RNA–Protein interactions for RNA: YGR013W

SNU71, Transcript of Component of U1 snRNP required for mRNA splicing via spliceosome, yeastyeast

Gene SNU71, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU71YGR013W MNN2P38069 597 aa6.7□□□□□ -1.34
SNU71YGR013W AGP2P38090 596 aa6.7□□□□□ -1.34
SNU71YGR013W RRT2P38332 387 aa6.7□□□□□ -1.34
SNU71YGR013W AFG3P39925 761 aa6.7□□□□□ -1.34
SNU71YGR013W YGR079WP53249 370 aa6.7□□□□□ -1.34
SNU71YGR013W YGR111WP53265 400 aa6.7□□□□□ -1.34
SNU71YGR013W VPS62P53285 467 aa6.7□□□□□ -1.34
SNU71YGR013W ERV25P54837 211 aaKnown RBP6.7□□□□□ -1.34
SNU71YGR013W IZH3Q07959 543 aa6.7□□□□□ -1.34
SNU71YGR013W CEX1Q12453 761 aa6.7□□□□□ -1.34
SNU71YGR013W TPK2P06245 380 aa6.69□□□□□ -1.34
SNU71YGR013W PHO84P25297 587 aaKnown RBP6.69□□□□□ -1.34
SNU71YGR013W MRE11P32829 692 aa6.69□□□□□ -1.34
SNU71YGR013W SEF1P34228 1148 aa6.69□□□□□ -1.34
SNU71YGR013W TCD2P36101 447 aaKnown RBP6.69□□□□□ -1.34
SNU71YGR013W YSW1P38280 609 aa6.69□□□□□ -1.34
SNU71YGR013W SDH8P38345 138 aa6.69□□□□□ -1.34
SNU71YGR013W ETP1P38748 585 aaKnown RBP6.69□□□□□ -1.34
SNU71YGR013W MRX1P40050 688 aa6.69□□□□□ -1.34
SNU71YGR013W OSW5P40219 148 aa6.69□□□□□ -1.34
SNU71YGR013W VID30P53076 958 aa6.69□□□□□ -1.34
SNU71YGR013W FHN1P53279 174 aa6.69□□□□□ -1.34
SNU71YGR013W HEL2Q05580 639 aaKnown RBP6.69□□□□□ -1.34
SNU71YGR013W TDA6Q06466 467 aa6.69□□□□□ -1.34
SNU71YGR013W QCR6P00127 147 aa6.68□□□□□ -1.34
SNU71YGR013W AI1P03875 834 aa6.68□□□□□ -1.34
SNU71YGR013W DAP2P18962 818 aa6.68□□□□□ -1.34
SNU71YGR013W PDE1P22434 369 aa6.68□□□□□ -1.34
SNU71YGR013W SEC66P33754 206 aa6.68□□□□□ -1.34
SNU71YGR013W LTV1P34078 463 aa6.68□□□□□ -1.34
SNU71YGR013W YNG2P38806 282 aaKnown RBP6.68□□□□□ -1.34
SNU71YGR013W ICP55P40051 511 aa6.68□□□□□ -1.34
SNU71YGR013W HXT14P42833 540 aa6.68□□□□□ -1.34
SNU71YGR013W MPS3P47069 682 aa6.68□□□□□ -1.34
SNU71YGR013W INP52P50942 1183 aa6.68□□□□□ -1.34
SNU71YGR013W ERG5P54781 538 aa6.68□□□□□ -1.34
SNU71YGR013W ORC3P54790 616 aa6.68□□□□□ -1.34
SNU71YGR013W SPH1Q06160 661 aa6.68□□□□□ -1.34
SNU71YGR013W DBP9Q06218 594 aaKnown RBP6.68□□□□□ -1.34
SNU71YGR013W RPL3P14126 387 aaKnown RBP6.68□□□□□ -1.34
SNU71YGR013W KAR4P25583 335 aa6.68□□□□□ -1.34
SNU71YGR013W CDC15P27636 974 aa6.68□□□□□ -1.34
SNU71YGR013W SUR1P33300 382 aa6.68□□□□□ -1.34
SNU71YGR013W SWP82P43554 623 aa6.68□□□□□ -1.34
SNU71YGR013W TLG1Q03322 224 aa6.68□□□□□ -1.34
SNU71YGR013W CRN1Q06440 651 aa6.68□□□□□ -1.34
SNU71YGR013W BMS1Q08965 1183 aaKnown RBP6.68□□□□□ -1.34
SNU71YGR013W RLM1Q12224 676 aa6.68□□□□□ -1.34
SNU71YGR013W YLR122CQ12312 125 aa6.68□□□□□ -1.34
SNU71YGR013W YSP3P25036 478 aa6.67□□□□□ -1.34
