RNA–Protein interactions for RNA: YKL012W

PRP40, Transcript of U1 snRNP protein involved in splicing, yeastyeast

Gene PRP40, Length 1,752 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRP40YKL012W YBR144CP34215 104 aa5.83□□□□□ -1.48
PRP40YKL012W MOH1P38191 138 aa5.83□□□□□ -1.48
PRP40YKL012W ELO1P39540 310 aa5.83□□□□□ -1.48
PRP40YKL012W IMD4P50094 524 aaKnown RBP5.83□□□□□ -1.48
PRP40YKL012W GND2P53319 492 aa5.83□□□□□ -1.48
PRP40YKL012W YPR003CP53394 754 aa5.83□□□□□ -1.48
PRP40YKL012W ERB1Q04660 807 aaKnown RBP5.83□□□□□ -1.48
PRP40YKL012W ARO10Q06408 635 aa5.83□□□□□ -1.48
PRP40YKL012W RLM1Q12224 676 aa5.83□□□□□ -1.48
PRP40YKL012W PUP3P25451 205 aaKnown RBP5.83□□□□□ -1.48
PRP40YKL012W STB6P36085 766 aa5.83□□□□□ -1.48
PRP40YKL012W SMC3P47037 1230 aa5.83□□□□□ -1.48
PRP40YKL012W ULA1Q12059 462 aa5.83□□□□□ -1.48
PRP40YKL012W LEU9Q12166 604 aaKnown RBP5.83□□□□□ -1.48
PRP40YKL012W HEM1P09950 548 aaPredicted RBP5.82□□□□□ -1.48
PRP40YKL012W SEC66P33754 206 aa5.82□□□□□ -1.48
PRP40YKL012W PMT1P33775 817 aa5.82□□□□□ -1.48
PRP40YKL012W OAR1P35731 278 aa5.82□□□□□ -1.48
PRP40YKL012W JEM1P40358 645 aa5.82□□□□□ -1.48
PRP40YKL012W SAE2P46946 345 aa5.82□□□□□ -1.48
PRP40YKL012W APT1P49435 187 aaKnown RBP5.82□□□□□ -1.48
PRP40YKL012W YGR127WP53275 312 aa5.82□□□□□ -1.48
PRP40YKL012W TMN2Q04562 672 aa5.82□□□□□ -1.48
PRP40YKL012W DPB4Q04603 196 aaKnown RBP5.82□□□□□ -1.48
PRP40YKL012W YRF1-4O13559 1382 aa5.81□□□□□ -1.48
PRP40YKL012W RPN13O13563 156 aa5.81□□□□□ -1.48
PRP40YKL012W MRP2P10663 115 aaPredicted RBP5.81□□□□□ -1.48
PRP40YKL012W SPE2P21182 396 aa5.81□□□□□ -1.48
PRP40YKL012W PRD1P25375 712 aa5.81□□□□□ -1.48
PRP40YKL012W YMC1P32331 307 aa5.81□□□□□ -1.48
PRP40YKL012W RPC34P32910 317 aa5.81□□□□□ -1.48
PRP40YKL012W HOS2P53096 452 aaPredicted RBP5.81□□□□□ -1.48
PRP40YKL012W IPI3P53877 555 aa5.81□□□□□ -1.48
PRP40YKL012W CTF4Q01454 927 aa5.81□□□□□ -1.48
PRP40YKL012W CIK1Q01649 594 aa5.81□□□□□ -1.48
PRP40YKL012W THI3Q07471 609 aa5.81□□□□□ -1.48
PRP40YKL012W RTT109Q07794 436 aa5.81□□□□□ -1.48
PRP40YKL012W YOL159CQ08300 171 aa5.81□□□□□ -1.48
PRP40YKL012W MRP13P12686 339 aa5.8□□□□□ -1.48
PRP40YKL012W MAK32P23060 363 aa5.8□□□□□ -1.48
PRP40YKL012W STE50P25344 346 aa5.8□□□□□ -1.48
PRP40YKL012W YCR051WP25631 222 aa5.8□□□□□ -1.48
PRP40YKL012W MRK1P50873 501 aa5.8□□□□□ -1.48
PRP40YKL012W SLI1P53304 468 aa5.8□□□□□ -1.48
PRP40YKL012W BNI5P53890 448 aaKnown RBP5.8□□□□□ -1.48
PRP40YKL012W RPA49Q01080 415 aaPredicted RBP5.8□□□□□ -1.48
PRP40YKL012W SEC39Q12745 709 aa5.8□□□□□ -1.48
PRP40YKL012W REC107P21651 314 aa5.8□□□□□ -1.48
PRP40YKL012W CLB1P24868 471 aa5.8□□□□□ -1.48
PRP40YKL012W IMG1P25626 169 aa5.8□□□□□ -1.48
