RNA–Protein interactions for RNA: YIL017C

VID28, Transcript of GID Complex subunit, serves as adaptor for regulatory subunit Vid24p, yeast

Gene VID28, Length 2,766 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
VID28	YIL017C	PTR2	P32901	601 aa		4.08	□□□□□ -1.76
VID28	YIL017C	MKS1	P34072	584 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YBR056W	P38081	501 aa		4.08	□□□□□ -1.76
VID28	YIL017C	RIM4	P38741	713 aa		4.08	□□□□□ -1.76
VID28	YIL017C	ASG1	P40467	964 aa		4.08	□□□□□ -1.76
VID28	YIL017C	SNZ3	P43545	298 aa		4.08	□□□□□ -1.76
VID28	YIL017C	MNN5	P46982	586 aa		4.08	□□□□□ -1.76
VID28	YIL017C	LYS4	P49367	693 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	MRK1	P50873	501 aa		4.08	□□□□□ -1.76
VID28	YIL017C	DIA3	P52290	468 aa		4.08	□□□□□ -1.76
VID28	YIL017C	MAL11	P53048	616 aa		4.08	□□□□□ -1.76
VID28	YIL017C	RAI1	P53063	387 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	SNZ2	P53824	298 aa		4.08	□□□□□ -1.76
VID28	YIL017C	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.08	□□□□□ -1.76	not detected
VID28	YIL017C	DID2	P69771	204 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YDR541C	Q03049	344 aa		4.08	□□□□□ -1.76
VID28	YIL017C	ARP10	Q04549	284 aa		4.08	□□□□□ -1.76
VID28	YIL017C	SKI7	Q08491	747 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	HRK1	Q08732	759 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	APM4	Q99186	491 aa		4.08	□□□□□ -1.76
VID28	YIL017C	BI2	P03873	423 aa		4.08	□□□□□ -1.76
VID28	YIL017C	MSS18	P08593	268 aa		4.08	□□□□□ -1.76
VID28	YIL017C	GAL3	P13045	520 aa		4.08	□□□□□ -1.76
VID28	YIL017C	VPS33	P20795	691 aa		4.08	□□□□□ -1.76
VID28	YIL017C	PHO91	P27514	894 aa		4.08	□□□□□ -1.76
VID28	YIL017C	COQ2	P32378	372 aa		4.08	□□□□□ -1.76
VID28	YIL017C	HBS1	P32769	611 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	PTM1	P32857	523 aa		4.08	□□□□□ -1.76
VID28	YIL017C	PEX6	P33760	1030 aa		4.08	□□□□□ -1.76
VID28	YIL017C	RRN3	P36070	627 aa		4.08	□□□□□ -1.76
VID28	YIL017C	APM2	P38700	605 aa		4.08	□□□□□ -1.76
VID28	YIL017C	PES4	P39684	611 aa		4.08	□□□□□ -1.76
VID28	YIL017C	VAC8	P39968	578 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YER034W	P40022	185 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	NDE1	P40215	560 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YFR018C	P43599	363 aa		4.08	□□□□□ -1.76
VID28	YIL017C	STB4	P50104	949 aa		4.08	□□□□□ -1.76
VID28	YIL017C	CWC23	P52868	283 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	MNP1	P53163	194 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	UTP8	P53276	713 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	CAF40	P53829	373 aa		4.08	□□□□□ -1.76
VID28	YIL017C	SDH1	Q00711	640 aa		4.08	□□□□□ -1.76
VID28	YIL017C	RSN1	Q03516	953 aa		4.08	□□□□□ -1.76
VID28	YIL017C	DUS3	Q06053	668 aa	Known RBP	4.08	□□□□□ -1.76
VID28	YIL017C	CUR1	Q06469	252 aa		4.08	□□□□□ -1.76
VID28	YIL017C	YLR413W	Q06689	675 aa		4.08	□□□□□ -1.76
VID28	YIL017C	GRS2	Q06817	618 aa		4.08	□□□□□ -1.76
VID28	YIL017C	ASR1	Q06834	288 aa		4.08	□□□□□ -1.76
VID28	YIL017C	BDS1	Q08347	646 aa		4.08	□□□□□ -1.76
VID28	YIL017C	ESA1	Q08649	445 aa		4.08	□□□□□ -1.76
VID28	YIL017C	FLC1	Q08967	793 aa		4.08	□□□□□ -1.76
VID28	YIL017C	PSY3	Q12318	242 aa		4.08	□□□□□ -1.76
VID28	YIL017C	HSH49	Q99181	213 aa	Predicted RBP	4.08	□□□□□ -1.76
VID28	YIL017C	FKS1	P38631	1876 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	COX4	P04037	155 aa		4.07	□□□□□ -1.76
VID28	YIL017C	GAL10	P04397	699 aa		4.07	□□□□□ -1.76
VID28	YIL017C	SEC53	P07283	254 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	CAP2	P13517	287 aa		4.07	□□□□□ -1.76
VID28	YIL017C	CMP2	P14747	604 aa		4.07	□□□□□ -1.76
VID28	YIL017C	NSP1	P14907	823 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	UGA1	P17649	471 aa		4.07	□□□□□ -1.76
VID28	YIL017C	SAT4	P25333	603 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	CTR86	P25355	563 aa		4.07	□□□□□ -1.76
VID28	YIL017C	VMA3	P25515	160 aa		4.07	□□□□□ -1.76
VID28	YIL017C	DAL1	P32375	460 aa		4.07	□□□□□ -1.76
VID28	YIL017C	ASF2	P32448	525 aa	Predicted RBP	4.07	□□□□□ -1.76
VID28	YIL017C	AEP1	P32493	518 aa		4.07	□□□□□ -1.76
VID28	YIL017C	SKG1	P36169	355 aa		4.07	□□□□□ -1.76
VID28	YIL017C	APE4	P38821	490 aa		4.07	□□□□□ -1.76
VID28	YIL017C	KEL1	P38853	1164 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	TAT2	P38967	592 aa		4.07	□□□□□ -1.76
VID28	YIL017C	RPS26A	P39938	119 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	RPS26B	P39939	119 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	YMR147W	P40218	223 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	YTA12	P40341	825 aa		4.07	□□□□□ -1.76
VID28	YIL017C	TOS3	P43637	560 aa		4.07	□□□□□ -1.76
VID28	YIL017C	RPE1	P46969	238 aa		4.07	□□□□□ -1.76
VID28	YIL017C	YJL181W	P46987	611 aa		4.07	□□□□□ -1.76
VID28	YIL017C	HLJ1	P48353	224 aa		4.07	□□□□□ -1.76
VID28	YIL017C	CTR1	P49573	406 aa		4.07	□□□□□ -1.76
VID28	YIL017C	HXT11	P54862	567 aa		4.07	□□□□□ -1.76
VID28	YIL017C	YPL107W	Q02873	248 aa		4.07	□□□□□ -1.76
VID28	YIL017C	ARX1	Q03862	593 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	SLM3	Q12093	417 aa		4.07	□□□□□ -1.76
VID28	YIL017C	EST1	P17214	699 aa	Predicted RBP	4.07	□□□□□ -1.76
VID28	YIL017C	YCK1	P23291	538 aa		4.07	□□□□□ -1.76
VID28	YIL017C	CWH43	P25618	953 aa		4.07	□□□□□ -1.76
VID28	YIL017C	DBF4	P32325	704 aa		4.07	□□□□□ -1.76
VID28	YIL017C	BEM3	P32873	1128 aa		4.07	□□□□□ -1.76
VID28	YIL017C	ABZ1	P37254	787 aa	Predicted RBP	4.07	□□□□□ -1.76
VID28	YIL017C	ALG3	P38179	458 aa		4.07	□□□□□ -1.76
VID28	YIL017C	NMD3	P38861	518 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	HRB1	P38922	454 aa	Known RBP RIP-Chip data	4.07	□□□□□ -1.76	not detected
VID28	YIL017C	VPS45	P38932	577 aa		4.07	□□□□□ -1.76
VID28	YIL017C	GEM1	P39722	662 aa		4.07	□□□□□ -1.76
VID28	YIL017C	PHM8	P40025	321 aa		4.07	□□□□□ -1.76
VID28	YIL017C	MAD3	P47074	515 aa		4.07	□□□□□ -1.76
VID28	YIL017C	SUT1	P53032	299 aa	Known RBP	4.07	□□□□□ -1.76
VID28	YIL017C	SLD3	P53135	668 aa		4.07	□□□□□ -1.76
VID28	YIL017C	TPO2	P53283	614 aa		4.07	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 20.5 ms