RNA–Protein interactions for RNA: YKL130C

SHE2, Transcript of RNA-binding protein that binds specific mRNAs and interacts with She3p, yeastyeast

Gene SHE2, Length 741 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE2YKL130C TPA1P40032 644 aaKnown RBP2.41□□□□□ -2.02
SHE2YKL130C GPD2P41911 440 aaKnown RBP2.41□□□□□ -2.02
SHE2YKL130C YJL107CP42947 387 aa2.41□□□□□ -2.02
SHE2YKL130C MRX6P48564 524 aa2.41□□□□□ -2.02
SHE2YKL130C ORC5P50874 479 aa2.41□□□□□ -2.02
SHE2YKL130C YGR079WP53249 370 aa2.41□□□□□ -2.02
SHE2YKL130C INN1P53901 409 aa2.41□□□□□ -2.02
SHE2YKL130C DIG1Q03063 452 aaKnown RBP2.41□□□□□ -2.02
SHE2YKL130C RTT103Q05543 409 aa2.41□□□□□ -2.02
SHE2YKL130C SKG3Q06315 1026 aa2.41□□□□□ -2.02
SHE2YKL130C YDL242WQ07746 117 aa2.41□□□□□ -2.02
SHE2YKL130C RIX7Q07844 837 aaKnown RBP2.41□□□□□ -2.02
SHE2YKL130C GRC3Q07845 632 aa2.41□□□□□ -2.02
SHE2YKL130C GSH2Q08220 491 aa2.41□□□□□ -2.02
SHE2YKL130C YOR019WQ99248 730 aa2.41□□□□□ -2.02
SHE2YKL130C COX1P00401 534 aa2.4□□□□□ -2.03
SHE2YKL130C MET17P06106 444 aa2.4□□□□□ -2.03
SHE2YKL130C RPL42AP0CX27 106 aaKnown RBP2.4□□□□□ -2.03
SHE2YKL130C RPL42BP0CX28 106 aaKnown RBP2.4□□□□□ -2.03
SHE2YKL130C YFL068WP0CX99 160 aa2.4□□□□□ -2.03
SHE2YKL130C YLL066W-AP0CY00 160 aa2.4□□□□□ -2.03
SHE2YKL130C YLL067W-AP0CY01 160 aa2.4□□□□□ -2.03
SHE2YKL130C CBS1P14066 229 aa2.4□□□□□ -2.03
SHE2YKL130C ROX1P25042 368 aa2.4□□□□□ -2.03
SHE2YKL130C RFA2P26754 273 aaKnown RBP2.4□□□□□ -2.03
SHE2YKL130C VMA8P32610 256 aaKnown RBP2.4□□□□□ -2.03
SHE2YKL130C BYE1P36106 594 aa2.4□□□□□ -2.03
SHE2YKL130C AUR1P36107 401 aaPredicted RBP2.4□□□□□ -2.03
SHE2YKL130C YNG2P38806 282 aaKnown RBP2.4□□□□□ -2.03
SHE2YKL130C RGI2P40188 164 aa2.4□□□□□ -2.03
SHE2YKL130C SPO22P40511 975 aa2.4□□□□□ -2.03
SHE2YKL130C AXL1P40851 1208 aa2.4□□□□□ -2.03
SHE2YKL130C MSY1P48527 492 aa2.4□□□□□ -2.03
SHE2YKL130C DSD1P53095 428 aa2.4□□□□□ -2.03
SHE2YKL130C HOS2P53096 452 aaPredicted RBP2.4□□□□□ -2.03
SHE2YKL130C YGR066CP53242 292 aa2.4□□□□□ -2.03
SHE2YKL130C YNR061CP53747 219 aa2.4□□□□□ -2.03
SHE2YKL130C YAT1P80235 687 aa2.4□□□□□ -2.03
SHE2YKL130C BET4Q00618 327 aa2.4□□□□□ -2.03
SHE2YKL130C INA17Q02888 182 aa2.4□□□□□ -2.03
SHE2YKL130C SXM1Q04175 944 aaKnown RBP2.4□□□□□ -2.03
SHE2YKL130C YDR109CQ04585 715 aa2.4□□□□□ -2.03
SHE2YKL130C CRN1Q06440 651 aa2.4□□□□□ -2.03
SHE2YKL130C YLR352WQ06479 807 aa2.4□□□□□ -2.03
SHE2YKL130C PSR1Q07800 427 aa2.4□□□□□ -2.03
SHE2YKL130C YPL191CQ08930 360 aa2.4□□□□□ -2.03
SHE2YKL130C YJR112W-AQ3E743 109 aa2.4□□□□□ -2.03
SHE2YKL130C YMR230W-AQ3E7B5 62 aa2.4□□□□□ -2.03
SHE2YKL130C ILV2P07342 687 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C HOM3P10869 527 aa2.39□□□□□ -2.03
SHE2YKL130C PDX1P16451 410 aa2.39□□□□□ -2.03
