RNA–Protein interactions for RNA: YJR044C

VPS55, Transcript of Late endosomal protein involved in late endosome to vacuole transport, yeastyeast

Gene VPS55, Length 423 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS55YJR044C PUS4P48567 403 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C CTF18P49956 741 aa1.6□□□□□ -2.15
VPS55YJR044C COG1P53079 417 aa1.6□□□□□ -2.15
VPS55YJR044C OGG1P53397 376 aaPredicted RBP1.6□□□□□ -2.15
VPS55YJR044C YKU80Q04437 629 aa1.6□□□□□ -2.15
VPS55YJR044C SNO4Q04902 237 aa1.6□□□□□ -2.15
VPS55YJR044C ECI1Q05871 280 aa1.6□□□□□ -2.15
VPS55YJR044C AAD4Q07747 329 aa1.6□□□□□ -2.15
VPS55YJR044C HSP33Q08914 237 aaKnown RBP1.6□□□□□ -2.15
VPS55YJR044C HSP32Q08992 237 aa1.6□□□□□ -2.15
VPS55YJR044C ICL2Q12031 575 aa1.6□□□□□ -2.15
VPS55YJR044C RCN2Q12044 265 aa1.6□□□□□ -2.15
VPS55YJR044C DAP1Q12091 152 aa1.6□□□□□ -2.15
VPS55YJR044C SCM3Q12334 223 aa1.6□□□□□ -2.15
VPS55YJR044C YBR255C-AQ3E776 120 aa1.6□□□□□ -2.15
VPS55YJR044C YBR126W-AQ8TGU7 68 aa1.6□□□□□ -2.15
VPS55YJR044C SEM1O94742 89 aa1.59□□□□□ -2.15
VPS55YJR044C ATP2P00830 511 aaKnown RBP1.59□□□□□ -2.15
VPS55YJR044C HOM3P10869 527 aa1.59□□□□□ -2.15
VPS55YJR044C PCT1P13259 424 aa1.59□□□□□ -2.15
VPS55YJR044C REC107P21651 314 aa1.59□□□□□ -2.15
VPS55YJR044C YCR006CP25350 157 aa1.59□□□□□ -2.15
VPS55YJR044C LSB5P25369 354 aa1.59□□□□□ -2.15
VPS55YJR044C ARP2P32381 391 aaKnown RBP1.59□□□□□ -2.15
VPS55YJR044C SAC6P32599 642 aaKnown RBP1.59□□□□□ -2.15
VPS55YJR044C TOA1P32773 286 aa1.59□□□□□ -2.15
VPS55YJR044C NFU1P32860 256 aa1.59□□□□□ -2.15
VPS55YJR044C HES1P35843 434 aa1.59□□□□□ -2.15
VPS55YJR044C REG2P38232 338 aa1.59□□□□□ -2.15
VPS55YJR044C UTP9P38882 575 aaKnown RBP1.59□□□□□ -2.15
VPS55YJR044C RTS1P38903 757 aa1.59□□□□□ -2.15
VPS55YJR044C PFK26P40433 827 aaKnown RBP1.59□□□□□ -2.15
VPS55YJR044C DPH1P40487 425 aaKnown RBP1.59□□□□□ -2.15
VPS55YJR044C SSU1P41930 458 aa1.59□□□□□ -2.15
VPS55YJR044C BNA1P47096 177 aa1.59□□□□□ -2.15
VPS55YJR044C ATP22P50273 684 aaPredicted RBP1.59□□□□□ -2.15
VPS55YJR044C ASE1P50275 885 aa1.59□□□□□ -2.15
VPS55YJR044C TAM41P53230 385 aa1.59□□□□□ -2.15
VPS55YJR044C APJ1P53940 528 aa1.59□□□□□ -2.15
VPS55YJR044C TIM10P87108 93 aa1.59□□□□□ -2.15
VPS55YJR044C MFB1Q04922 465 aa1.59□□□□□ -2.15
VPS55YJR044C CIA1Q05583 330 aa1.59□□□□□ -2.15
VPS55YJR044C SDH5Q08230 162 aa1.59□□□□□ -2.15
VPS55YJR044C TCO89Q08921 799 aa1.59□□□□□ -2.15
VPS55YJR044C BSC1Q12140 328 aa1.59□□□□□ -2.15
VPS55YJR044C HIF1Q12373 385 aa1.59□□□□□ -2.15
VPS55YJR044C CKA1P15790 372 aa1.58□□□□□ -2.16
VPS55YJR044C SPO16P17122 198 aa1.58□□□□□ -2.16
VPS55YJR044C CLB3P24870 427 aa1.58□□□□□ -2.16
VPS55YJR044C OCA4P25366 362 aa1.58□□□□□ -2.16
