RNA–Protein interactions for RNA: YJR040W

GEF1, Transcript of Voltage-gated chloride channel, yeastyeast

Gene GEF1, Length 2,340 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
GEF1YJR040W SPP1Q03012 353 aa6.33□□□□□ -1.4
GEF1YJR040W ENT4Q07872 247 aa6.33□□□□□ -1.4
GEF1YJR040W NTG2Q08214 380 aa6.33□□□□□ -1.4
GEF1YJR040W THI20Q08224 551 aa6.33□□□□□ -1.4
GEF1YJR040W LEA1Q08963 238 aaPredicted RBP6.33□□□□□ -1.4
GEF1YJR040W YDL109CQ12103 647 aa6.33□□□□□ -1.4
GEF1YJR040W YLL056CQ12177 298 aa6.33□□□□□ -1.4
GEF1YJR040W HRT3Q12347 344 aa6.33□□□□□ -1.4
GEF1YJR040W YBR298C-AQ8TGK4 73 aa6.33□□□□□ -1.4
GEF1YJR040W GPM1P00950 247 aaKnown RBP6.32□□□□□ -1.4
GEF1YJR040W VPS33P20795 691 aa6.32□□□□□ -1.4
GEF1YJR040W AMS1P22855 1083 aa6.32□□□□□ -1.4
GEF1YJR040W DOM34P33309 386 aa6.32□□□□□ -1.4
GEF1YJR040W YHL012WP38709 493 aa6.32□□□□□ -1.4
GEF1YJR040W LSM12P38828 187 aaKnown RBP6.32□□□□□ -1.4
GEF1YJR040W ARC1P46672 376 aaKnown RBP6.32□□□□□ -1.4
GEF1YJR040W ZRG17P53735 605 aa6.32□□□□□ -1.4
GEF1YJR040W SLT2Q00772 484 aa6.32□□□□□ -1.4
GEF1YJR040W AIM32Q04689 311 aa6.32□□□□□ -1.4
GEF1YJR040W SGT1Q08446 395 aa6.32□□□□□ -1.4
GEF1YJR040W LDB17Q12342 491 aa6.32□□□□□ -1.4
GEF1YJR040W KCS1Q12494 1050 aa6.32□□□□□ -1.4
GEF1YJR040W PUT2P07275 575 aa6.32□□□□□ -1.4
GEF1YJR040W YAP1P19880 650 aaKnown RBP6.32□□□□□ -1.4
GEF1YJR040W PGS1P25578 521 aa6.32□□□□□ -1.4
GEF1YJR040W RAD27P26793 382 aa6.32□□□□□ -1.4
GEF1YJR040W PEX3P28795 441 aa6.32□□□□□ -1.4
GEF1YJR040W HEM12P32347 362 aaPredicted RBP6.32□□□□□ -1.4
GEF1YJR040W NUP2P32499 720 aa6.32□□□□□ -1.4
GEF1YJR040W TSA1P34760 196 aaKnown RBP6.32□□□□□ -1.4
GEF1YJR040W GLG1P36143 616 aa6.32□□□□□ -1.4
GEF1YJR040W STB5P38699 743 aa6.32□□□□□ -1.4
GEF1YJR040W GUF1P46943 645 aa6.32□□□□□ -1.4
GEF1YJR040W MNN11P46985 422 aaKnown RBP6.32□□□□□ -1.4
GEF1YJR040W RCF2P53721 224 aa6.32□□□□□ -1.4
GEF1YJR040W HXT15P54854 567 aa6.32□□□□□ -1.4
GEF1YJR040W YPL191CQ08930 360 aa6.32□□□□□ -1.4
GEF1YJR040W THI21Q08975 551 aa6.32□□□□□ -1.4
GEF1YJR040W THP3Q12049 470 aaKnown RBP6.32□□□□□ -1.4
GEF1YJR040W STE2D6VTK4 431 aa6.31□□□□□ -1.4
GEF1YJR040W RHO1P06780 209 aaKnown RBP6.31□□□□□ -1.4
GEF1YJR040W HMG1P12683 1054 aa6.31□□□□□ -1.4
GEF1YJR040W PHA2P32452 334 aa6.31□□□□□ -1.4
GEF1YJR040W DSS4P32601 143 aa6.31□□□□□ -1.4
GEF1YJR040W RFS1P38234 210 aaKnown RBP6.31□□□□□ -1.4
GEF1YJR040W MTG2P38860 518 aa6.31□□□□□ -1.4
GEF1YJR040W VMA7P39111 118 aa6.31□□□□□ -1.4
GEF1YJR040W FHL1P39521 936 aa6.31□□□□□ -1.4
GEF1YJR040W SER3P40054 469 aa6.31□□□□□ -1.4