SHE2YKL130C PWP1P21304 576 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C POL4P25615 582 aa2.39□□□□□ -2.03
SHE2YKL130C CDC60P26637 1090 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C LAC1P28496 418 aa2.39□□□□□ -2.03
SHE2YKL130C DBF4P32325 704 aa2.39□□□□□ -2.03
SHE2YKL130C MSS51P32335 436 aa2.39□□□□□ -2.03
SHE2YKL130C ERG3P32353 365 aa2.39□□□□□ -2.03
SHE2YKL130C PDB1P32473 366 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C YOX1P34161 385 aa2.39□□□□□ -2.03
SHE2YKL130C AAP1P37898 856 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C REG2P38232 338 aa2.39□□□□□ -2.03
SHE2YKL130C VBA2P38358 474 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C ERC1P38767 581 aa2.39□□□□□ -2.03
SHE2YKL130C SEC31P38968 1273 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C PHM8P40025 321 aa2.39□□□□□ -2.03
SHE2YKL130C MRX1P40050 688 aa2.39□□□□□ -2.03
SHE2YKL130C SEC24P40482 926 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C RPN11P43588 306 aaKnown RBP2.39□□□□□ -2.03
SHE2YKL130C NPA3P47122 385 aa2.39□□□□□ -2.03
SHE2YKL130C YML6P51998 286 aa2.39□□□□□ -2.03
SHE2YKL130C RSC1P53236 928 aa2.39□□□□□ -2.03
SHE2YKL130C NGL3Q03210 505 aa2.39□□□□□ -2.03
SHE2YKL130C RCF1Q03713 159 aa2.39□□□□□ -2.03
SHE2YKL130C YMR155WQ03795 547 aa2.39□□□□□ -2.03
SHE2YKL130C SWA2Q06677 668 aa2.39□□□□□ -2.03
SHE2YKL130C YEH1Q07804 573 aa2.39□□□□□ -2.03
SHE2YKL130C SNU66Q12420 587 aaPredicted RBP2.39□□□□□ -2.03
SHE2YKL130C RTN2Q12443 393 aa2.39□□□□□ -2.03
SHE2YKL130C SMC6Q12749 1114 aa2.39□□□□□ -2.03
SHE2YKL130C HSP82P02829 709 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C HXK2P04807 486 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C SES1P07284 462 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C DFR1P07807 211 aaKnown RBP RIP-Chip data2.38□□□□□ -2.03not detected
SHE2YKL130C KAR3P17119 729 aa2.38□□□□□ -2.03
SHE2YKL130C VMA16P23968 213 aa2.38□□□□□ -2.03
SHE2YKL130C YSP3P25036 478 aa2.38□□□□□ -2.03
SHE2YKL130C RPC53P25441 422 aa2.38□□□□□ -2.03
SHE2YKL130C YIH1P25637 258 aa2.38□□□□□ -2.03
SHE2YKL130C SWI3P32591 825 aa2.38□□□□□ -2.03
SHE2YKL130C SOF1P33750 489 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C LHS1P36016 881 aa2.38□□□□□ -2.03
SHE2YKL130C UBP11P36026 717 aa2.38□□□□□ -2.03
SHE2YKL130C NTR2P36118 322 aaPredicted RBP2.38□□□□□ -2.03
SHE2YKL130C UBP13P38187 747 aa2.38□□□□□ -2.03
SHE2YKL130C SRP72P38688 640 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C DED81P38707 554 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C ARN1P38731 627 aa2.38□□□□□ -2.03
SHE2YKL130C LSM5P40089 93 aaKnown RBP2.38□□□□□ -2.03
SHE2YKL130C ASG1P40467 964 aa2.38□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 21.6 ms