RNA–Protein interactions for RNA: YJL001W

PRE3, Transcript of Beta 1 subunit of the 20S proteasome, yeastyeast

Gene PRE3, Length 648 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE3YJL001W TCB2P48231 1178 aa6.25□□□□□ -1.41
PRE3YJL001W SPC105P53148 917 aa6.25□□□□□ -1.41
PRE3YJL001W TEP1P53916 434 aa6.25□□□□□ -1.41
PRE3YJL001W YMR018WQ04364 514 aa6.25□□□□□ -1.41
PRE3YJL001W ERV41Q04651 352 aa6.25□□□□□ -1.41
PRE3YJL001W PUF3Q07807 879 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
PRE3YJL001W YLL032CQ07834 825 aaKnown RBP RIP-Chip data6.25□□□□□ -1.41not detected
PRE3YJL001W NBA1Q08229 501 aaKnown RBP6.25□□□□□ -1.41
PRE3YJL001W TUB1P09733 447 aaKnown RBP6.24□□□□□ -1.41
PRE3YJL001W CLC1P17891 233 aa6.24□□□□□ -1.41
PRE3YJL001W PPH21P23594 369 aa6.24□□□□□ -1.41
PRE3YJL001W YKL050CP35736 922 aa6.24□□□□□ -1.41
PRE3YJL001W YKR078WP36158 585 aaKnown RBP6.24□□□□□ -1.41
PRE3YJL001W TAT1P38085 619 aa6.24□□□□□ -1.41
PRE3YJL001W YOL073CQ08232 322 aa6.24□□□□□ -1.41
PRE3YJL001W YCK2P23292 546 aaKnown RBP6.23□□□□□ -1.41
PRE3YJL001W HXT3P32466 567 aaKnown RBP6.23□□□□□ -1.41
PRE3YJL001W SPC29P33419 253 aa6.23□□□□□ -1.41
PRE3YJL001W TSL1P38427 1098 aaKnown RBP6.23□□□□□ -1.41
PRE3YJL001W YHL041WP38730 149 aa6.23□□□□□ -1.41
PRE3YJL001W LRP1P38801 184 aaKnown RBP6.23□□□□□ -1.41
PRE3YJL001W AIM18P38884 321 aa6.23□□□□□ -1.41
PRE3YJL001W ATM1P40416 690 aa6.23□□□□□ -1.41
PRE3YJL001W MNN11P46985 422 aaKnown RBP6.23□□□□□ -1.41
PRE3YJL001W HXT16P47185 567 aa6.23□□□□□ -1.41
PRE3YJL001W PCL10P53124 433 aa6.23□□□□□ -1.41
PRE3YJL001W YNL040WP53960 456 aaPredicted RBP6.23□□□□□ -1.41
PRE3YJL001W RSC58Q07979 502 aa6.23□□□□□ -1.41
PRE3YJL001W VPS68Q12016 184 aa6.23□□□□□ -1.41
PRE3YJL001W EFG1Q3E705 233 aaKnown RBP6.23□□□□□ -1.41
PRE3YJL001W COX5AP00424 153 aa6.22□□□□□ -1.41
PRE3YJL001W RBK1P25332 333 aa6.22□□□□□ -1.41
PRE3YJL001W BEM1P29366 551 aa6.22□□□□□ -1.41
PRE3YJL001W SEC65P29478 273 aa6.22□□□□□ -1.41
PRE3YJL001W COQ2P32378 372 aa6.22□□□□□ -1.41
PRE3YJL001W BIT2P38346 545 aa6.22□□□□□ -1.41
PRE3YJL001W GIC1P38785 314 aa6.22□□□□□ -1.41
PRE3YJL001W CCT6P39079 546 aa6.22□□□□□ -1.41
PRE3YJL001W KHA1P40309 873 aa6.22□□□□□ -1.41
PRE3YJL001W IST3P40565 148 aaPredicted RBP6.22□□□□□ -1.41
PRE3YJL001W SIP4P46954 829 aa6.22□□□□□ -1.41
PRE3YJL001W STR3P53101 465 aaKnown RBP6.22□□□□□ -1.41
PRE3YJL001W SWC4P53201 476 aa6.22□□□□□ -1.41
PRE3YJL001W VPS9P54787 451 aa6.22□□□□□ -1.41
PRE3YJL001W UME1Q03010 460 aa6.22□□□□□ -1.41
PRE3YJL001W RSM10Q03201 203 aa6.22□□□□□ -1.41
PRE3YJL001W UFO1Q04511 668 aa6.22□□□□□ -1.41
