RNA–Protein interactions for RNA: YER147C

SCC4, Transcript of Subunit of cohesin loading factor (Scc2p-Scc4p), yeast

Gene SCC4, Length 1,875 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SCC4	YER147C	YBR241C	P38142	488 aa		11.88	□□□□□ -0.51
SCC4	YER147C	STB5	P38699	743 aa		11.88	□□□□□ -0.51
SCC4	YER147C	GIP4	P39732	760 aa		11.88	□□□□□ -0.51
SCC4	YER147C	RGI2	P40188	164 aa		11.88	□□□□□ -0.51
SCC4	YER147C	SMP3	Q04174	516 aa		11.88	□□□□□ -0.51
SCC4	YER147C	RIF2	Q06208	395 aa		11.88	□□□□□ -0.51
SCC4	YER147C	MSH5	Q12175	901 aa		11.88	□□□□□ -0.51
SCC4	YER147C	MAM3	Q12296	706 aa		11.88	□□□□□ -0.51
SCC4	YER147C	SUC2	P00724	532 aa		11.87	□□□□□ -0.51
SCC4	YER147C	HSF1	P10961	833 aa		11.87	□□□□□ -0.51
SCC4	YER147C	URE2	P23202	354 aa	Known RBP	11.87	□□□□□ -0.51
SCC4	YER147C	IMP3	P32899	183 aa	Predicted RBP	11.87	□□□□□ -0.51
SCC4	YER147C	ROT2	P38138	954 aa		11.87	□□□□□ -0.51
SCC4	YER147C	ECM13	P38195	257 aa		11.87	□□□□□ -0.51
SCC4	YER147C	AMN1	P38285	549 aa	Predicted RBP	11.87	□□□□□ -0.51
SCC4	YER147C	YBR225W	P38321	900 aa		11.87	□□□□□ -0.51
SCC4	YER147C	SRP72	P38688	640 aa	Known RBP	11.87	□□□□□ -0.51
SCC4	YER147C	YHR202W	P38887	602 aa		11.87	□□□□□ -0.51
SCC4	YER147C	PSF2	P40359	213 aa		11.87	□□□□□ -0.51
SCC4	YER147C	BUD13	P46947	266 aa	Predicted RBP	11.87	□□□□□ -0.51
SCC4	YER147C	SAP4	P53036	818 aa		11.87	□□□□□ -0.51
SCC4	YER147C	GOT1	Q03554	138 aa		11.87	□□□□□ -0.51
SCC4	YER147C	YOL159C	Q08300	171 aa		11.87	□□□□□ -0.51
SCC4	YER147C	UAF30	Q08747	228 aa		11.87	□□□□□ -0.51
SCC4	YER147C	YCK2	P23292	546 aa	Known RBP	11.87	□□□□□ -0.51
SCC4	YER147C	PTP2	P29461	750 aa		11.87	□□□□□ -0.51
SCC4	YER147C	WHI3	P34761	661 aa	Known RBP	11.87	□□□□□ -0.51
SCC4	YER147C	YBR285W	P38354	144 aa		11.87	□□□□□ -0.51
SCC4	YER147C	TRM112	P53738	135 aa	Predicted RBP	11.87	□□□□□ -0.51
SCC4	YER147C	YNL095C	P53932	642 aa		11.87	□□□□□ -0.51
SCC4	YER147C	LOT6	Q07923	191 aa		11.87	□□□□□ -0.51
SCC4	YER147C	SLF1	Q12034	447 aa	Known RBP	11.87	□□□□□ -0.51
SCC4	YER147C	COS2	P0CX12	379 aa		11.86	□□□□□ -0.51
SCC4	YER147C	COS3	P0CX13	379 aa		11.86	□□□□□ -0.51
SCC4	YER147C	FBA1	P14540	359 aa	Known RBP	11.86	□□□□□ -0.51
SCC4	YER147C	PHO3	P24031	467 aa		11.86	□□□□□ -0.51
SCC4	YER147C	POL4	P25615	582 aa		11.86	□□□□□ -0.51
SCC4	YER147C	GUT2	P32191	649 aa		11.86	□□□□□ -0.51
SCC4	YER147C	KAR9	P32526	644 aa		11.86	□□□□□ -0.51
SCC4	YER147C	NPL6	P32832	435 aa		11.86	□□□□□ -0.51
SCC4	YER147C	TFA2	P36145	328 aa		11.86	□□□□□ -0.51
SCC4	YER147C	YBR138C	P38277	524 aa		11.86	□□□□□ -0.51
SCC4	YER147C	ARB1	P40024	610 aa	Known RBP	11.86	□□□□□ -0.51
SCC4	YER147C	YRB1	P41920	201 aa	Known RBP	11.86	□□□□□ -0.51
SCC4	YER147C	COS4	P43542	379 aa		11.86	□□□□□ -0.51
SCC4	YER147C	VPS25	P47142	202 aa		11.86	□□□□□ -0.51
SCC4	YER147C	MTR3	P48240	250 aa	Predicted RBP	11.86	□□□□□ -0.51
SCC4	YER147C	DSL1	P53847	754 aa		11.86	□□□□□ -0.51
SCC4	YER147C	PIR3	Q03180	325 aa		11.86	□□□□□ -0.51
SCC4	YER147C	MMT1	Q03218	510 aa		11.86	□□□□□ -0.51
SCC4	YER147C	GCN5	Q03330	439 aa		11.86	□□□□□ -0.51
SCC4	YER147C	GPB1	Q08886	897 aa		11.86	□□□□□ -0.51
SCC4	YER147C	TIF6	Q12522	245 aa	Known RBP	11.86	□□□□□ -0.51
SCC4	YER147C	YLR149C	Q99296	730 aa		11.86	□□□□□ -0.51
SCC4	YER147C	CLB3	P24870	427 aa		11.85	□□□□□ -0.51
SCC4	YER147C	RPS5	P26783	225 aa	Known RBP	11.85	□□□□□ -0.51
SCC4	YER147C	CIN8	P27895	1000 aa		11.85	□□□□□ -0.51
SCC4	YER147C	FAD1	P38913	306 aa		11.85	□□□□□ -0.51
SCC4	YER147C	ACO2	P39533	789 aa		11.85	□□□□□ -0.51
SCC4	YER147C	SHE4	P51534	789 aa		11.85	□□□□□ -0.51
SCC4	YER147C	MET13	P53128	600 aa		11.85	□□□□□ -0.51
SCC4	YER147C	CLD1	P53264	445 aa		11.85	□□□□□ -0.51
SCC4	YER147C	SVL3	Q03088	825 aa	Known RBP	11.85	□□□□□ -0.51
SCC4	YER147C	YDR239C	Q03780	787 aa		11.85	□□□□□ -0.51
SCC4	YER147C	RCO1	Q04779	684 aa		11.85	□□□□□ -0.51
SCC4	YER147C	IES3	Q12345	250 aa		11.85	□□□□□ -0.51
SCC4	YER147C	THP2	O13539	261 aa	Known RBP	11.85	□□□□□ -0.51
SCC4	YER147C	BRF1	P29056	596 aa		11.85	□□□□□ -0.51
SCC4	YER147C	MF(ALPHA)2	P32435	120 aa		11.85	□□□□□ -0.51
SCC4	YER147C	VPH1	P32563	840 aa	Known RBP	11.85	□□□□□ -0.51
SCC4	YER147C	SEC66	P33754	206 aa		11.85	□□□□□ -0.51
SCC4	YER147C	CTF13	P35203	478 aa		11.85	□□□□□ -0.51
SCC4	YER147C	FTH1	P38310	465 aa		11.85	□□□□□ -0.51
SCC4	YER147C	ARP1	P38696	384 aa		11.85	□□□□□ -0.51
SCC4	YER147C	EFM1	P38732	585 aa		11.85	□□□□□ -0.51
SCC4	YER147C	ELP2	P42935	788 aa		11.85	□□□□□ -0.51
SCC4	YER147C	ICT1	Q12385	394 aa		11.85	□□□□□ -0.51
SCC4	YER147C	RHO1	P06780	209 aa	Known RBP	11.84	□□□□□ -0.51
SCC4	YER147C	MSS116	P15424	664 aa	Known RBP	11.84	□□□□□ -0.51
SCC4	YER147C	FAR1	P21268	830 aa		11.84	□□□□□ -0.51
SCC4	YER147C	DCC1	P25559	380 aa		11.84	□□□□□ -0.51
SCC4	YER147C	FUN30	P31380	1131 aa		11.84	□□□□□ -0.51
SCC4	YER147C	STE14	P32584	239 aa		11.84	□□□□□ -0.51
SCC4	YER147C	SSE2	P32590	693 aa	Known RBP	11.84	□□□□□ -0.51
SCC4	YER147C	TSA1	P34760	196 aa	Known RBP	11.84	□□□□□ -0.51
SCC4	YER147C	CAF4	P36130	643 aa		11.84	□□□□□ -0.51
SCC4	YER147C	SLX1	P38324	304 aa		11.84	□□□□□ -0.51
SCC4	YER147C	APE4	P38821	490 aa		11.84	□□□□□ -0.51
SCC4	YER147C	BST1	P43571	1029 aa		11.84	□□□□□ -0.51
SCC4	YER147C	PET130	P47065	347 aa		11.84	□□□□□ -0.51
SCC4	YER147C	VCX1	Q99385	411 aa		11.84	□□□□□ -0.51
SCC4	YER147C	CBP2	P03874	630 aa	Predicted RBP	11.83	□□□□□ -0.52
SCC4	YER147C	ARG3	P05150	338 aa		11.83	□□□□□ -0.52
SCC4	YER147C	TOP3	P13099	656 aa		11.83	□□□□□ -0.52
SCC4	YER147C	KSS1	P14681	368 aa		11.83	□□□□□ -0.52
SCC4	YER147C	DMC1	P25453	334 aa		11.83	□□□□□ -0.52
SCC4	YER147C	MET22	P32179	357 aa		11.83	□□□□□ -0.52
SCC4	YER147C	TFB1	P32776	642 aa		11.83	□□□□□ -0.52
SCC4	YER147C	COX13	P32799	129 aa		11.83	□□□□□ -0.52
SCC4	YER147C	POL12	P38121	705 aa	Predicted RBP	11.83	□□□□□ -0.52

Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms