RNA–Protein interactions for RNA: YKL119C

VPH2, Transcript of Integral membrane protein required for V-ATPase function, yeast

Gene VPH2, Length 648 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VPH2	YKL119C	SXM1	Q04175	944 aa	Known RBP	2.76	□□□□□ -1.97
VPH2	YKL119C	GRC3	Q07845	632 aa		2.76	□□□□□ -1.97
VPH2	YKL119C	ENT1	Q12518	454 aa		2.76	□□□□□ -1.97
VPH2	YKL119C	CSR2	Q12734	1121 aa		2.76	□□□□□ -1.97
VPH2	YKL119C	SLC1	P33333	303 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	PEX5	P35056	612 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	NUP120	P35729	1037 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	NTR2	P36118	322 aa	Predicted RBP	2.75	□□□□□ -1.97
VPH2	YKL119C	AVT5	P38176	459 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	RFC1	P38630	861 aa	Known RBP	2.75	□□□□□ -1.97
VPH2	YKL119C	RTS1	P38903	757 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	NOP16	P40007	231 aa	Known RBP	2.75	□□□□□ -1.97
VPH2	YKL119C	GUF1	P46943	645 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	SHE10	P53075	577 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	BOR1	P53838	576 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	MOT3	P54785	490 aa	Known RBP	2.75	□□□□□ -1.97
VPH2	YKL119C	MRPL13	Q02204	264 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	HCR1	Q05775	265 aa	Known RBP	2.75	□□□□□ -1.97
VPH2	YKL119C	STP3	Q05937	343 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	CRN1	Q06440	651 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	HIF1	Q12373	385 aa		2.75	□□□□□ -1.97
VPH2	YKL119C	NUC1	P08466	329 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	REV1	P12689	985 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	CMK1	P27466	446 aa	Known RBP	2.74	□□□□□ -1.97
VPH2	YKL119C	PXA2	P34230	853 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	YKL050C	P35736	922 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	STV1	P37296	890 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	ERG7	P38604	731 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	ECM10	P39987	644 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	YJL068C	P40363	299 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	MKT1	P40850	830 aa	Known RBP	2.74	□□□□□ -1.97
VPH2	YKL119C	AZF1	P41696	914 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	SGM1	P47166	707 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	YTP1	P53584	459 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	RSM28	Q03430	361 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	CIA1	Q05583	330 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	IMH1	Q06704	911 aa	Known RBP	2.74	□□□□□ -1.97
VPH2	YKL119C	SDH5	Q08230	162 aa		2.74	□□□□□ -1.97
VPH2	YKL119C	MRS3	P10566	314 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	MTF2	P10849	440 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	CDC60	P26637	1090 aa	Known RBP	2.73	□□□□□ -1.97
VPH2	YKL119C	PAH1	P32567	862 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	LOS1	P33418	1100 aa	Predicted RBP	2.73	□□□□□ -1.97
VPH2	YKL119C	MIA40	P36046	403 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	SPC34	P36131	295 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	UME6	P39001	836 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	SPC72	P39723	622 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	BNA1	P47096	177 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	RBG2	P53295	368 aa	Known RBP	2.73	□□□□□ -1.97
VPH2	YKL119C	CSL4	P53859	292 aa	Predicted RBP	2.73	□□□□□ -1.97
VPH2	YKL119C	YLR287C	Q05881	355 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	CSR1	Q06705	408 aa	Known RBP	2.73	□□□□□ -1.97
VPH2	YKL119C	YDL218W	Q07629	317 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	YEH2	Q07950	538 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	SCM3	Q12334	223 aa		2.73	□□□□□ -1.97
VPH2	YKL119C	ATP2	P00830	511 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	HOM3	P10869	527 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	PFK2	P16862	959 aa	Known RBP RIP-Chip data	2.72	□□□□□ -1.97	not detected
VPH2	YKL119C	FUR1	P18562	216 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	UBC1	P21734	215 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	YCL049C	P25577	312 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	PGS1	P25578	521 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	ERG1	P32476	496 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	VMA8	P32610	256 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	TIF3	P34167	436 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	MUD2	P36084	527 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	MRPL36	P36531	177 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	RRP3	P38712	501 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	NPR3	P38742	1146 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	PSF2	P40359	213 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	SWP82	P43554	623 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	YPI1	P43587	155 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	YGL242C	P53066	181 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	RSC1	P53236	928 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	ARC35	P53731	342 aa	Known RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	IST1	P53843	298 aa	Predicted RBP	2.72	□□□□□ -1.97
VPH2	YKL119C	CBK1	P53894	756 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	NUP100	Q02629	959 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	RPM2	Q02773	1202 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	RCF1	Q03713	159 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	ARP6	Q12509	438 aa		2.72	□□□□□ -1.97
VPH2	YKL119C	HSP82	P02829	709 aa	Known RBP	2.71	□□□□□ -1.98
VPH2	YKL119C	SNF1	P06782	633 aa	Known RBP	2.71	□□□□□ -1.98
VPH2	YKL119C	NCP1	P16603	691 aa	Known RBP	2.71	□□□□□ -1.98
VPH2	YKL119C	AAC3	P18238	307 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	CLB4	P24871	460 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	SRB5	P32585	307 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	MUM2	P38236	366 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	YBR138C	P38277	524 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	YBP1	P38315	674 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	FAA2	P39518	744 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	YEL068C	P39977	110 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	PUG1	P40100	303 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	GPD2	P41911	440 aa	Known RBP	2.71	□□□□□ -1.98
VPH2	YKL119C	YJL132W	P47014	750 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	SMC3	P47037	1230 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	UPF3	P48412	387 aa	Known RBP	2.71	□□□□□ -1.98
VPH2	YKL119C	YDL186W	P48568	277 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	ASE1	P50275	885 aa		2.71	□□□□□ -1.98
VPH2	YKL119C	MRPL19	P53875	158 aa		2.71	□□□□□ -1.98

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms