RNA–Protein interactions for RNA: YKL042W

SPC42, Transcript of Central plaque component of spindle pole body (SPB), yeastyeast

Gene SPC42, Length 1,092 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC42YKL042W ILS1P09436 1072 aaKnown RBP5.49□□□□□ -1.53
SPC42YKL042W HOM3P10869 527 aa5.49□□□□□ -1.53
SPC42YKL042W DBF4P32325 704 aa5.49□□□□□ -1.53
SPC42YKL042W TCD2P36101 447 aaKnown RBP5.49□□□□□ -1.53
SPC42YKL042W ELO1P39540 310 aa5.49□□□□□ -1.53
SPC42YKL042W ALG5P40350 334 aa5.49□□□□□ -1.53
SPC42YKL042W CDC1P40986 491 aa5.49□□□□□ -1.53
SPC42YKL042W CIN1P40987 1014 aa5.49□□□□□ -1.53
SPC42YKL042W ORC5P50874 479 aa5.49□□□□□ -1.53
SPC42YKL042W SNU56Q03782 492 aaKnown RBP5.49□□□□□ -1.53
SPC42YKL042W YLR455WQ06188 304 aa5.49□□□□□ -1.53
SPC42YKL042W BSP1Q06604 576 aa5.49□□□□□ -1.53
SPC42YKL042W YOL159CQ08300 171 aa5.49□□□□□ -1.53
SPC42YKL042W APL4Q12028 832 aa5.49□□□□□ -1.53
SPC42YKL042W SGS1P35187 1447 aa5.48□□□□□ -1.53
SPC42YKL042W KGD1P20967 1014 aaKnown RBP5.48□□□□□ -1.53
SPC42YKL042W YCR006CP25350 157 aa5.48□□□□□ -1.53
SPC42YKL042W IMG1P25626 169 aa5.48□□□□□ -1.53
SPC42YKL042W YBR144CP34215 104 aa5.48□□□□□ -1.53
SPC42YKL042W CST26P38226 397 aa5.48□□□□□ -1.53
SPC42YKL042W TAX4P47030 604 aa5.48□□□□□ -1.53
SPC42YKL042W IMD4P50094 524 aaKnown RBP5.48□□□□□ -1.53
SPC42YKL042W IPI3P53877 555 aa5.48□□□□□ -1.53
SPC42YKL042W BOP3P53958 396 aa5.48□□□□□ -1.53
SPC42YKL042W YDR239CQ03780 787 aa5.48□□□□□ -1.53
SPC42YKL042W ATG29Q12092 213 aa5.48□□□□□ -1.53
SPC42YKL042W SNU66Q12420 587 aaPredicted RBP5.48□□□□□ -1.53
SPC42YKL042W CHO1P08456 276 aa5.47□□□□□ -1.53
SPC42YKL042W PDA1P16387 420 aaKnown RBP5.47□□□□□ -1.53
SPC42YKL042W CLB3P24870 427 aa5.47□□□□□ -1.53
SPC42YKL042W PUP3P25451 205 aaKnown RBP5.47□□□□□ -1.53
SPC42YKL042W PPZ2P33329 710 aa5.47□□□□□ -1.53
SPC42YKL042W TIF3P34167 436 aaKnown RBP5.47□□□□□ -1.53
SPC42YKL042W HOT13P36078 116 aa5.47□□□□□ -1.53
SPC42YKL042W SRP72P38688 640 aaKnown RBP5.47□□□□□ -1.53
SPC42YKL042W PTR3P43606 678 aa5.47□□□□□ -1.53
SPC42YKL042W PET130P47065 347 aa5.47□□□□□ -1.53
SPC42YKL042W YMR178WQ03219 274 aaKnown RBP5.47□□□□□ -1.53
SPC42YKL042W MRD1Q06106 887 aaKnown RBP5.47□□□□□ -1.53
SPC42YKL042W TPO3Q06451 622 aa5.47□□□□□ -1.53
SPC42YKL042W MCH4Q08268 501 aa5.47□□□□□ -1.53
SPC42YKL042W RLM1Q12224 676 aa5.47□□□□□ -1.53
SPC42YKL042W YLR111WQ12528 110 aa5.47□□□□□ -1.53
SPC42YKL042W YOL159C-AQ3E769 90 aa5.47□□□□□ -1.53
SPC42YKL042W GPA1P08539 472 aa5.46□□□□□ -1.54
SPC42YKL042W TKL1P23254 680 aaKnown RBP5.46□□□□□ -1.54
SPC42YKL042W SYN8P31377 255 aa5.46□□□□□ -1.54
SPC42YKL042W SAC1P32368 623 aaKnown RBP5.46□□□□□ -1.54
SPC42YKL042W WBP1P33767 430 aaKnown RBP5.46□□□□□ -1.54
SPC42YKL042W PEX5P35056 612 aa5.46□□□□□ -1.54
SPC42YKL042W BLI1P35727 113 aa5.46□□□□□ -1.54
SPC42YKL042W OCT1P35999 772 aa5.46□□□□□ -1.54
SPC42YKL042W PDR8Q06149 701 aa5.46□□□□□ -1.54
SPC42YKL042W RTT109Q07794 436 aa5.46□□□□□ -1.54
SPC42YKL042W GRC3Q07845 632 aa5.46□□□□□ -1.54
SPC42YKL042W TEN1Q07921 160 aa5.46□□□□□ -1.54
SPC42YKL042W SMC6Q12749 1114 aa5.46□□□□□ -1.54
SPC42YKL042W YER145C-AA0A023PYF4 145 aa5.45□□□□□ -1.54
SPC42YKL042W MRP13P12686 339 aa5.45□□□□□ -1.54
SPC42YKL042W SAS3P34218 831 aa5.45□□□□□ -1.54
SPC42YKL042W PXL1P36166 706 aa5.45□□□□□ -1.54
SPC42YKL042W ICS2P38284 255 aa5.45□□□□□ -1.54
SPC42YKL042W TSC10P38342 320 aa5.45□□□□□ -1.54
SPC42YKL042W DBP8P38719 431 aa5.45□□□□□ -1.54
SPC42YKL042W BPL1P48445 690 aaPredicted RBP5.45□□□□□ -1.54
SPC42YKL042W APT1P49435 187 aaKnown RBP5.45□□□□□ -1.54
SPC42YKL042W HOS2P53096 452 aaPredicted RBP5.45□□□□□ -1.54
SPC42YKL042W TWF1P53250 332 aa5.45□□□□□ -1.54
SPC42YKL042W ATP23P53722 227 aa5.45□□□□□ -1.54
SPC42YKL042W FIN1Q03898 291 aa5.45□□□□□ -1.54
SPC42YKL042W RPC11Q04307 110 aaPredicted RBP5.45□□□□□ -1.54
SPC42YKL042W ART10P18634 518 aaKnown RBP5.44□□□□□ -1.54
SPC42YKL042W APN1P22936 367 aa5.44□□□□□ -1.54
SPC42YKL042W STE50P25344 346 aa5.44□□□□□ -1.54
SPC42YKL042W BOS1P25385 244 aa5.44□□□□□ -1.54
SPC42YKL042W MRE11P32829 692 aa5.44□□□□□ -1.54
SPC42YKL042W YBL055CP34220 418 aaPredicted RBP5.44□□□□□ -1.54
SPC42YKL042W CMC1P36064 111 aa5.44□□□□□ -1.54
SPC42YKL042W ARN1P38731 627 aa5.44□□□□□ -1.54
SPC42YKL042W OTU2P38747 307 aaKnown RBP5.44□□□□□ -1.54
SPC42YKL042W YTP1P53584 459 aa5.44□□□□□ -1.54
SPC42YKL042W RMT2Q03305 412 aa5.44□□□□□ -1.54
SPC42YKL042W EMI2Q04409 500 aaKnown RBP5.44□□□□□ -1.54
SPC42YKL042W ECM22Q05958 814 aaPredicted RBP5.44□□□□□ -1.54
SPC42YKL042W YLR352WQ06479 807 aa5.44□□□□□ -1.54
SPC42YKL042W ETT1Q08421 412 aaKnown RBP5.44□□□□□ -1.54
SPC42YKL042W ISA2Q12425 185 aa5.44□□□□□ -1.54
SPC42YKL042W ILV6P25605 309 aaKnown RBP5.43□□□□□ -1.54
SPC42YKL042W NUP133P36161 1157 aa5.43□□□□□ -1.54
SPC42YKL042W ANS1P38832 159 aa5.43□□□□□ -1.54
SPC42YKL042W RIX1P38883 763 aaPredicted RBP5.43□□□□□ -1.54
SPC42YKL042W YJL068CP40363 299 aa5.43□□□□□ -1.54
SPC42YKL042W SSU1P41930 458 aa5.43□□□□□ -1.54
SPC42YKL042W YJL107CP42947 387 aa5.43□□□□□ -1.54
SPC42YKL042W YML6P51998 286 aa5.43□□□□□ -1.54
SPC42YKL042W ERG26P53199 349 aaKnown RBP5.43□□□□□ -1.54
SPC42YKL042W YDR131CQ03899 556 aa5.43□□□□□ -1.54
SPC42YKL042W RQC1Q05468 723 aaKnown RBP5.43□□□□□ -1.54
SPC42YKL042W ECM30Q06673 1274 aa5.43□□□□□ -1.54
SPC42YKL042W IRC3Q06683 689 aa5.43□□□□□ -1.54
Retrieved 100 of 5,963 RNA–protein pairs in 35.2 ms