GEF1YJR040W PHB1P40961 287 aa6.31□□□□□ -1.4
GEF1YJR040W MSS2P40990 351 aa6.31□□□□□ -1.4
GEF1YJR040W MAF1P41910 395 aa6.31□□□□□ -1.4
GEF1YJR040W BIR1P47134 954 aa6.31□□□□□ -1.4
GEF1YJR040W PEX10Q05568 337 aa6.31□□□□□ -1.4
GEF1YJR040W RCL1Q08096 367 aaPredicted RBP6.31□□□□□ -1.4
GEF1YJR040W FLC1Q08967 793 aa6.31□□□□□ -1.4
GEF1YJR040W HER1Q12276 1246 aa6.31□□□□□ -1.4
GEF1YJR040W HSP42Q12329 375 aa6.31□□□□□ -1.4
GEF1YJR040W YMR030W-AQ3E760 96 aa6.31□□□□□ -1.4
GEF1YJR040W CCP1P00431 361 aa6.31□□□□□ -1.4
GEF1YJR040W PAB1P04147 577 aaKnown RBP RIP-Chip data6.31□□□□□ -1.4not detected
GEF1YJR040W YCL068CP25593 260 aa6.31□□□□□ -1.4
GEF1YJR040W SYN8P31377 255 aa6.31□□□□□ -1.4
GEF1YJR040W UTR2P32623 467 aa6.31□□□□□ -1.4
GEF1YJR040W UGP1P32861 499 aaKnown RBP6.31□□□□□ -1.4
GEF1YJR040W TYE7P33122 291 aaPredicted RBP6.31□□□□□ -1.4
GEF1YJR040W STB6P36085 766 aa6.31□□□□□ -1.4
GEF1YJR040W HSL7P38274 827 aa6.31□□□□□ -1.4
GEF1YJR040W BZZ1P38822 633 aa6.31□□□□□ -1.4
GEF1YJR040W YHR219WP38900 624 aa6.31□□□□□ -1.4
GEF1YJR040W YGR127WP53275 312 aa6.31□□□□□ -1.4
GEF1YJR040W CEG1Q01159 459 aaPredicted RBP6.31□□□□□ -1.4
GEF1YJR040W TAF11Q04226 346 aa6.31□□□□□ -1.4
GEF1YJR040W GRX8Q05926 109 aa6.31□□□□□ -1.4
GEF1YJR040W YCS4Q06156 1176 aa6.31□□□□□ -1.4
GEF1YJR040W CAR1P00812 333 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W PBS2P08018 668 aa6.3□□□□□ -1.4
GEF1YJR040W ERR1P0CX10 437 aa6.3□□□□□ -1.4
GEF1YJR040W ERR2P0CX11 437 aa6.3□□□□□ -1.4
GEF1YJR040W RED1P14291 827 aa6.3□□□□□ -1.4
GEF1YJR040W PHO81P17442 1178 aa6.3□□□□□ -1.4
GEF1YJR040W PEX1P24004 1043 aa6.3□□□□□ -1.4
GEF1YJR040W NGG1P32494 702 aa6.3□□□□□ -1.4
GEF1YJR040W PTC1P35182 281 aa6.3□□□□□ -1.4
GEF1YJR040W MDJ1P35191 511 aa6.3□□□□□ -1.4
GEF1YJR040W SDH8P38345 138 aa6.3□□□□□ -1.4
GEF1YJR040W SAF1P38352 637 aa6.3□□□□□ -1.4
GEF1YJR040W CRP1P38845 465 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W NMD3P38861 518 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W PRM9P39551 298 aa6.3□□□□□ -1.4
GEF1YJR040W YRB2P40517 327 aa6.3□□□□□ -1.4
GEF1YJR040W ERR3P42222 437 aa6.3□□□□□ -1.4
GEF1YJR040W RAI1P53063 387 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W MPS2P53159 387 aa6.3□□□□□ -1.4
GEF1YJR040W YGR283CP53336 341 aaPredicted RBP6.3□□□□□ -1.4
GEF1YJR040W CUS2P53830 285 aaPredicted RBP6.3□□□□□ -1.4
GEF1YJR040W CSN9Q03981 162 aa6.3□□□□□ -1.4
GEF1YJR040W EMI2Q04409 500 aaKnown RBP6.3□□□□□ -1.4
GEF1YJR040W FMP45Q07651 309 aa6.3□□□□□ -1.4
GEF1YJR040W TPO1Q07824 586 aa6.3□□□□□ -1.4
Retrieved 100 of 5,963 RNA–protein pairs in 32 ms