PRE3YJL001W PGC1Q08959 321 aa6.22□□□□□ -1.41
PRE3YJL001W SEC39Q12745 709 aa6.22□□□□□ -1.41
PRE3YJL001W GFA1P14742 717 aaKnown RBP6.21□□□□□ -1.42
PRE3YJL001W SCL1P21243 252 aaKnown RBP6.21□□□□□ -1.42
PRE3YJL001W RNQ1P25367 405 aa6.21□□□□□ -1.42
PRE3YJL001W FUN30P31380 1131 aa6.21□□□□□ -1.42
PRE3YJL001W SPR1P32603 445 aa6.21□□□□□ -1.42
PRE3YJL001W JNM1P36224 373 aa6.21□□□□□ -1.42
PRE3YJL001W SRP72P38688 640 aaKnown RBP6.21□□□□□ -1.42
PRE3YJL001W MSR1P38714 643 aa6.21□□□□□ -1.42
PRE3YJL001W CFD1P40558 293 aa6.21□□□□□ -1.42
PRE3YJL001W BUD13P46947 266 aaPredicted RBP6.21□□□□□ -1.42
PRE3YJL001W PMT3P47190 753 aa6.21□□□□□ -1.42
PRE3YJL001W NIT3P49954 291 aa6.21□□□□□ -1.42
PRE3YJL001W DAM1P53267 343 aa6.21□□□□□ -1.42
PRE3YJL001W TIM13P53299 105 aa6.21□□□□□ -1.42
PRE3YJL001W YNL247WP53852 767 aaKnown RBP6.21□□□□□ -1.42
PRE3YJL001W YNL143CP53908 130 aa6.21□□□□□ -1.42
PRE3YJL001W REG1Q00816 1014 aa6.21□□□□□ -1.42
PRE3YJL001W ARG7Q04728 441 aa6.21□□□□□ -1.42
PRE3YJL001W STP3Q05937 343 aa6.21□□□□□ -1.42
PRE3YJL001W HBT1Q07653 1046 aaKnown RBP6.21□□□□□ -1.42
PRE3YJL001W TPO1Q07824 586 aa6.21□□□□□ -1.42
PRE3YJL001W ENV7Q12003 364 aa6.21□□□□□ -1.42
PRE3YJL001W YPR089WO13585 888 aa6.2□□□□□ -1.42
PRE3YJL001W CDC9P04819 755 aa6.2□□□□□ -1.42
PRE3YJL001W RED1P14291 827 aa6.2□□□□□ -1.42
PRE3YJL001W UBA1P22515 1024 aaKnown RBP6.2□□□□□ -1.42
PRE3YJL001W YCR015CP25616 317 aa6.2□□□□□ -1.42
PRE3YJL001W RFA2P26754 273 aaKnown RBP6.2□□□□□ -1.42
PRE3YJL001W MRS6P32864 603 aaKnown RBP6.2□□□□□ -1.42
PRE3YJL001W EMC3P36039 253 aa6.2□□□□□ -1.42
PRE3YJL001W IML3P38265 245 aa6.2□□□□□ -1.42
PRE3YJL001W PEX7P39108 375 aa6.2□□□□□ -1.42
PRE3YJL001W TIM17P39515 158 aa6.2□□□□□ -1.42
PRE3YJL001W YAL037WP39728 267 aa6.2□□□□□ -1.42
PRE3YJL001W PTI1P39927 425 aaPredicted RBP6.2□□□□□ -1.42
PRE3YJL001W RPH1P39956 796 aa6.2□□□□□ -1.42
PRE3YJL001W ELO3P40319 345 aa6.2□□□□□ -1.42
PRE3YJL001W MKT1P40850 830 aaKnown RBP6.2□□□□□ -1.42
PRE3YJL001W ZIM17P42844 174 aa6.2□□□□□ -1.42
PRE3YJL001W RFX1P48743 811 aa6.2□□□□□ -1.42
PRE3YJL001W COG1P53079 417 aa6.2□□□□□ -1.42
PRE3YJL001W YGR127WP53275 312 aa6.2□□□□□ -1.42
PRE3YJL001W EGD1Q02642 157 aaKnown RBP6.2□□□□□ -1.42
PRE3YJL001W ENT5Q03769 411 aaKnown RBP6.2□□□□□ -1.42
PRE3YJL001W YPR196WQ06595 470 aa6.2□□□□□ -1.42
PRE3YJL001W YLR001CQ07895 862 aa6.2□□□□□ -1.42
PRE3YJL001W PLB3Q08108 686 aa6.2□□□□□ -1.42
PRE3YJL001W TRM8Q12009 286 aa6.2□□□□□ -1.42
PRE3YJL001W FRE7Q12333 620 aa6.2□□□□□ -1.42
PRE3YJL001W NSI1Q12457 570 aa6.2□□□□□ -1.42
PRE3YJL001W SEY1Q99287 776 aa6.2□□□□□ -1.42
Retrieved 100 of 5,963 RNA–protein pairs in 12.7 ms