PRP40YKL012W YEL020CP39994 560 aa5.8□□□□□ -1.48
PRP40YKL012W CDC1P40986 491 aa5.8□□□□□ -1.48
PRP40YKL012W HXT14P42833 540 aa5.8□□□□□ -1.48
PRP40YKL012W ETT1Q08421 412 aaKnown RBP5.8□□□□□ -1.48
PRP40YKL012W ISN1Q99312 450 aa5.8□□□□□ -1.48
PRP40YKL012W CHO1P08456 276 aa5.79□□□□□ -1.48
PRP40YKL012W AQY1P0CD91 305 aa5.79□□□□□ -1.48
PRP40YKL012W APE1P14904 514 aa5.79□□□□□ -1.48
PRP40YKL012W ART10P18634 518 aaKnown RBP5.79□□□□□ -1.48
PRP40YKL012W APN1P22936 367 aa5.79□□□□□ -1.48
PRP40YKL012W GSY2P27472 705 aa5.79□□□□□ -1.48
PRP40YKL012W VPH1P32563 840 aaKnown RBP5.79□□□□□ -1.48
PRP40YKL012W RFC1P38630 861 aaKnown RBP5.79□□□□□ -1.48
PRP40YKL012W IRC24P40580 263 aa5.79□□□□□ -1.48
PRP40YKL012W YJL043WP47053 257 aa5.79□□□□□ -1.48
PRP40YKL012W OGG1P53397 376 aaPredicted RBP5.79□□□□□ -1.48
PRP40YKL012W NRD1P53617 575 aaKnown RBP RIP-Chip data5.79□□□□□ -1.48not detected
PRP40YKL012W AIM32Q04689 311 aa5.79□□□□□ -1.48
PRP40YKL012W YOR389WQ08912 624 aa5.79□□□□□ -1.48
PRP40YKL012W BI2P03873 423 aa5.78□□□□□ -1.48
PRP40YKL012W ADE5,7P07244 802 aaKnown RBP5.78□□□□□ -1.48
PRP40YKL012W PAP1P29468 568 aaKnown RBP5.78□□□□□ -1.48
PRP40YKL012W NUP133P36161 1157 aa5.78□□□□□ -1.48
PRP40YKL012W TSC10P38342 320 aa5.78□□□□□ -1.48
PRP40YKL012W ARX1Q03862 593 aaKnown RBP5.78□□□□□ -1.48
PRP40YKL012W YLR455WQ06188 304 aa5.78□□□□□ -1.48
PRP40YKL012W APL4Q12028 832 aa5.78□□□□□ -1.48
PRP40YKL012W RAP1P11938 827 aa5.78□□□□□ -1.48
PRP40YKL012W KRS1P15180 591 aaKnown RBP5.78□□□□□ -1.48
PRP40YKL012W URA7P28274 579 aaKnown RBP5.78□□□□□ -1.48
PRP40YKL012W YBL055CP34220 418 aaPredicted RBP5.78□□□□□ -1.48
PRP40YKL012W FTH1P38310 465 aa5.78□□□□□ -1.48
PRP40YKL012W PTR3P43606 678 aa5.78□□□□□ -1.48
PRP40YKL012W ART5P53244 586 aaKnown RBP5.78□□□□□ -1.48
PRP40YKL012W YMR178WQ03219 274 aaKnown RBP5.78□□□□□ -1.48
PRP40YKL012W MSL5Q12186 476 aaKnown RBP RIP-Chip data5.78□□□□□ -1.48not detected
PRP40YKL012W SPA2P23201 1466 aaKnown RBP5.77□□□□□ -1.49
PRP40YKL012W CLC1P17891 233 aa5.77□□□□□ -1.49
PRP40YKL012W BOS1P25385 244 aa5.77□□□□□ -1.49
PRP40YKL012W BUD14P27637 709 aa5.77□□□□□ -1.49
PRP40YKL012W APE3P37302 537 aaKnown RBP5.77□□□□□ -1.49
PRP40YKL012W ICS2P38284 255 aa5.77□□□□□ -1.49
PRP40YKL012W ERV46P39727 415 aa5.77□□□□□ -1.49
PRP40YKL012W STB2P46679 850 aa5.77□□□□□ -1.49
PRP40YKL012W DLD2P46681 530 aaKnown RBP5.77□□□□□ -1.49
PRP40YKL012W PFA5Q03289 374 aa5.77□□□□□ -1.49
PRP40YKL012W ROY1Q04847 553 aa5.77□□□□□ -1.49
PRP40YKL012W VTA1Q06263 330 aa5.77□□□□□ -1.49
PRP40YKL012W TEN1Q07921 160 aa5.77□□□□□ -1.49
PRP40YKL012W RDL1Q12305 139 aaKnown RBP5.77□□□□□ -1.49
Retrieved 100 of 5,963 RNA–protein pairs in 16.8 ms