SNU71YGR013W MVD1P32377 396 aaKnown RBP6.67□□□□□ -1.34
SNU71YGR013W HXT3P32466 567 aaKnown RBP6.67□□□□□ -1.34
SNU71YGR013W PCH2P38126 564 aa6.67□□□□□ -1.34
SNU71YGR013W HRB1P38922 454 aaKnown RBP RIP-Chip data6.67□□□□□ -1.34not detected
SNU71YGR013W IMD4P50094 524 aaKnown RBP6.67□□□□□ -1.34
SNU71YGR013W SHE4P51534 789 aa6.67□□□□□ -1.34
SNU71YGR013W SPC98P53540 846 aa6.67□□□□□ -1.34
SNU71YGR013W BOP3P53958 396 aa6.67□□□□□ -1.34
SNU71YGR013W DUS4Q06063 367 aa6.67□□□□□ -1.34
SNU71YGR013W DCI1Q08558 271 aa6.67□□□□□ -1.34
SNU71YGR013W UAF30Q08747 228 aa6.67□□□□□ -1.34
SNU71YGR013W MDY2Q12285 212 aa6.67□□□□□ -1.34
SNU71YGR013W YER175W-AQ8TGU4 54 aa6.67□□□□□ -1.34
SNU71YGR013W PDR11P40550 1411 aa6.67□□□□□ -1.34
SNU71YGR013W TIF3P34167 436 aaKnown RBP6.66□□□□□ -1.34
SNU71YGR013W VPS41P38959 992 aa6.66□□□□□ -1.34
SNU71YGR013W YIR042CP40586 236 aa6.66□□□□□ -1.34
SNU71YGR013W IRC8P47046 822 aa6.66□□□□□ -1.34
SNU71YGR013W RPS7BP48164 190 aaKnown RBP6.66□□□□□ -1.34
SNU71YGR013W ALT2P52892 507 aa6.66□□□□□ -1.34
SNU71YGR013W YAT1P80235 687 aa6.66□□□□□ -1.34
SNU71YGR013W DON1Q05610 365 aa6.66□□□□□ -1.34
SNU71YGR013W NOP12Q08208 459 aaKnown RBP6.66□□□□□ -1.34
SNU71YGR013W FMP40Q08968 688 aaPredicted RBP6.66□□□□□ -1.34
SNU71YGR013W YDR215CQ12240 137 aa6.66□□□□□ -1.34
SNU71YGR013W PDA1P16387 420 aaKnown RBP6.66□□□□□ -1.34
SNU71YGR013W YFL066CP43538 392 aa6.66□□□□□ -1.34
SNU71YGR013W VTA1Q06263 330 aa6.66□□□□□ -1.34
SNU71YGR013W MRN1Q08925 612 aaKnown RBP RIP-Chip data6.66□□□□□ -1.34not detected
SNU71YGR013W YDL177CQ12257 170 aa6.66□□□□□ -1.34
SNU71YGR013W VMA16P23968 213 aa6.65□□□□□ -1.34
SNU71YGR013W COQ2P32378 372 aa6.65□□□□□ -1.34
SNU71YGR013W RML2P32611 393 aa6.65□□□□□ -1.34
SNU71YGR013W LOT5P34234 306 aa6.65□□□□□ -1.34
SNU71YGR013W MTG2P38860 518 aa6.65□□□□□ -1.34
SNU71YGR013W PKP1P40530 394 aa6.65□□□□□ -1.34
SNU71YGR013W ALF1P53904 254 aa6.65□□□□□ -1.34
SNU71YGR013W DAK1P54838 584 aaKnown RBP6.65□□□□□ -1.34
SNU71YGR013W CLC1P17891 233 aa6.64□□□□□ -1.35
SNU71YGR013W NTH1P32356 751 aa6.64□□□□□ -1.35
SNU71YGR013W YME2P32843 850 aa6.64□□□□□ -1.35
SNU71YGR013W SLM4P38247 162 aa6.64□□□□□ -1.35
SNU71YGR013W MSE1P48525 536 aa6.64□□□□□ -1.35
SNU71YGR013W PDR16P53860 351 aaKnown RBP6.64□□□□□ -1.35
SNU71YGR013W RIA1P53893 1110 aa6.64□□□□□ -1.35
SNU71YGR013W YMR111CQ04461 462 aaPredicted RBP6.64□□□□□ -1.35
SNU71YGR013W MGR3Q04472 501 aa6.64□□□□□ -1.35
SNU71YGR013W PHO92Q06390 306 aa6.64□□□□□ -1.35
SNU71YGR013W MRI1Q06489 411 aaKnown RBP6.64□□□□□ -1.35
SNU71YGR013W RTC5Q12108 567 aaKnown RBP6.64□□□□□ -1.35
Retrieved 100 of 5,963 RNA–protein pairs in 11.5 ms