VPS55YJR044C SGF29P25554 259 aa1.58□□□□□ -2.16
VPS55YJR044C FRD1P32614 470 aaKnown RBP1.58□□□□□ -2.16
VPS55YJR044C SWH1P35845 1188 aa1.58□□□□□ -2.16
VPS55YJR044C APE3P37302 537 aaKnown RBP1.58□□□□□ -2.16
VPS55YJR044C YBR138CP38277 524 aa1.58□□□□□ -2.16
VPS55YJR044C DOT5P40553 215 aa1.58□□□□□ -2.16
VPS55YJR044C ATG27P46989 271 aa1.58□□□□□ -2.16
VPS55YJR044C UBX6P47049 396 aa1.58□□□□□ -2.16
VPS55YJR044C UPF3P48412 387 aaKnown RBP1.58□□□□□ -2.16
VPS55YJR044C UBP8P50102 471 aa1.58□□□□□ -2.16
VPS55YJR044C IMA1P53051 589 aa1.58□□□□□ -2.16
VPS55YJR044C DUO1P53168 247 aaKnown RBP1.58□□□□□ -2.16
VPS55YJR044C BTN2P53286 410 aa1.58□□□□□ -2.16
VPS55YJR044C REG1Q00816 1014 aa1.58□□□□□ -2.16
VPS55YJR044C MEH1Q02205 184 aa1.58□□□□□ -2.16
VPS55YJR044C MTG1Q03151 367 aaPredicted RBP1.58□□□□□ -2.16
VPS55YJR044C YMR155WQ03795 547 aa1.58□□□□□ -2.16
VPS55YJR044C YDR109CQ04585 715 aa1.58□□□□□ -2.16
VPS55YJR044C SWF1Q04629 336 aa1.58□□□□□ -2.16
VPS55YJR044C CTI6Q08923 506 aa1.58□□□□□ -2.16
VPS55YJR044C CYB2P00175 591 aa1.57□□□□□ -2.16
VPS55YJR044C STF1P01098 86 aa1.57□□□□□ -2.16
VPS55YJR044C ARG3P05150 338 aa1.57□□□□□ -2.16
VPS55YJR044C MET17P06106 444 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-LR1P0C2J4 438 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-FP0CX61 438 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-GR2P0CX62 438 aa1.57□□□□□ -2.16
VPS55YJR044C CBS2P14905 389 aa1.57□□□□□ -2.16
VPS55YJR044C MET8P15807 274 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-CP25383 438 aa1.57□□□□□ -2.16
VPS55YJR044C LDB16P25587 256 aa1.57□□□□□ -2.16
VPS55YJR044C URK1P27515 501 aa1.57□□□□□ -2.16
VPS55YJR044C TRS65P32893 560 aa1.57□□□□□ -2.16
VPS55YJR044C RPS0AP32905 252 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C RIM2P38127 377 aa1.57□□□□□ -2.16
VPS55YJR044C YBR225WP38321 900 aa1.57□□□□□ -2.16
VPS55YJR044C FUN12P39730 1002 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C JEM1P40358 645 aa1.57□□□□□ -2.16
VPS55YJR044C MKT1P40850 830 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C IRC6P43615 237 aa1.57□□□□□ -2.16
VPS55YJR044C ARC1P46672 376 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C YJL055WP47044 245 aa1.57□□□□□ -2.16
VPS55YJR044C MSY1P48527 492 aa1.57□□□□□ -2.16
VPS55YJR044C DSD1P53095 428 aa1.57□□□□□ -2.16
VPS55YJR044C ART5P53244 586 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C ADE16P54113 591 aaKnown RBP1.57□□□□□ -2.16
VPS55YJR044C RMT2Q03305 412 aa1.57□□□□□ -2.16
VPS55YJR044C TY2A-DR2Q03483 438 aa1.57□□□□□ -2.16
VPS55YJR044C RAD30Q04049 632 aa1.57□□□□□ -2.16
VPS55YJR044C TAF11Q04226 346 aa1.57□□□□□ -2.16
Retrieved 100 of 5,963 RNA–protein pairs in 15.5 ms