYKR040C GCY1P14065 312 aaKnown RBP RIP-Chip data11.44□□□□□ -0.58not detected
YKR040CYKR040C DEF1P35732 738 aaKnown RBP11.44□□□□□ -0.58
YKR040CYKR040C MRPL37P36532 105 aa11.44□□□□□ -0.58
YKR040CYKR040C MUP3P38734 546 aa11.44□□□□□ -0.58
YKR040CYKR040C PFA3P42836 336 aa11.44□□□□□ -0.58
YKR040CYKR040C HXT16P47185 567 aa11.44□□□□□ -0.58
YKR040CYKR040C HXT15P54854 567 aa11.44□□□□□ -0.58
YKR040CYKR040C NAM8Q00539 523 aaKnown RBP11.44□□□□□ -0.58
YKR040CYKR040C YMR209CQ03648 457 aa11.44□□□□□ -0.58
YKR040CYKR040C CSN9Q03981 162 aa11.44□□□□□ -0.58
YKR040CYKR040C TAF11Q04226 346 aa11.44□□□□□ -0.58
YKR040CYKR040C SPO20Q04359 397 aa11.44□□□□□ -0.58
YKR040CYKR040C CHS5Q12114 671 aaKnown RBP11.44□□□□□ -0.58
YKR040CYKR040C RPB4P20433 221 aaPredicted RBP11.43□□□□□ -0.58
YKR040CYKR040C CWP1P28319 239 aa11.43□□□□□ -0.58
YKR040CYKR040C PTM1P32857 523 aa11.43□□□□□ -0.58
YKR040CYKR040C SPF1P39986 1215 aaKnown RBP11.43□□□□□ -0.58
YKR040CYKR040C NRM1P53718 249 aa11.43□□□□□ -0.58
YKR040CYKR040C ROT1Q03691 256 aa11.43□□□□□ -0.58
YKR040CYKR040C TAF12Q03761 539 aa11.43□□□□□ -0.58
YKR040CYKR040C HSH49Q99181 213 aaPredicted RBP11.43□□□□□ -0.58
YKR040CYKR040C MDM35O60200 86 aa11.42□□□□□ -0.58
YKR040CYKR040C COX6P00427 148 aa11.42□□□□□ -0.58
YKR040CYKR040C CLB1P24868 471 aa11.42□□□□□ -0.58
YKR040CYKR040C SET3P36124 751 aa11.42□□□□□ -0.58
YKR040CYKR040C ARA1P38115 344 aa11.42□□□□□ -0.58
YKR040CYKR040C GIC1P38785 314 aa11.42□□□□□ -0.58
YKR040CYKR040C TFG1P41895 735 aaPredicted RBP11.42□□□□□ -0.58
YKR040CYKR040C GOT1Q03554 138 aa11.42□□□□□ -0.58
YKR040CYKR040C UTP13Q05946 817 aaKnown RBP11.42□□□□□ -0.58
YKR040CYKR040C YLR053CQ12026 108 aa11.42□□□□□ -0.58
YKR040CYKR040C MDY2Q12285 212 aa11.42□□□□□ -0.58
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms