RNA–Protein interactions for RNA: YGR116W

SPT6, Transcript of Nucleosome remodeling protein, yeastyeast

Gene SPT6, Length 4,356 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPT6YGR116W ADE5,7P07244 802 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W YKU70P32807 602 aa3.66□□□□□ -1.82
SPT6YGR116W PTC1P35182 281 aa3.66□□□□□ -1.82
SPT6YGR116W YMC2P38087 329 aa3.66□□□□□ -1.82
SPT6YGR116W YER034WP40022 185 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W MGS1P40151 587 aa3.66□□□□□ -1.82
SPT6YGR116W RTT101P47050 842 aa3.66□□□□□ -1.82
SPT6YGR116W ASN1P49089 572 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W TOM22P49334 152 aa3.66□□□□□ -1.82
SPT6YGR116W BSC2Q05611 235 aa3.66□□□□□ -1.82
SPT6YGR116W VTA1Q06263 330 aa3.66□□□□□ -1.82
SPT6YGR116W YPR1Q12458 312 aa3.66□□□□□ -1.82
SPT6YGR116W PFK27Q12471 397 aaPredicted RBP3.66□□□□□ -1.82
SPT6YGR116W RPB4P20433 221 aaPredicted RBP3.66□□□□□ -1.82
SPT6YGR116W DBP3P20447 523 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W RPL24BP24000 155 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W ATG22P25568 528 aa3.66□□□□□ -1.82
SPT6YGR116W DAL1P32375 460 aa3.66□□□□□ -1.82
SPT6YGR116W GCD11P32481 527 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W IPI1P38803 334 aaPredicted RBP3.66□□□□□ -1.82
SPT6YGR116W YHR218WP38899 603 aa3.66□□□□□ -1.82
SPT6YGR116W YAR028WP39548 234 aa3.66□□□□□ -1.82
SPT6YGR116W PRM2P40534 656 aa3.66□□□□□ -1.82
SPT6YGR116W KEL2P50090 882 aa3.66□□□□□ -1.82
SPT6YGR116W MET13P53128 600 aa3.66□□□□□ -1.82
SPT6YGR116W MPS2P53159 387 aa3.66□□□□□ -1.82
SPT6YGR116W ARE2P53629 642 aaKnown RBP3.66□□□□□ -1.82
SPT6YGR116W RAD33Q04231 177 aa3.66□□□□□ -1.82
SPT6YGR116W DUS4Q06063 367 aa3.66□□□□□ -1.82
SPT6YGR116W SWA2Q06677 668 aa3.66□□□□□ -1.82
SPT6YGR116W YNG1Q08465 219 aa3.66□□□□□ -1.82
SPT6YGR116W HFI1Q12060 488 aa3.66□□□□□ -1.82
SPT6YGR116W IPP1P00817 287 aaKnown RBP3.65□□□□□ -1.82
SPT6YGR116W RPS7AP26786 190 aaKnown RBP3.65□□□□□ -1.82
SPT6YGR116W SRP101P32916 621 aa3.65□□□□□ -1.82
SPT6YGR116W YKL100CP34248 587 aa3.65□□□□□ -1.82
SPT6YGR116W APN2P38207 520 aa3.65□□□□□ -1.82
SPT6YGR116W STP2P38704 541 aa3.65□□□□□ -1.82
SPT6YGR116W NDT80P38830 627 aa3.65□□□□□ -1.82
SPT6YGR116W LYS9P38999 446 aa3.65□□□□□ -1.82
SPT6YGR116W FHL1P39521 936 aa3.65□□□□□ -1.82
SPT6YGR116W GUS1P46655 708 aaKnown RBP RIP-Chip data3.65□□□□□ -1.82not detected
SPT6YGR116W YGL036WP53185 909 aaPredicted RBP3.65□□□□□ -1.82
SPT6YGR116W YGR053CP53234 283 aa3.65□□□□□ -1.82
SPT6YGR116W GTR2P53290 341 aa3.65□□□□□ -1.82
SPT6YGR116W HXT15P54854 567 aa3.65□□□□□ -1.82
SPT6YGR116W YOL019WQ08157 551 aa3.65□□□□□ -1.82
SPT6YGR116W NRT1Q08485 598 aa3.65□□□□□ -1.82
SPT6YGR116W RRG1Q12167 365 aaPredicted RBP3.65□□□□□ -1.82
SPT6YGR116W SNU23Q12368 194 aaPredicted RBP3.65□□□□□ -1.82
SPT6YGR116W FMP16Q12497 93 aa3.65□□□□□ -1.82
SPT6YGR116W PHO81P17442 1178 aa3.65□□□□□ -1.82
SPT6YGR116W UGA1P17649 471 aa3.65□□□□□ -1.82
SPT6YGR116W KGD2P19262 463 aaPredicted RBP3.65□□□□□ -1.82
SPT6YGR116W YCR090CP25654 182 aaKnown RBP3.65□□□□□ -1.82
SPT6YGR116W TAF14P35189 244 aa3.65□□□□□ -1.82
SPT6YGR116W UBP11P36026 717 aa3.65□□□□□ -1.82
SPT6YGR116W TFA2P36145 328 aa3.65□□□□□ -1.82
SPT6YGR116W FAD1P38913 306 aa3.65□□□□□ -1.82
SPT6YGR116W IPT1P38954 527 aa3.65□□□□□ -1.82
SPT6YGR116W GCD10P41814 478 aa3.65□□□□□ -1.82
SPT6YGR116W SER2P42941 309 aa3.65□□□□□ -1.82
SPT6YGR116W MNN5P46982 586 aa3.65□□□□□ -1.82
SPT6YGR116W MDV1P47025 714 aa3.65□□□□□ -1.82
SPT6YGR116W ASN2P49090 572 aaKnown RBP3.65□□□□□ -1.82
SPT6YGR116W AIF1P52923 378 aa3.65□□□□□ -1.82
SPT6YGR116W PUS2P53167 370 aa3.65□□□□□ -1.82
SPT6YGR116W DBP6P53734 629 aaKnown RBP3.65□□□□□ -1.82
SPT6YGR116W FYV6P53913 173 aa3.65□□□□□ -1.82
SPT6YGR116W SMA1Q02651 245 aa3.65□□□□□ -1.82
SPT6YGR116W YMR099CQ03161 297 aaKnown RBP3.65□□□□□ -1.82
SPT6YGR116W NHP10Q03435 203 aa3.65□□□□□ -1.82
SPT6YGR116W CSN9Q03981 162 aa3.65□□□□□ -1.82
SPT6YGR116W YLR455WQ06188 304 aa3.65□□□□□ -1.82
SPT6YGR116W YDL109CQ12103 647 aa3.65□□□□□ -1.82
SPT6YGR116W HUA2Q12134 243 aa3.65□□□□□ -1.82
SPT6YGR116W RPN6Q12377 434 aa3.65□□□□□ -1.82
SPT6YGR116W SKM1Q12469 655 aa3.65□□□□□ -1.82
SPT6YGR116W TRP3P00937 484 aa3.65□□□□□ -1.83
SPT6YGR116W GAL10P04397 699 aa3.65□□□□□ -1.83
SPT6YGR116W PMA1P05030 918 aaKnown RBP3.65□□□□□ -1.83
SPT6YGR116W KIN2P13186 1147 aaKnown RBP3.65□□□□□ -1.83
SPT6YGR116W ATP12P22135 325 aa3.65□□□□□ -1.83
SPT6YGR116W SGV1P23293 657 aaKnown RBP3.65□□□□□ -1.83
SPT6YGR116W DBR1P24309 405 aaKnown RBP3.65□□□□□ -1.83
SPT6YGR116W GID7P25569 745 aa3.65□□□□□ -1.83
SPT6YGR116W MNN2P38069 597 aa3.65□□□□□ -1.83
SPT6YGR116W ECM8P38246 354 aa3.65□□□□□ -1.83
SPT6YGR116W ARN2P38724 620 aa3.65□□□□□ -1.83
SPT6YGR116W SPF1P39986 1215 aaKnown RBP3.65□□□□□ -1.83
SPT6YGR116W PHM8P40025 321 aa3.65□□□□□ -1.83
SPT6YGR116W HMF1P40037 129 aaKnown RBP3.65□□□□□ -1.83
SPT6YGR116W YMR160WQ03823 816 aa3.65□□□□□ -1.83
SPT6YGR116W COX20Q04935 205 aa3.65□□□□□ -1.83
SPT6YGR116W GRS2Q06817 618 aa3.65□□□□□ -1.83
SPT6YGR116W WHI4Q07655 649 aaKnown RBP3.65□□□□□ -1.83
SPT6YGR116W YMR030W-AQ3E760 96 aa3.65□□□□□ -1.83
SPT6YGR116W YBR298C-AQ8TGK4 73 aa3.65□□□□□ -1.83
SPT6YGR116W IZH4Q99393 312 aa3.65□□□□□ -1.83
SPT6YGR116W FKS1P38631 1876 aaKnown RBP3.65□□□□□ -1.83
Retrieved 100 of 5,963 RNA–protein pairs in 15.8 ms